DY306876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_THESI (V-type ATP synthase alpha chain OS=Thermococcus sp. (strain KI) GN=atpA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.194e-20 Identity = 59/178 (33.15%), Postives = 100/178 (56.18%), Query Frame = -2 Query: 313 FFGFGLETWAEKPFPFVKLVYFYSSFSTALE-FFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDL 843 F+ + + FP + + YS + A++ ++++ DP++ +R A +LQ+E +L EIV++VG DAL + +K L ++LREDYL Q+AF D +CP K V MMR I++FY QAV++G +D +I ++ ++G + KFE E AL+ + + E+L Sbjct: 411 FWALDADLARRRHFPAINWLRSYSLYVDAIQDWWHKNVDPEWRKMRDTAMALLQKEAELQEIVRIVGPDALPDREKAILIVTRMLREDYLQQDAFDEVDTYCPPKKQVTMMRVILNFYEKTMQAVDRGVPVD--EIAKLPVREKIGRM-------KFEPDVEKVRALIDETNQQFEEL 579 HSP 2 Score: 21.1718 bits (43), Expect = 2.194e-20 Identity = 10/21 (47.62%), Postives = 10/21 (47.62%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PV VFW Sbjct: 392 PGGDFSEPVVQNTLRVVKVFW 412
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_PYRKO (V-type ATP synthase alpha chain OS=Pyrococcus kodakaraensis GN=atpA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.194e-20 Identity = 59/178 (33.15%), Postives = 100/178 (56.18%), Query Frame = -2 Query: 313 FFGFGLETWAEKPFPFVKLVYFYSSFSTALE-FFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDL 843 F+ + + FP + + YS + A++ ++++ DP++ +R A +LQ+E +L EIV++VG DAL + +K L ++LREDYL Q+AF D +CP K V MMR I++FY QAV++G +D +I ++ ++G + KFE E AL+ + + E+L Sbjct: 411 FWALDADLARRRHFPAINWLRSYSLYIDAIQDWWHKNVDPEWRKMRDTAMALLQKEAELQEIVRIVGPDALPDREKAILIVTRMLREDYLQQDAFDEVDTYCPPKKQVTMMRVILNFYEKTMQAVDRGVPVD--EIAKLPVREKIGRM-------KFEPDVEKVRALIDETNQQFEEL 579 HSP 2 Score: 21.1718 bits (43), Expect = 2.194e-20 Identity = 10/21 (47.62%), Postives = 10/21 (47.62%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PV VFW Sbjct: 392 PGGDFSEPVVQNTLRVVKVFW 412
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_THEGJ (V-type ATP synthase alpha chain OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=atpA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.854e-20 Identity = 59/178 (33.15%), Postives = 100/178 (56.18%), Query Frame = -2 Query: 313 FFGFGLETWAEKPFPFVKLVYFYSSFSTALE-FFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDL 843 F+ + + FP + + YS + A++ ++++ DP++ +R A +LQ+E +L EIV++VG DAL + +K L ++LREDYL Q+AF D +CP K V MMR I++FYN +AV++G +D +I ++ ++G + KFE E AL+ + E+L Sbjct: 411 FWALDADLARRRHFPAINWLRSYSLYLDAVQDWWHKNVDPEWRKMRDTAMALLQKEAELQEIVRIVGPDALPDREKAILIVTRMLREDYLQQDAFDEVDTYCPPKKQVTMMRVILNFYNRTMEAVDRGVPVD--EIARLPVREKIGRM-------KFEPDVEKIRALIDETNAQFEEL 579 HSP 2 Score: 21.1718 bits (43), Expect = 2.854e-20 Identity = 10/21 (47.62%), Postives = 10/21 (47.62%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PV VFW Sbjct: 392 PGGDFSEPVVQNTLRVVKVFW 412
