DY306876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_SULIY (V-type ATP synthase alpha chain OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=atpA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.943e-13 Identity = 54/175 (30.86%), Postives = 86/175 (49.14%), Query Frame = -2 Query: 283 FPFVKLVYFYSSF-STALEFFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDE 804 +P + + +S++ ++ DP + +R L RED+L +IV+LVG ++LAE DK+ LETA+L++E +L QNA+ D F K +MR I F A++ VE+G I I +G L ++ K A + + K+ +L L F LE E Sbjct: 426 YPAINWLQGFSAYVDLVANWWNTNVDPKWREMRDMMVRTLIREDELRQIVRLVGPESLAEKDKLVLETARLIKEAFLKQNAYDDIDAFSSPQKQARVMRLIYLFNTHASRLVERG-------IPTKKIVDSMGQLLPEIIRSK----AAIKNDELNKYDELERKLINVFENLEKE 589 HSP 2 Score: 24.6386 bits (52), Expect = 1.943e-13 Identity = 11/21 (52.38%), Postives = 12/21 (57.14%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG F+ PVTS VFW Sbjct: 394 PGGDFTEPVTSQTLRFVKVFW 414
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_ANADF (V-type ATP synthase alpha chain OS=Anaeromyxobacter sp. (strain Fw109-5) GN=atpA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 7.206e-13 Identity = 52/159 (32.70%), Postives = 86/159 (54.09%), Query Frame = -2 Query: 307 SFSTALE----FFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTA 771 SFS E +F + F +R +A ++LQRE +L E+ +LVG ++L + +++ LE+A+LLRE +L Q+A+ P D CP K++ M+R + + A A+ G + +++++ LG RL S E A G AL A+ + L L A Sbjct: 425 SFSLEAERLRGWFEREAGEGFGALRDEAMKLLQRERELVEVAELVGTESLQDAERLVLESARLLREGFLRQSAYDPVDASCPPRKALEMLRLHLELHGRAVNAIAGGVPL------HSILEAGLGARLLRLGSLPAEAIARGAEALRAELEGLLARLEA 577
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_HALSA (V-type ATP synthase alpha chain OS=Halobacterium salinarium GN=atpA PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.212e-12 Identity = 45/138 (32.61%), Postives = 75/138 (54.35%), Query Frame = -2 Query: 451 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALE-FFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 858 L IV+ F+ + + FP + YS + L+ +F + D+ R A ++L E +L EIVQLVGKDAL E ++TLE A+ +RE +L QNA D++CP K+ ++ I + + +A++ G ++ Sbjct: 407 LRIVKTFWALDSDLAERRHFPAINWDESYSLYKDQLDPWFTDNVVDDWAEQRQWAVDILDEESELEEIVQLVGKDALPEDQQLTLEVARYIREAWLQQNALHDVDRYCPPEKTYAILSGIKTLHEESFEALDAGVPVE 544 HSP 2 Score: 21.557 bits (44), Expect = 1.212e-12 Identity = 10/21 (47.62%), Postives = 10/21 (47.62%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PVT FW Sbjct: 394 PGGDFSEPVTQNTLRIVKTFW 414
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_HALS3 (V-type ATP synthase alpha chain OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=atpA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.212e-12 Identity = 45/138 (32.61%), Postives = 75/138 (54.35%), Query Frame = -2 Query: 451 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALE-FFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 858 L IV+ F+ + + FP + YS + L+ +F + D+ R A ++L E +L EIVQLVGKDAL E ++TLE A+ +RE +L QNA D++CP K+ ++ I + + +A++ G ++ Sbjct: 407 LRIVKTFWALDSDLAERRHFPAINWDESYSLYKDQLDPWFTDNVVDDWAEQRQWAVDILDEESELEEIVQLVGKDALPEDQQLTLEVARYIREAWLQQNALHDVDRYCPPEKTYAILSGIKTLHEESFEALDAGVPVE 544 HSP 2 Score: 21.557 bits (44), Expect = 1.212e-12 Identity = 10/21 (47.62%), Postives = 10/21 (47.62%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PVT FW Sbjct: 394 PGGDFSEPVTQNTLRIVKTFW 414
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_NANEQ (V-type ATP synthase alpha chain OS=Nanoarchaeum equitans GN=atpA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.655e-12 Identity = 36/116 (31.03%), Postives = 67/116 (57.76%), Query Frame = -2 Query: 466 EKPFPFVKLVYFYSSFSTALEFFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEK 813 ++ +P + + Y+ ++ ++E+ D I IR + +L+RE +L +IV +VG DAL++ +KI L +++RE +L Q+AF D + P K++ +MR I +Y Q + K Sbjct: 411 KRHYPAINYLISYTKQWEFVKKYFEELYEDVIEIREEFFAILKRESELMDIVSIVGPDALSDNEKIYLHMGRIIREGFLQQDAFDENDSYSPLEKTIELMRIIHKYYVTVKQLLGK 526 HSP 2 Score: 20.7866 bits (42), Expect = 2.655e-12 Identity = 8/10 (80.00%), Postives = 8/10 (80.00%), Query Frame = -1 Query: 869 PGGGFSVPVT 898 PGG FS PVT Sbjct: 382 PGGDFSEPVT 391
