DY306159

Overview
NameDY306159
Unique NameDY306159
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1283
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306159 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 3.677e-31
Identity = 74/200 (37.00%), Postives = 117/200 (58.50%), Query Frame = 1
Query:   76 KVKVLGFWCSPFVFRVVWALKLKGVEFEYIEEDVFNKSTRLLELNPVHKKVPVLVHDDKVIVESFVILEYIDETWP-----QDPLLPQDPYEKATARFWAKFADEKLIQTAWKSTW---TKGEEKEDALKATMEALEKIEGEL----KGKSYFGGENKYAYLEIAIGWINYLIPIWEEIASIQFLDPKKLPAITGMISKF 639
            ++K+LG W SP+  RV   L LK + +EY+EE++ +KS  LL  NPVHK VPVL+H  + + ES VI++YIDE WP     +  ++P DPYE+A ARFWA + D+K ++ AW +        EE+  A+   + ALE +EG      KGK +FGG+    ++++ +G         +++   + +DP + PA+     +F
Sbjct:    6 ELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDK-VRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDG-VGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERF 203          
BLAST of DY306159 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 8.191e-31
Identity = 64/159 (40.25%), Postives = 105/159 (66.04%), Query Frame = 1
Query:   67 MATKVKVLGFWCSPFVFRVVWALKLKGVEFEYIEEDVFNKSTRLLELNPVHKKVPVLVHDDKVIVESFVILEYIDETW-PQDPLLPQDPYEKATARFWAKFADEKLIQTAWKSTW-TKGEEKEDALKATMEALEKIEGELKGKSYFGGENKYAYLEIAI 537
            M+ +V +L  W S +  R   AL  KGV +EY EE++ N+S  LL++NP+HKK+PVL+H+ K I ES +I++YIDE W  + PL+P DPY+++ ARFW  + D+K+  T WK  W +KGEE E+  K  +   +++E  L  K ++ G++ + ++++ +
Sbjct:    1 MSDEVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDKKIYDT-WKKMWLSKGEEHEEGKKELISIFKQLEETLTDKPFY-GDDTFGFVDLCL 157          
BLAST of DY306159 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.036e-25
Identity = 67/161 (41.61%), Postives = 94/161 (58.39%), Query Frame = 1
Query:   85 VLGFWCSPFVFRVVWALKLKGVEFEYIEEDVFNKSTRLLELNPVHKKVPVLVHDDKVIVESFVILEYIDETWPQDP-LLP-------QDPYEKATARFWAKFADEKLIQTAWKSTWTKGEEKEDALKATMEALEKIEGELKGKSYF--GGENKYAYLEIAI 537
            +L FW SPF  R   A+  KG+EFEY EED+ NKS  LL  NPVH+K+PVL+H  + + ES VIL+Y+D+ +P  P LLP          Y +ATARFWA + D KL     +    KGE +  A +   E L  +E EL  + +F  GG  +  ++++A+
Sbjct:    9 LLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVAL 169          
BLAST of DY306159 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.015e-25
Identity = 65/161 (40.37%), Postives = 92/161 (57.14%), Query Frame = 1
Query:   85 VLGFWCSPFVFRVVWALKLKGVEFEYIEEDVFNKSTRLLELNPVHKKVPVLVHDDKVIVESFVILEYIDETWPQDPLL--------PQDPYEKATARFWAKFADEKLIQTAWKSTWTKGEEKEDALKATMEALEKIEGELKGKSYF--GGENKYAYLEIAI 537
            +L FW SPF  R   A+  KG+EFEY EED+ NKS  LL  NPVH+K+PVL+H  + + ES VIL+Y+D+ +P  P L            Y +ATARFWA + D KL     +    KGE +  A +   E L  +E EL  + +F  GG  +  ++++A+
Sbjct:    9 LLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVAL 169          
BLAST of DY306159 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.236e-20
Identity = 68/219 (31.05%), Postives = 108/219 (49.32%), Query Frame = 1
Query:   79 VKVLGFWCSPFVFRVVWALKLKGVEFEYIEEDVF-NKSTRLLELNPVHKKVPVLV-HDDKVIVESFVILEYIDETWPQDP-------LLPQDPYEKATARFWAKFADEKL-----IQTAWKSTWTKGEEKEDALKATMEALEKIEGELKGKSYF-GGENKYAYLEIAIGWINYLIPIWEEIASIQFLDPKKLPAITGMISKFLGNPLIKETLQPRDRLV 690
            ++VLG   SPF  R   AL L+GV +E ++E +   KS RLL  NPV+ K+PVL+  D + I ES VI++YI++   +         LLP DPYE+A  RFW  F D+K        +   +   + +  ED   A     E  +    G+++F GG+     L++A+G     +   E +  +  +D    P + G   +F  +P  K  L   +++V
Sbjct:    1 MRVLGGEVSPFTARARLALDLRGVAYELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVV 219          