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_METBU (V-type ATP synthase alpha chain OS=Methanococcoides burtonii (strain DSM 6242) GN=atpA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.855e-20 Identity = 65/183 (35.52%), Postives = 99/183 (54.10%), Query Frame = -2 Query: 316 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHED 858 L IV+ F+ + + FP + + YS ++ L +Y E D+ +R A ++LQ+E +L EIVQLVG DAL E ++TLE A+++RE +L QNAF P D +CPF K ++++I + LA A+E G M+ KI K L + KFE+ + AL KK+ E+ Sbjct: 400 LRIVKVFWALDAKLSQRRHFPSINWLTSYSLYTQGLADWYSENVGADWTQLRDDAMDLLQQESELQEIVQLVGSDALPEDQQLTLEVARMVREYFLQQNAFHPVDTYCPFDKQYKLLKSITRYGELATAALESGVPMN--KIITIKSKDELAKV-------KFEE--NFDAALDVVMKKMDEE 571 HSP 2 Score: 23.0978 bits (48), Expect = 2.855e-20 Identity = 11/21 (52.38%), Postives = 11/21 (52.38%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PVT VFW Sbjct: 387 PGGDFSEPVTQNTLRIVKVFW 407
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_PYRFU (V-type ATP synthase alpha chain OS=Pyrococcus furiosus GN=atpA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.779e-20 Identity = 59/184 (32.07%), Postives = 101/184 (54.89%), Query Frame = -2 Query: 295 FFGFGLETWAEKPFPFVKLVYFYSSFSTALE-FFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRA 843 F+ + + FP + + YS + A++ ++++ DP++ +R KA E+LQ+E +L EIV++VG DAL E ++ L A++LREDYL Q+AF D +CP K V MMR ++ FY A+ +G + ++I ++ +G + KFE E AL+ K + ++L + A Sbjct: 839 FWALDADLARRRHFPAINWLTSYSLYVDAVQDWWHKNVDPEWRRMRDKAMELLQKEAELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPQKQVTMMRVLMTFYERTMDAISRGVPL--EEIAKLPVREEIGRM-------KFEPDIEKIRALIDKTNEQFDELLKKYGA 1013 HSP 2 Score: 21.1718 bits (43), Expect = 4.779e-20 Identity = 10/21 (47.62%), Postives = 10/21 (47.62%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PV VFW Sbjct: 820 PGGDFSEPVVQNTLRVVKVFW 840
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_METS3 (V-type ATP synthase alpha chain OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=atpA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.279e-20 Identity = 59/160 (36.88%), Postives = 89/160 (55.62%), Query Frame = -2 Query: 337 EKPFPFVKLVYFYSSFSTALEFFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAK 813 ++ FP + + YS + ++E ++ E D+ R +A +LQ+E +L EIVQLVG DAL E D+ TLET ++LRED+L QNAF D +CP K M++ I+ F+ A AV G G+ Q I +K +G + Y + +F E A + K Sbjct: 423 KRHFPSIDWLQSYSLYVDSIEGWWAENVAADWRETRDQAMILLQKESELQEIVQLVGPDALPEADQATLETTRMLREDFLQQNAFDDIDTYCPPVKQYNMLKTILLFHKEALAAV--GRGVPIQNIVALPVKEEIGKMKY-IPQDEFAAKCEEIQAAITK 579 HSP 2 Score: 24.6386 bits (52), Expect = 6.279e-20 Identity = 11/21 (52.38%), Postives = 11/21 (52.38%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG S PVT C VFW Sbjct: 394 PGGDLSEPVTQNTLRICKVFW 414
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_METTH (V-type ATP synthase alpha chain OS=Methanobacterium thermoautotrophicum GN=atpA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.381e-19 Identity = 49/119 (41.18%), Postives = 76/119 (63.87%), Query Frame = -2 Query: 460 EKPFPFVKLVYFYSSFSTAL-EFFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 813 ++ FP + + YS + ++ E++ DP++ R +A +LQ+E +L EIVQLVG DAL + ++ITLET +++RED+L QNA+ D +C K M+R II F+ A A+EKGA Sbjct: 423 KRHFPSIDWLQSYSLYIDSVQEWWASNVDPEWRKFRDEAMALLQKEAELQEIVQLVGPDALPDRERITLETTRMIREDFLQQNAYHEVDTYCSPSKQFEMLRTIIMFHRNATAALEKGA 541 HSP 2 Score: 24.6386 bits (52), Expect = 1.381e-19 Identity = 11/21 (52.38%), Postives = 11/21 (52.38%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG S PVT C VFW Sbjct: 394 PGGDLSEPVTQNTLRICKVFW 414
