EY702778

Overview
NameEY702778
Unique NameEY702778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702778 vs. ExPASy Swiss-Prot
Match: LLDD_YERP3 (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=lldD PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.561e-27
Identity = 79/252 (31.35%), Postives = 113/252 (44.84%), Query Frame = 2
Query:   74 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP---PLKNLEGLLSTKVSSDTGSN---------------------FEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDA 757
            +++  A+  LP   + +  GGA +E TL+ N      I  R R+L ++S + L T +     + P+++ P  L  +    GEV  ARAA        LS  S   IEEVA +     ++QLYV K R      + RA+  G K LV TVD P  G R  D  + M  P     + L+ +   + + D G N                     +        D S+SWKDLEW+R     P++IKGIL  EDA
Sbjct:    8 DYRAAAQRKLPPFLFHYIDGGAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDA 259          

HSP 2 Score: 29.261 bits (64), Expect = 1.561e-27
Identity = 17/37 (45.95%), Postives = 21/37 (56.76%), Query Frame = 1
Query:  763 AVEVGXAGIIVSXSRARQLDYSPATISALEEVXHAVK 873
            AV+ G  GI+VS    RQLD   +T  AL  +  AVK
Sbjct:  262 AVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVK 298          
BLAST of EY702778 vs. ExPASy Swiss-Prot
Match: LLDD_ESCF3 (L-lactate dehydrogenase [cytochrome] OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=lldD PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.868e-27
Identity = 81/253 (32.02%), Postives = 120/253 (47.43%), Query Frame = 2
Query:   71 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITPPLKNLE-----------------------GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDA 757
            ++++  A+  LP   + +  GGA  E+TL+ NVE   ++  R R+L ++S + L TT+ + K+S P+ +AP  L  +    GEV  A AA +      LS  S   IEEVA +     ++QLYV + R      ++RA+  G   LV TVD P  G R  D  + M  P                             G +S  +   TG  ++        D S+SWKDLEW+R   + P++IKGIL  EDA
Sbjct:    7 SDYRAAAQRILPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAGAADAHGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDA 259          
BLAST of EY702778 vs. ExPASy Swiss-Prot
Match: LLDD_CAUCR (L-lactate dehydrogenase [cytochrome] OS=Caulobacter crescentus GN=lldD PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.868e-27
Identity = 81/252 (32.14%), Postives = 118/252 (46.83%), Query Frame = 2
Query:   74 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP---PLKNLEGLLSTKVSSDTG---------------------SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDA 757
            +F+E AR  LP+  +D+  GGA  E T+  N++    I  R R+L+DVS +D STT+   + + P+ +AP  L  +    GE   ARAAA+      LS  S   ++EV A+S    ++QLYV + R     L+ RA   G   LV TVD P  G R  D  + M  P     + ++  L    + D G                      +F        D S+ W DL+W+R     P++IKG+L  EDA
Sbjct:    8 DFREAARRRLPRFLFDYIDGGAYAERTMARNIDDLADIALRQRVLMDVSVVDPSTTLFGVRQALPVALAPVGLTGMYARRGECQAARAAAAKGVPFCLSTVSVCDVDEVRAASATPFWFQLYVLRDRGFMRDLLARASAAGATTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLVQAALKPAWAWDVGVMGHPHRLGNVAPALGKASGLQDFMGWLAANFDPSIQWSDLKWIRDAWKGPLVIKGVLDPEDA 259          
BLAST of EY702778 vs. ExPASy Swiss-Prot
Match: LLDD_CAUCN (L-lactate dehydrogenase [cytochrome] OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=lldD PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.868e-27
Identity = 81/252 (32.14%), Postives = 118/252 (46.83%), Query Frame = 2
Query:   74 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP---PLKNLEGLLSTKVSSDTG---------------------SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDA 757
            +F+E AR  LP+  +D+  GGA  E T+  N++    I  R R+L+DVS +D STT+   + + P+ +AP  L  +    GE   ARAAA+      LS  S   ++EV A+S    ++QLYV + R     L+ RA   G   LV TVD P  G R  D  + M  P     + ++  L    + D G                      +F        D S+ W DL+W+R     P++IKG+L  EDA
Sbjct:    8 DFREAARRRLPRFLFDYIDGGAYAERTMARNIDDLADIALRQRVLMDVSVVDPSTTLFGVRQALPVALAPVGLTGMYARRGECQAARAAAAKGVPFCLSTVSVCDVDEVRAASATPFWFQLYVLRDRGFMRDLLARASAAGATTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLVQAALKPAWAWDVGVMGHPHRLGNVAPALGKASGLQDFMGWLAANFDPSIQWSDLKWIRDAWKGPLVIKGVLDPEDA 259          