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_CENSY (V-type ATP synthase alpha chain OS=Cenarchaeum symbiosum GN=atpA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.738e-12 Identity = 39/132 (29.55%), Postives = 75/132 (56.82%), Query Frame = -2 Query: 460 IVRFFGFGLETWAEKPFPFVKLVYFYSSFSTAL-EFFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 852 I F+ + + +P + + YS + + +++ E D+++ R++A +LQRED L EIV+L+G +AL + +K+ LE A++++ L QN+F D +C K +++ + FY QA+++GA Sbjct: 411 IKTFWALDAKLAYSRHYPSINWMNSYSGYLADIAKWWGENVSKDWLDTRSEAYGILQREDTLKEIVRLLGPEALPDEEKLILEVARMMKIGLLQQNSFDDVDTYCSPEKQYKLLKMQVDFYKRGQQALKEGA 542
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_CLOBB (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=atpA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.443e-12 Identity = 45/134 (33.58%), Postives = 74/134 (55.22%), Query Frame = -2 Query: 463 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 858 L IV+ F+G + ++ FP + + YS ++ ++ + ++ +R +A +LQ E L EIV+LVG DAL+E D++ L+ AK +REDYL QN F D + K M+ I+ + A +A+E G Sbjct: 406 LRIVKVFWGLDAQLAYQRHFPTINWLTSYSLYADTIDKWMNGNVAENWGALRLEAMTILQDEAQLQEIVRLVGIDALSEKDRLKLDVAKSIREDYLQQNGFHEIDTYTSLKKQYKMLNLILGYRKEAERALEAG 539 HSP 2 Score: 20.4014 bits (41), Expect = 3.443e-12 Identity = 9/21 (42.86%), Postives = 11/21 (52.38%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG S PV+ + VFW Sbjct: 393 PGGDISEPVSQSTLRIVKVFW 413
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_ANASK (V-type ATP synthase alpha chain OS=Anaeromyxobacter sp. (strain K) GN=atpA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.577e-12 Identity = 54/156 (34.62%), Postives = 82/156 (52.56%), Query Frame = -2 Query: 283 FFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDE 750 +F + F +R +AR++LQRE +L E+ +LVG ++L + +++ LE+A+LLRE +L Q+A P D CP K+ M+R + ++ A AV GAG+ + I T LG RL + PA P A L DL+ LE E Sbjct: 437 WFEREAGDGFGALRDEARKLLQRERELAEVAELVGTESLQDAERLVLESARLLREGFLRQSALDPADATCPPAKAFEMLRLFLEWHRRAGAAV--GAGVPLRSILDT----GLGARLLRLA----QLPAAEVPGAAA---ALRADLSEALARLEAE 579
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_ANAD2 (V-type ATP synthase alpha chain OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=atpA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.577e-12 Identity = 54/156 (34.62%), Postives = 82/156 (52.56%), Query Frame = -2 Query: 283 FFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDE 750 +F + F +R +AR++LQRE +L E+ +LVG ++L + +++ LE+A+LLRE +L Q+A P D CP K+ M+R + ++ A AV GAG+ + I T LG RL + PA P A L DL+ LE E Sbjct: 437 WFEREAGDGFGALRDEARKLLQRERELAEVAELVGTESLQDAERLVLESARLLREGFLRQSALDPADATCPPAKAFEMLRLFLEWHRRAGAAV--GAGVPLRSILDT----GLGARLLRLA----QLPAAEVPGAAA---ALRADLSEALARLEAE 579
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_CLOBA (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=atpA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.470e-12 Identity = 45/134 (33.58%), Postives = 74/134 (55.22%), Query Frame = -2 Query: 463 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 858 L IV+ F+G + ++ FP + + YS ++ ++ + ++ +R +A +LQ E L EIV+LVG DAL+E D++ L+ AK +REDYL QN F D + K M+ I+ + A +A+E G Sbjct: 406 LRIVKVFWGLDAQLAYQRHFPTINWLTSYSLYADTIDKWMNGNVAENWGALRLEAMTILQDEAQLQEIVRLVGIDALSEKDRLKLDVAKSIREDYLQQNGFHEIDTYTSLKKQYKMLSLILGYRKEAERALEAG 539 HSP 2 Score: 20.4014 bits (41), Expect = 4.470e-12 Identity = 9/21 (42.86%), Postives = 11/21 (52.38%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG S PV+ + VFW Sbjct: 393 PGGDISEPVSQSTLRIVKVFW 413 The following BLAST results are available for this feature:
BLAST of DY306876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >DY306876 ID=DY306876; Name=DY306876; organism=Citrus sinensis; type=EST; length=1216bpback to top |