BLAST of DY306159 vs. ExPASy Swiss-Prot
Match: MAAI_CAEEL (Probable maleylacetoacetate isomerase OS=Caenorhabditis elegans GN=gst-42 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.993e-12
Identity = 41/94 (43.62%), Postives = 59/94 (62.77%), Query Frame = 1
Query:   76 KVKVLGFWCSPFVFRVVWALKLKGVEFEYIEEDVFNKS--TRLLELNPVHKKVPVLVHDDKVIVESFVILEYIDETWPQDPLLPQDPYEKATAR 351
            K  +  +W S   +RV  AL LK V++EY   D+ ++   ++L E+NP   KVP  V D +VI ES  I+EY++ET P  PLLP+DP ++A AR
Sbjct:    5 KPVLYSYWRSSCSWRVRIALALKNVDYEYKTVDLLSEEAKSKLKEINPA-AKVPTFVVDGQVITESLAIIEYLEETHPDVPLLPKDPIKRAHAR 97          
BLAST of DY306159 vs. ExPASy Swiss-Prot
Match: GSTZ1_DIACA (Glutathione S-transferase 1 OS=Dianthus caryophyllus GN=GST1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.226e-11
Identity = 40/92 (43.48%), Postives = 60/92 (65.22%), Query Frame = 1
Query:   76 KVKVLGFWCSPFVFRVVWALKLKGVEFEYIEEDVF---NKSTRLLELNPVHKKVPVLVHDDKVIVESFVILEYIDETWPQDPLLPQDPYEKA 342
            K+++  F  S   +RV  AL LKG++FEY   D+F   + +   L+LNP+   VPVLVH D VI +S  I+ Y++E +P++PLLPQD  ++A
Sbjct:    8 KMQLYSFSLSSCAWRVRIALHLKGLDFEYKAVDLFKGEHLTPEFLKLNPLGY-VPVLVHGDIVIADSLAIIMYLEEKFPENPLLPQDLQKRA 98          
The following BLAST results are available for this feature:
BLAST of DY306159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
GSTU6_ORYSJ3.677e-3137.00Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTX3_SOYBN8.191e-3140.25Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTU1_ORYSJ1.036e-2541.61Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI3.015e-2540.37Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX2_MAIZE2.236e-2031.05Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
MAAI_CAEEL4.993e-1243.62Probable maleylacetoacetate isomerase OS=Caenorhab... [more]
GSTZ1_DIACA4.226e-1143.48Glutathione S-transferase 1 OS=Dianthus caryophyll... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM3DB12RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306159 ID=DY306159; Name=DY306159; organism=Citrus sinensis; type=EST; length=1283bp
GAGAAGTGAGTGTGTGTGTGTGGATAGATCTCACCTCACATTCACAAATC
ACAATAGCAGAAGATTATGGCAACAAAAGTGAAGGTTTTGGGGTTTTGGT
GTAGTCCTTTTGTGTTTAGGGTAGTATGGGCATTGAAGCTAAAGGGTGTT
GAATTTGAATACATTGAAGAAGACGTCTTTAACAAAAGCACCAGGCTTCT
TGAGCTGAACCCAGTTCATAAAAAGGTTCCTGTGCTTGTTCATGATGACA
AAGTGATAGTTGAGTCGTTTGTTATTCTGGAGTACATCGATGAGACATGG
CCACAAGATCCGTTGCTGCCTCAAGATCCTTATGAAAAAGCCACGGCTCG
ATTTTGGGCTAAATTTGCAGATGAAAAGCTGATACAAACTGCATGGAAGT
CAACGTGGACCAAAGGAGAGGAAAAAGAGGATGCTCTGAAAGCAACAATG
GAAGCTTTGGAGAAGATAGAGGGAGAACTCAAAGGAAAAAGCTACTTTGG
AGGAGAGAACAAATATGCGTATTTGGAAATTGCAATTGGATGGATCAATT
ACCTTATACCAATTTGGGAAGAAATTGCATCCATTCAATTTCTTGACCCG
AAGAAACTTCCAGCAATAACTGGCATGATAAGCAAGTTCCTGGGAAACCC
TTTGATCAAAGAAACCCTGCAACCACGGGATAGATTGGTTACCATTTACG
CGAGCGCGTCCAACTATGGAAAAATGCACCTAACAACCGTGAACCGGGAG
GAACCAAACCTGGAGAATTGTTACCTTATGCAATTATTCTTCGCTGAACG
TGTCCCCTTTCTGGGAGGCCGGGAGAATACCCTTCGTTTTTTTTTTTAAA
CCGGGAACATAAAGTCATACAGACACAAGGGGGAGGGANAGAACCTCCAT
ATGAAGAANNAAANGGAAAACGTTNTACCTTATTTTTATTTACAAGGAAA
GATGCATTACCNACNGGGGAGTAACTCGGAACCCCAANTTGATCGCTNCN
NTANCGTAANNAGCACAGTTCCGCTCTGGCTNNATTTTCTCCAGACTTCG
GATNTGAGAACTACAATCGGANNATATAACTTNTNGTCNGGATGCGTTAN
GGGACACANNCCGCCTCANNCNGTAAGANTGGGAGTGTAACAATAACAAC
AAACAGCATCATNCAACCCCTGCGCACCACTAATTTCGCACCAGCGATAC
CCGCGCCGACGAACAGCTAAAAAAGCATAACGTGCAAGGGGTGTAAACAT
TAAGCTGTGACCGAAAGAAATNCTTTATAATGC
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