BLAST of EY702778 vs. ExPASy Swiss-Prot
Match: LLDD2_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 2 OS=Mycobacterium tuberculosis GN=lldD2 PE=3 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.029e-27
Identity = 80/251 (31.87%), Postives = 126/251 (50.20%), Query Frame = 2
Query:   62 VNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEE-VAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITPPLKNLE-------------GLLSTK----VSSDTGSNFEAD-ANETMDASLSWKDLEWLRSITNLPILIKGILTREDA 757
            + + + + +A+   P+  +D+  GGAEDE ++    + F  I F P IL DV+ +     +L      P  IAPT   +L + EGE+A ARAAA+      LS  ++  IE+ V A     +++QLY+++ RD +  LV+R    GF  +++TVD P  G R  D++N M  PP   L               LL+T+     S D       +  N   D SL++ DL W++S     +++KGI T +DA
Sbjct:   35 LTIQDLRRIAKRRTPRAAFDYADGGAEDELSIARARQGFRDIEFHPTILRDVTTVCAGWNVLGQPTVLPFGIAPTGFTRLMHTEGEIAGARAAAAAGIPFSLSTLATCAIEDLVIAVPQGRKWFQLYMWRDRDRSMALVRRVAAAGFDTMLVTVDVPVAGARLRDVRNGMSIPPALTLRTVLDAMGHPRWWFDLLTTEPLAFASLDRWPGTVGEYLNTVFDPSLTFDDLAWIKSQWPGKLVVKGIQTLDDA 285          

HSP 2 Score: 23.8682 bits (50), Expect = 2.029e-27
Identity = 12/31 (38.71%), Postives = 16/31 (51.61%), Query Frame = 1
Query:  766 VEVGXAGIIVSXSRARQLDYSPATISALEEV 858
            V+ G  GI++S    RQLD +P     L  V
Sbjct:  289 VDRGVDGIVLSNHGGRQLDRAPVPFHLLPHV 319          
BLAST of EY702778 vs. ExPASy Swiss-Prot
Match: LLDD_CITK8 (L-lactate dehydrogenase [cytochrome] OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=lldD PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.439e-27
Identity = 81/253 (32.02%), Postives = 119/253 (47.04%), Query Frame = 2
Query:   71 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITPPLKNLE-----------------------GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDA 757
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R R+L ++S + L TT+ + K+S P+ +AP  L  +    GEV  A AA +      LS  S   IEEVA +     ++QLYV + R      ++RA+  G   LV TVD P  G R  D  + M  P                             G +S  +   TG  ++        D S+SWKDLEW+R   + P++IKGIL  EDA
Sbjct:    7 SDYRAAAQRILPPFLFHYIDGGAYAEYTLRRNVEDLSEVALRQRVLKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAALRRYWQAATHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDA 259          
BLAST of EY702778 vs. ExPASy Swiss-Prot
Match: LLDD_ENT38 (L-lactate dehydrogenase [cytochrome] OS=Enterobacter sp. (strain 638) GN=lldD PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.434e-27
Identity = 81/253 (32.02%), Postives = 120/253 (47.43%), Query Frame = 2
Query:   71 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKM-------------ITPPLKNLE----------GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDA 757
            ++++  A+  LP   + +  GGA  EHTL+ NVE    +  R R+L ++S + L T + +  +S P+ +AP  L  +    GEV  A AA +      LS  S   IEEVA +     ++QLYV + R      ++RA+  G   LV TVD P  G R  D  + M             +T P    +          G +S  +   TG  ++        D S+SWKDLEW+R   + P++IKGIL  EDA
Sbjct:    7 SDYRAAAQRILPPFLFHYIDGGAYSEHTLRRNVEDLSEVALRQRVLKNMSDLSLETKLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADARGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGANAAMRRYWQAVTHPQWAWDVGVNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDA 259          
BLAST of EY702778 vs. ExPASy Swiss-Prot
Match: LLDD_KLEP7 (L-lactate dehydrogenase [cytochrome] OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=lldD PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.098e-27
Identity = 83/253 (32.81%), Postives = 120/253 (47.43%), Query Frame = 2
Query:   71 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKM-------------ITPPLKNLE----------GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDA 757
            ++++  A+  LP   + +  GGA  EHTL+ NVE    +  R RIL ++S + L TT+ + K++ P  +AP  L  +    GEV  A AA        LS  S   IEEVA +     ++QLYV + R      ++RA+  G   LV TVD P  G R  D  + M             +T P    +          G +S  +   TG  ++        D S+SWKDLEW+R   + P++IKGIL  EDA
Sbjct:    7 SDYRAAAQRILPPFLFHYIDGGAYAEHTLRRNVEDLSDVALRQRILRNMSDLSLETTLFNEKLAMPTALAPVGLCGMYARRGEVQAAGAADDKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAALRRYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDA 259          
