DY306876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_METBA (V-type ATP synthase alpha chain OS=Methanosarcina barkeri GN=atpA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 7.527e-17 Identity = 47/134 (35.07%), Postives = 80/134 (59.70%), Query Frame = -2 Query: 463 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTAL-EFFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 858 L IV+ F+ + + FP + + YS + +L ++F + PD++ +R +A E+LQ E +L EIVQLVG DAL + ++ LE ++LRE +L QNAF P D + PF + +++ I+ + + A A++ G Sbjct: 400 LRIVKVFWALDAKLSQRRHFPAINWLNSYSLYKDSLNDWFADNVAPDYVPLRERAMEMLQTESELQEIVQLVGSDALPDDQQLLLEITRMLREIFLQQNAFHPVDAYSPFDQQYKILKAIMKWGDAAMDALKSG 533 HSP 2 Score: 23.0978 bits (48), Expect = 7.527e-17 Identity = 11/21 (52.38%), Postives = 11/21 (52.38%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PVT VFW Sbjct: 387 PGGDFSEPVTQNTLRIVKVFW 407
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_UNCMA (V-type ATP synthase alpha chain OS=Uncultured methanogenic archaeon RC-I GN=atpA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 8.226e-17 Identity = 60/192 (31.25%), Postives = 104/192 (54.17%), Query Frame = -2 Query: 289 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALE 858 L IV+ F+ + + FP + + YS + +L+ +Y++ P++ ++ ++ E+LQRE +L EIVQLVG DAL E ++T+E A+++RE +L QNA+ D +C K + M+++I+ F A A+ G M KI K+ L + KFE + A K+++D+ F++LE Sbjct: 401 LRIVKVFWALDAKLAQRRHFPSINWLNSYSLYQDSLKDWYDKNISPEWNQLKAESMELLQRESELQEIVQLVGSDALPEDQQLTIEIARMIREIFLQQNAYHEVDTYCSLDKQLKMLKSIMQFGAYARTALASGVPM--SKILNLNSKNDLAKV-------KFEANYD------AYLTKVNDDMKKEFKSLE 577
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_THESM (V-type ATP synthase alpha chain OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=atpA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 8.226e-17 Identity = 56/178 (31.46%), Postives = 98/178 (55.06%), Query Frame = -2 Query: 313 FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDL 843 F+ + + FP + + YS + +++ +++ DP++ +R +A +LQ+E +L EIV++VG DAL E +K L A++LREDYL Q+AF D +C K V MMR I++FY +A++ AG+ ++I ++ +G + K+ E L+ K K+ E+L Sbjct: 411 FWALDADLARRRHFPAINWLTSYSLYVDSIKDWWQNNVDPEWKAMRDEAMALLQKESELEEIVRIVGPDALPEREKAILLVARMLREDYLQQDAFHEVDTYCLPKKQVTMMRVILNFYRHTMRAID--AGIPVEEIAKLPVREEIGRM-------KYNPNIEEIAVLMEKTKEQFEEL 579
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_STRPI (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=atpA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.779e-17 Identity = 52/135 (38.52%), Postives = 78/135 (57.78%), Query Frame = -2 Query: 460 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDPDFINIR-TKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 858 L IV+ F+G + FP + + YS + ++ + + + N + T+A LQRE L EIV+LVG D+L+E +++T+E AK +REDYL QNAF D F F K M+ NI+ F + AN A+E G+ Sbjct: 407 LRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDDKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSENERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541 HSP 2 Score: 20.7866 bits (42), Expect = 9.779e-17 Identity = 10/21 (47.62%), Postives = 10/21 (47.62%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG S PVT VFW Sbjct: 394 PGGDISEPVTQNTLRIVKVFW 414
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_METTP (V-type ATP synthase alpha chain OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=atpA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 9.785e-17 Identity = 63/192 (32.81%), Postives = 100/192 (52.08%), Query Frame = -2 Query: 289 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALE 858 L IV+ F+ + FP + + YS + LE +Y E PD+ ++ +A +LQ +L EIV LVG DAL E ++TLE A+++ +LAQ+AF P D FCP+ K +++ I+ + + A A+ +G +D +I K L L R+V + EP L KK+ + + A F AL+ Sbjct: 400 LRIVKVFWALDSRLTQRRHFPSINWLDSYSLYEKDLESWYAENVAPDWNQLKRRAMAILQENAELEEIVMLVGSDALPEDQQLTLEVARMIINFWLAQSAFHPVDTFCPYKKQYDLLKAILTYRDYAFDALRRGVAVD--QIKSVPSKDALAKL--RMVE-------DYEPDL----KKVMDQMKAEFEALK 576 HSP 2 Score: 21.9422 bits (45), Expect = 9.785e-17 Identity = 10/21 (47.62%), Postives = 11/21 (52.38%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG F+ PVT VFW Sbjct: 387 PGGDFTEPVTQNTLRIVKVFW 407
