DY306876

Overview
NameDY306876
Unique NameDY306876
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1216
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_STRPG (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=atpA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.475e-15
Identity = 50/135 (37.04%), Postives = 77/135 (57.04%), Query Frame = -2
Query:  460 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDP-DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 858
            L IV+ F+G        + FP +  +  YS +   +  + ++    ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  407 LRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          

HSP 2 Score: 20.7866 bits (42), Expect = 6.475e-15
Identity = 10/21 (47.62%), Postives = 10/21 (47.62%), Query Frame = -1
Query:  836 PGGGFSVPVTSAPP*HCAVFW 898
            PGG  S PVT        VFW
Sbjct:  394 PGGDISEPVTQNTLRIVKVFW 414          
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_STRPF (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=atpA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.475e-15
Identity = 50/135 (37.04%), Postives = 77/135 (57.04%), Query Frame = -2
Query:  460 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDP-DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 858
            L IV+ F+G        + FP +  +  YS +   +  + ++    ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  407 LRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          

HSP 2 Score: 20.7866 bits (42), Expect = 6.475e-15
Identity = 10/21 (47.62%), Postives = 10/21 (47.62%), Query Frame = -1
Query:  836 PGGGFSVPVTSAPP*HCAVFW 898
            PGG  S PVT        VFW
Sbjct:  394 PGGDISEPVTQNTLRIVKVFW 414          
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_STRP8 (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M18 GN=atpA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.475e-15
Identity = 50/135 (37.04%), Postives = 77/135 (57.04%), Query Frame = -2
Query:  460 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDP-DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 858
            L IV+ F+G        + FP +  +  YS +   +  + ++    ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  407 LRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          

HSP 2 Score: 20.7866 bits (42), Expect = 6.475e-15
Identity = 10/21 (47.62%), Postives = 10/21 (47.62%), Query Frame = -1
Query:  836 PGGGFSVPVTSAPP*HCAVFW 898
            PGG  S PVT        VFW
Sbjct:  394 PGGDISEPVTQNTLRIVKVFW 414          
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_STRP6 (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M6 GN=atpA PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 6.475e-15
Identity = 50/135 (37.04%), Postives = 77/135 (57.04%), Query Frame = -2
Query:  460 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDP-DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 858
            L IV+ F+G        + FP +  +  YS +   +  + ++    ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  407 LRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          

HSP 2 Score: 20.7866 bits (42), Expect = 6.475e-15
Identity = 10/21 (47.62%), Postives = 10/21 (47.62%), Query Frame = -1
Query:  836 PGGGFSVPVTSAPP*HCAVFW 898
            PGG  S PVT        VFW
Sbjct:  394 PGGDISEPVTQNTLRIVKVFW 414          
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_STRP1 (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M1 GN=atpA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.475e-15
Identity = 50/135 (37.04%), Postives = 77/135 (57.04%), Query Frame = -2
Query:  460 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDP-DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 858
            L IV+ F+G        + FP +  +  YS +   +  + ++    ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  407 LRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          

HSP 2 Score: 20.7866 bits (42), Expect = 6.475e-15
Identity = 10/21 (47.62%), Postives = 10/21 (47.62%), Query Frame = -1
Query:  836 PGGGFSVPVTSAPP*HCAVFW 898
            PGG  S PVT        VFW
Sbjct:  394 PGGDISEPVTQNTLRIVKVFW 414          
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_METM6 (V-type ATP synthase alpha chain OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=atpA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 7.699e-15
Identity = 55/163 (33.74%), Postives = 90/163 (55.21%), Query Frame = -2
Query:  376 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDP-DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKF 858
            L IV+ F+         + FP +  +  YS +   +  +++Q    D+ ++R +A  +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+   D +C   K   M++ I+ FY     AV KGA  D   I+   +K  +  + Y LV  +F
Sbjct:  406 LRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQQNTAADWRSLRDEAMSLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQDAYHEVDSYCSPIKQYHMLKIIMTFYKKGLDAVAKGA--DPAGISAVTVKGDIARMKY-LVEDEF 565          
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_METMP (V-type ATP synthase alpha chain OS=Methanococcus maripaludis GN=atpA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.240e-14
Identity = 49/139 (35.25%), Postives = 79/139 (56.83%), Query Frame = -2
Query:  448 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDP-DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDG 858
            L IV+ F+         + FP +  +  YS +   +  +++Q    D+ ++R +A  +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+   D +C   K   M++ I+ FY     AV KGA   G
Sbjct:  406 LRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQQNTAADWRSLRDEAMSLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQDAYHEVDSYCSPLKQYNMLKIIMTFYKKGLDAVAKGADPAG 544          
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_CLOD6 (V-type ATP synthase alpha chain OS=Clostridium difficile (strain 630) GN=atpA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.397e-14
Identity = 45/133 (33.83%), Postives = 78/133 (58.65%), Query Frame = -2
Query:  466 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEK 858
            L IV+ F+G       ++ FP +  +  YS +   ++ + ++  + +F   R +A ++LQ E +L EIVQLVG D+L++GD++ LE  + +RED+L QN+F   D +   +K   MM  I+ FY  A  A+++
Sbjct:  406 LRIVKVFWGLDASLAYKRHFPAINWLTSYSLYQEKVDVWADKNVNDNFSAQRAQAMKLLQVESELQEIVQLVGVDSLSDGDRLILEVTRSIREDFLHQNSFHEVDTYTSLHKQYRMMGLILKFYKSAQDAIKQ 538          