BLAST of EY702778 vs. ExPASy Swiss-Prot
Match: LLDD_KLEP3 (L-lactate dehydrogenase [cytochrome] OS=Klebsiella pneumoniae (strain 342) GN=lldD PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.098e-27
Identity = 83/253 (32.81%), Postives = 120/253 (47.43%), Query Frame = 2
Query:   71 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKM-------------ITPPLKNLE----------GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDA 757
            ++++  A+  LP   + +  GGA  EHTL+ NVE    +  R RIL ++S + L TT+ + K++ P  +AP  L  +    GEV  A AA        LS  S   IEEVA +     ++QLYV + R      ++RA+  G   LV TVD P  G R  D  + M             +T P    +          G +S  +   TG  ++        D S+SWKDLEW+R   + P++IKGIL  EDA
Sbjct:    7 SDYRAAAQRILPPFLFHYIDGGAYAEHTLRRNVEDLSDVALRQRILRNMSDLSLETTLFNEKLAMPTALAPVGLCGMYARRGEVQAAGAADDKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAALRRYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGQPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDA 259          
BLAST of EY702778 vs. ExPASy Swiss-Prot
Match: LLDD_XANOR (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas oryzae pv. oryzae GN=lldD PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.211e-26
Identity = 83/253 (32.81%), Postives = 120/253 (47.43%), Query Frame = 2
Query:   71 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITPPL---KNLEGLLSTKVSSDTG--------SNFEA-DANET------------MDASLSWKDLEWLRSITNLPILIKGILTREDA 757
            ++++  A+  LP   + +  GGA  EHTL+ NV     +  R R+L ++S + LST +    ++ P+ + P  L  +    GEV  ARAAA+      LS  S   IEEVA +     ++QLYV K R      ++RA+  G   LV TVD P  G R  D  + M  P     + L+ +   + + D G         N  A   N T             D S++WKDLEW+R     P++IKGIL  EDA
Sbjct:    7 SDYRAAAQARLPPFLFHYIDGGAYAEHTLRRNVSDLADVALRQRVLRNMSDLRLSTELFGETLAMPVALGPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAVTHPRWAWDVGVLGKPHDLGNISAYRGNPTGLQDYIGWLGANFDPSIAWKDLEWIREFWTGPMVIKGILDPEDA 259          
The following BLAST results are available for this feature:
BLAST of EY702778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_YERP31.561e-2731.35L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_ESCF31.868e-2732.02L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_CAUCR1.868e-2732.14L-lactate dehydrogenase [cytochrome] OS=Caulobacte... [more]
LLDD_CAUCN1.868e-2732.14L-lactate dehydrogenase [cytochrome] OS=Caulobacte... [more]
LLDD2_MYCTU2.029e-2731.87Putative L-lactate dehydrogenase [cytochrome] 2 OS... [more]
LLDD_CITK82.439e-2732.02L-lactate dehydrogenase [cytochrome] OS=Citrobacte... [more]
LLDD_ENT385.434e-2732.02L-lactate dehydrogenase [cytochrome] OS=Enterobact... [more]
LLDD_KLEP77.098e-2732.81L-lactate dehydrogenase [cytochrome] OS=Klebsiella... [more]
LLDD_KLEP37.098e-2732.81L-lactate dehydrogenase [cytochrome] OS=Klebsiella... [more]
LLDD_XANOR1.211e-2632.81L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-B05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702778 ID=EY702778; Name=EY702778; organism=Citrus sinensis; type=EST; length=875bp
ATTCAGAGATTGTTTTTTTGGGGTGTATTTAGGAATTAGGTTTCAAATGG
CAGCTGAACCTGTTAATTTGAATGAGTTCCAAGAATTGGCAAGGCTGGCC
CTTCCAAAAATGTATTATGATTTCTACGCTGGTGGAGCAGAAGATGAACA
TACCCTAAAAGAGAATGTGGAAGCCTTTCATAGAATTACGTTTCGGCCAA
GAATTCTTGTCGATGTCAGCAGAATAGATTTATCGACTACTATACTTGAT
TACAAAATCTCGGCTCCCATTATCATTGCTCCAACGGCTTTGCATAAGCT
TGCAAACCCTGAAGGAGAGGTAGCCACAGCCAGAGCAGCAGCTTCATGTA
ACACCATAATGGTTTTATCCTTCACATCTAGCAGCACCATAGAGGAGGTT
GCGGCCAGCTCCAATGCTGTTCGCTTCTATCAATTATATGTATTCAAGAA
ACGAGATATAACAGCTACTCTAGTGCAGAGAGCTGAAAGGAATGGTTTTA
AGGCTCTTGTCCTAACTGTTGATACTCCAAGACTTGGTAGAAGGGAGGCA
GATATAAAGAACAAAATGATTACACCGCCGTTGAAGAATTTGGAAGGCCT
CTTATCAACCAAAGTCAGCTCTGATACAGGTTCGAATTTTGAAGCTGATG
CCAATGAGACCATGGATGCTTCTTTAAGTTGGAAGGATTTAGAATGGCTA
AGATCTATTACAAACTTACCAATTTTGATCAAGGGGATACTTACTCGTGA
AGATGCAATAAAGCTGTGGAAGTAGGTNGTGCTGGGATTATTGTCTCCNN
ATCACGAGCTCGACAGTTAGATTATAGTCCTGCCACTATTTCTGCTCTGG
AAGAAGTGGNTCATGCCGTTAAANG
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