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_PYRHO (V-type ATP synthase alpha chain OS=Pyrococcus horikoshii GN=atpA PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.779e-19 Identity = 56/178 (31.46%), Postives = 100/178 (56.18%), Query Frame = -2 Query: 313 FFGFGLETWAEKPFPFVKLVYFYSSFSTAL-EFFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDL 843 F+ + + FP + + YS + A+ +++++ DP++ +R KA +LQ+E +L EIV++VG DAL E ++ L A++LREDYL Q+AF D +CP K V MMR +++FY+ +A+ +G + ++I ++ +G + KFE +L+ K + E+L Sbjct: 790 FWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNIDPEWKAMRDKAMALLQKESELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAINRGVPL--EEIAKLPVREEIGRM-------KFERDVSKIRSLIDKTNEQFEEL 958 HSP 2 Score: 21.1718 bits (43), Expect = 1.779e-19 Identity = 10/21 (47.62%), Postives = 10/21 (47.62%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PV VFW Sbjct: 771 PGGDFSEPVVQNTLRVVKVFW 791
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_DESSY (V-type ATP synthase alpha chain OS=Desulfurococcus sp. (strain SY) GN=atpA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.796e-19 Identity = 57/178 (32.02%), Postives = 100/178 (56.18%), Query Frame = -2 Query: 313 FFGFGLETWAEKPFPFVKLVYFYSSFSTALE-FFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDL 843 F+ + + FP + + YS + +++ ++++ DP++ +R A +LQ+E +L EIV++VG DAL + +K L ++LREDYL Q+AF D +CP K V MMR I++FY +AV++G +D +I ++ ++G + KFE E AL+ + + E+L Sbjct: 411 FWALDADLARRRHFPAINWLRSYSLYLDSIQDWWHKNVDPEWRKMRDTAMALLQKEAELQEIVRIVGPDALPDREKAILIVTRMLREDYLQQDAFDEVDTYCPPKKQVTMMRVILNFYERTMEAVDRGVPVD--EIAKLPVREKIGRM-------KFEPDIEKIRALIDETNEQFEEL 579 HSP 2 Score: 21.1718 bits (43), Expect = 1.796e-19 Identity = 10/21 (47.62%), Postives = 10/21 (47.62%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PV VFW Sbjct: 392 PGGDFSEPVVQNTLRVVKVFW 412
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_METB6 (V-type ATP synthase alpha chain OS=Methanoregula boonei (strain 6A8) GN=atpA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 5.137e-19 Identity = 65/191 (34.03%), Postives = 103/191 (53.93%), Query Frame = -2 Query: 292 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRAL 858 L IV+ F+ + + FP + + YS + AL +Y++ PD+ +R+ A VLQ+E +L EIVQLVG DAL E ++IT+E A+++RE +L QNA+ D FC K MM+ I + +LAN A + AG+ +IT K+ L + + + ++ P K+ +D+ A F AL Sbjct: 409 LRIVKVFWALDAKLSQRRHFPAINWLNSYSLYLDALHDWYDKNVSPDWNKLRSWAMGVLQKEAELQEIVQLVGSDALPETEQITIEVARMIREIFLQQNAYDAVDTFCDMQKQYDMMKAIRLYSDLANTA--QAAGVSPAQITTIKAKNELPQIKF---VKDYKQP----------LAKIEKDMDAEFNAL 584 HSP 2 Score: 23.0978 bits (48), Expect = 5.137e-19 Identity = 11/21 (52.38%), Postives = 11/21 (52.38%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PVT VFW Sbjct: 396 PGGDFSEPVTQNTLRIVKVFW 416 The following BLAST results are available for this feature:
BLAST of DY306876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >DY306876 ID=DY306876; Name=DY306876; organism=Citrus sinensis; type=EST; length=1216bpback to top |