HSP 2 Score: 20.7866 bits (42), Expect = 2.397e-14
Identity = 10/21 (47.62%), Postives = 11/21 (52.38%), Query Frame = -1
Query:  836 PGGGFSVPVTSAPP*HCAVFW 898
            PGG  S PV+ A      VFW
Sbjct:  393 PGGDTSEPVSQATLRIVKVFW 413          
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_METM5 (V-type ATP synthase alpha chain OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=atpA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.926e-14
Identity = 49/139 (35.25%), Postives = 79/139 (56.83%), Query Frame = -2
Query:  448 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALE-FFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDG 858
            L IV+ F+         + FP +  +  YS +   +  ++ E    D+ ++R +A  +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+   D +C   K   M++ I+ +Y  A  AV KGA   G
Sbjct:  406 LRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQENTAADWRSLRDEAMTLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQDAYHEVDSYCSPLKQYNMLKIIMTYYTKALDAVAKGADPAG 544          
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_STRPZ (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=atpA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.114e-14
Identity = 49/135 (36.30%), Postives = 76/135 (56.30%), Query Frame = -2
Query:  460 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDP-DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 858
            L IV+ F+G        + FP +  +  YS +   +  + ++    ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++ +  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  407 LRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLIMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          

HSP 2 Score: 20.7866 bits (42), Expect = 3.114e-14
Identity = 10/21 (47.62%), Postives = 10/21 (47.62%), Query Frame = -1
Query:  836 PGGGFSVPVTSAPP*HCAVFW 898
            PGG  S PVT        VFW
Sbjct:  394 PGGDISEPVTQNTLRIVKVFW 414          
The following BLAST results are available for this feature:
BLAST of DY306876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
VATA_STRPG6.475e-1537.04V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRPF6.475e-1537.04V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRP86.475e-1537.04V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRP66.475e-1537.04V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRP16.475e-1537.04V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_METM67.699e-1533.74V-type ATP synthase alpha chain OS=Methanococcus m... [more]
VATA_METMP2.240e-1435.25V-type ATP synthase alpha chain OS=Methanococcus m... [more]
VATA_CLOD62.397e-1433.83V-type ATP synthase alpha chain OS=Clostridium dif... [more]
VATA_METM52.926e-1435.25V-type ATP synthase alpha chain OS=Methanococcus m... [more]
VATA_STRPZ3.114e-1436.30V-type ATP synthase alpha chain OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2DC03RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306876 ID=DY306876; Name=DY306876; organism=Citrus sinensis; type=EST; length=1216bp
GCATAAATACATAAATAAGGATTGGACTTCGAACTTTTGATCACTAGTCA
AAAAAAGGAATTGAGGGAACGACAGGAAGAACAAAAAAATACATAATAGA
ATCAAATTTACCACACTGCAACTAGAAGGCCAAACAAGCACTGCAAAGTG
GCATAACATGGACCCACCAACATTTTGGTTCTCCATTCAATGGAACATTG
AGAAGCCAACTGTTGTTACCGTAAGATCAGAGGTGCCGCTGGGACTACAA
AGAATCTAACTTGACACTTTCAATCATCGAGTTTCATCCTCGAGGGCGCG
GAAACCAGCGGTCAGATCCTCGTGCAGCTTTTTGAATTTAGCAACCAGAG
CTGGTTCTCCTTCTGCTGGGTCCTCAAACTTCTGTGATACTAATCTGTAA
AATAGATCTCCCAGCCGATGCTTGATAAGGGTGTAAGTTATCTTCTGACC
ATCCATACCAGCTCCTTTCTCTACGGCCTGATTGGCCAAGTTATAGAAAT
GGATAATGTTACGCATCATCCAAACAGACTTGTAGAAAGGGCAGAACTTG
TCATATGGAGTAAATGCGTTCTGAGCAAGATAGTCCTCCCTCAAAAGCTT
AGCAGTCTCTAGCGTAATCTTATCTCCTTCAGCCAAAGCATCCTTTCCGA
CAAGTTGCACAATTTCATTCAGGTCATCTTCTCTCTGCAACACCTCTCTA
GCCTTTGTCCTGATGTTAATAAAATCCGGATCAAATTGCTCATAGAAAAA
CTCTAATGCTGTTGAAAAACTCGAGTAAAAATAAACCAGTTTTACGAAAG
GAAAAGGCTTCTCCGCCCAAGTTTCTAATCCAAACCCAAAAAACCGCACA
ATGCTAAGGGGGGGCAGATGTTACAGGAACCGAAAAACCCCCTCCAGGNN
NNNNNNNNNNNNNNNNNNNNNNNNCAAAAAGGAAATCCCAAAAAAATTCC
CCGGGCCCTCCCTTTAACAACCCCCCTGGACGCGGGAAAACCCCCGCCGG
TTACCCACAATTAACCCCCCCTCCGCCCCAATCCCCCCCTTTCCCCACCT
CGGCCAAAAAAAACCAAAAAAAAACCCCCCCACCCCAACTCCCCCCTCCC
CCCCCAAAACTTCCCCCCCCCCCCCGCAAAGGGGCCAAAAAGGGGGAAAA
AAATTTTTAAAAACCCCTTTTTTAAAATTTTTTTTGTTTTAAAAAAAATT
CTCTCTCCCTTTTTTA
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