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_CLONN (V-type ATP synthase alpha chain OS=Clostridium novyi (strain NT) GN=atpA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.271e-16 Identity = 51/143 (35.66%), Postives = 87/143 (60.84%), Query Frame = -2 Query: 436 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKIT 858 L IV+ F+G + + FP + + YS + ++ + ++ +++++RT+A +LQ E +L EIV+LVG DAL+E D++ LE AK +REDYL QNAF D + K M++ ++ F + A +A++ AG+ +KIT Sbjct: 405 LRIVKVFWGLDAQLAYRRHFPAINWLNSYSLYLDSIGRWMDRNVSEEWVDLRTRAMTILQEEANLEEIVRLVGIDALSESDRLKLEVAKSIREDYLMQNAFHDVDTYSSLEKQYKMLKLVLSFQDEAERALK--AGVYLEKIT 545 HSP 2 Score: 23.0978 bits (48), Expect = 1.271e-16 Identity = 11/21 (52.38%), Postives = 11/21 (52.38%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG S PVT A VFW Sbjct: 392 PGGDLSEPVTQATLRIVKVFW 412
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: NTPA_ENTHR (V-type sodium ATPase catalytic subunit A OS=Enterococcus hirae GN=ntpA PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.403e-16 Identity = 49/129 (37.98%), Postives = 76/129 (58.91%), Query Frame = -2 Query: 460 FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQF-DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 843 F+G ++ FP + + YS +ST + + +Q D+ ++ T+ +LQ E+ LNEIV+LVG D+L++ D++TLE AK +REDYL QNAF D F K M++ I+ F A +A+ GA Sbjct: 412 FWGLDSSLAQKRHFPSINWIQSYSLYSTEVGRYMDQILQQDWSDMVTEGMRILQEEEQLNEIVRLVGIDSLSDNDRLTLEVAKSIREDYLQQNAFDDVDTFTSREKQFNMLKVILTFGKEARKALSLGA 540
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA3_METHJ (V-type ATP synthase alpha chain 3 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpA3 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.652e-16 Identity = 47/134 (35.07%), Postives = 79/134 (58.96%), Query Frame = -2 Query: 463 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 858 L IV+ F+ + ++ FP + + YS +S ++E+ P+FI ++ + E+LQRE++L EI++LVG + L E D++ L A++LRE YL Q AF +D F K M++ I F++ A +A+E G Sbjct: 408 LRIVKVFWALDADLAYQRHFPAINWLMSYSLYSPIAGIWWEEHIGPEFIRMKQEMMEILQRENELEEIIRLVGPETLPESDRLLLLKAEILRESYLMQYAFDEFDTFTGPKKQYRMLKAIFTFFSQAERALETG 541 HSP 2 Score: 23.0978 bits (48), Expect = 1.652e-16 Identity = 11/21 (52.38%), Postives = 11/21 (52.38%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PVT VFW Sbjct: 395 PGGDFSEPVTQNTLRIVKVFW 415
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_ARCFU (V-type ATP synthase alpha chain OS=Archaeoglobus fulgidus GN=atpA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.653e-16 Identity = 61/190 (32.11%), Postives = 96/190 (50.53%), Query Frame = -2 Query: 313 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSF-STALEFFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG------AGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDL 858 L IV+ F+ + A + FP + + YS + T ++F E ++ +R A EVLQ E +L EIVQLVG DAL E ++ LE A+++RE YL Q A+ P D +C K M++ I + QA+E G AG++G + KFE+ + +PA+ A +K+ ++L Sbjct: 406 LRIVKVFWALDAKLAARRHFPAINWLQSYSLYVDTLKDWFAENVSEEWNELRRWAMEVLQEEANLQEIVQLVGSDALPESQRVLLEVARIIREVYLIQYAYHPVDTYCSVQKQYDMLKAIKQINDWFYQALEAGKTIDEIAGVEGLE---------------EFARAKFEE--DYKPAMEAALEKIRKNL 578 HSP 2 Score: 23.0978 bits (48), Expect = 1.653e-16 Identity = 11/21 (52.38%), Postives = 11/21 (52.38%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PVT VFW Sbjct: 393 PGGDFSEPVTQNTLRIVKVFW 413
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_CLOBM (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=atpA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.147e-16 Identity = 50/134 (37.31%), Postives = 76/134 (56.72%), Query Frame = -2 Query: 463 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALE-FFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 858 L IV+ F+G + + FP + + YS + + + E D+ +RT+A +LQ E +L EIV+LVG DAL+E D++ LE AK LREDYL QNAF D + K M++ ++ FY+ +A+ G Sbjct: 407 LRIVKVFWGLDSQLAYRRHFPAINWLNSYSLYLEKISPWMDENVASDWTALRTRAMSLLQEEANLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLEKQYKMLKLVLFFYDETQRALNAG 540 HSP 2 Score: 23.0978 bits (48), Expect = 2.147e-16 Identity = 11/21 (52.38%), Postives = 11/21 (52.38%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG S PVT A VFW Sbjct: 394 PGGDLSEPVTQATLRIVKVFW 414 The following BLAST results are available for this feature:
BLAST of DY306876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >DY306876 ID=DY306876; Name=DY306876; organism=Citrus sinensis; type=EST; length=1216bpback to top |