EG358337

Overview
NameEG358337
Unique NameEG358337
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length491
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358337 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.402e-16
Identity = 46/159 (28.93%), Postives = 86/159 (54.09%), Query Frame = 3
Query:   33 LMKALSINLGISE-DRLQNAFGGDNIGACLRVNFYPKCPQPDLT----LGLSSHSDPGGLTLLLPDHQVTGLQVRKGDN-WITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPIEPVKELVTEESPSLYPPMTFDE 491
            +++ ++  LGI + + L      +   +C R+N YP CP+        +G   H+DP  +++L   +  +GLQ+   D  W++V P + +F +N+GD +QV++N  +KSV+HRV  ++   R+S+ +F  P     I P+  ++ +    LY   T+ E
Sbjct:  151 VLELMAEGLGIRQRNTLSRLLKDEKSDSCFRLNHYPPCPEVQALNRNLVGFGEHTDPQIISVLR-SNSTSGLQICLTDGTWVSVPPDQTSFFINVGDALQVMTNGRFKSVKHRVLADTTKSRLSMIYFGGPALSENIAPLPSVMLKGEECLYKEFTWCE 308          
BLAST of EG358337 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.392e-16
Identity = 51/141 (36.17%), Postives = 76/141 (53.90%), Query Frame = 3
Query:    6 KELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPIE 428
            +E+ R++  + + L   + +S +  +N F  +N  + LR+N Y          GL  H+D   LT+L  D Q+ GL++     WI+VKP   A  VNIGD  Q LSN  Y+SV HRV   +  ER+S+AFF  P  +  I+
Sbjct:  161 QEIARVAQMICEILGKQVNVSSEYFENIFELEN--SFLRLNKYHPSVFGSEVFGLVPHTDTSFLTILSQD-QIGGLELENNGQWISVKPCLEALTVNIGDMFQALSNGVYQSVRHRVISPANIERMSIAFFVCPYLETEID 298          
BLAST of EG358337 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 6.960e-16
Identity = 48/137 (35.04%), Postives = 76/137 (55.47%), Query Frame = 3
Query:   99 DNIGACL-RVNFYPKCPQPDLT----LGLSSHSDPGGLTLLLPDHQVTGLQVRKGD-NWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPIEPVKELVTEESPSLYPPMTFDE 491
            D    CL RVN YP CP+  +     +G   H+DP  +++L  ++  +G Q+   D +WI+V P   +F +N+GD +QV++N  +KSV HRV  N  + R+S+ +F  P     I P+  L+ +   SLY   T+ E
Sbjct:  169 DKQSDCLFRVNHYPACPELAINGENLIGFGEHTDPQIISILRSNN-TSGFQISLRDGSWISVPPDHSSFFINVGDSLQVMTNGRFKSVRHRVLANGIDPRLSMIYFCGPPLSEKIAPLPSLM-KGKESLYKEFTWFE 303          
BLAST of EG358337 vs. ExPASy Swiss-Prot
Match: G2OX2_PEA (Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.695e-15
Identity = 44/109 (40.37%), Postives = 62/109 (56.88%), Query Frame = 3
Query:  162 LGLSSHSDPGGLTLLLPDHQVTGLQVRKGDN-WITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPIEPVKELVTEESPSLYPPMTF 485
            +G   HSDP  LT+L  ++ V GLQ+      WI V P    F V +GD +QVL+N  + SV HRV  N+   R+S+ +F  P  +  I P+ ++VT  SP LY P T+
Sbjct:  204 IGFGEHSDPQILTILRSNN-VGGLQISTHHGLWIPVPPDPSEFYVMVGDALQVLTNGRFVSVRHRVLTNTTKPRMSMMYFAAPPLNWLISPLSKMVTAHSPCLYRPFTW 311          
BLAST of EG358337 vs. ExPASy Swiss-Prot
Match: ISP7_SCHPO (Sexual differentiation process protein isp7 OS=Schizosaccharomyces pombe GN=isp7 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.774e-11
Identity = 49/163 (30.06%), Postives = 83/163 (50.92%), Query Frame = 3
Query:    9 ELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPIEPVKELVTEESPSLYPPMTFDE 491
            +++  +  +M  L+ +L +S D     F  D   + +R+  YP  P     LG+  H+D   LTL+  D+ V GL++     + +++V PA  A I N+GD + +L+N  YKS  HRV  NS ++R ++ FF     D  + P+  L     PS   P+  ++
Sbjct:  225 QMLAFANHVMSLLAESLELSPDAFDE-FCSDPTTS-IRLLRYPSSPN---RLGVQEHTDADALTLMSQDN-VKGLEILDPVSNCFLSVSPAPGALIANLGDIMAILTNNRYKSSMHRVCNNSGSDRYTIPFFLQGNIDYVVAPLPGL----GPSTAEPIAVED 377          
The following BLAST results are available for this feature:
BLAST of EG358337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
G2OX_PHACN1.402e-1628.93Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]
G2OX7_ARATH2.392e-1636.17Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis th... [more]
G2OX1_PEA6.960e-1635.04Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum ... [more]
G2OX2_PEA7.695e-1540.37Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum ... [more]
ISP7_SCHPO1.774e-1130.06Sexual differentiation process protein isp7 OS=Sch... [more]

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Properties
Property NameValue
Genbank description4h12 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl004h12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358337 ID=EG358337; Name=EG358337; organism=Citrus sinensis; type=EST; length=491bp
ACTGCAAGGAATTGGTGCGACTAAGTGGGAGGTTAATGAAGGCTTTATCG
ATTAATCTTGGAATAAGCGAAGATCGATTACAGAATGCATTTGGTGGTGA
TAATATTGGAGCCTGTTTGAGGGTTAATTTTTATCCAAAGTGTCCGCAGC
CCGACTTAACACTTGGCTTGTCGTCGCATTCGGACCCCGGCGGCTTGACC
CTACTCTTGCCGGACCATCAAGTCACCGGTCTTCAAGTCCGCAAAGGCGA
TAATTGGATCACCGTGAAGCCGGCCAAGCATGCTTTCATCGTCAACATTG
GCGATCAAATTCAGGTTCTAAGCAATGCAAATTACAAGAGCGTGGAGCAC
AGAGTGGCTGTGAATTCAGCAAACGAAAGAGTCTCGCTTGCTTTCTTCTA
CAATCCGAAAAGTGACATCCCAATTGAACCAGTCAAAGAGCTAGTTACAG
AAGAAAGCCCTTCGCTTTATCCGCCAATGACGTTTGATGAG
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