DY306149
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: ELAV2_MOUSE (ELAV-like protein 2 OS=Mus musculus GN=Elavl2 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.314e-12 Identity = 49/179 (27.37%), Postives = 91/179 (50.84%), Query Frame = 1 Query: 208 QNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHK-GGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMG--RPLRLKF 735 ++ + + V LP + + E+K+LF G + ++++ K G++ + FV P++A+ A+N + + + I+V +A R +SA R+ LYVS L + L + FS ++S+++ + G S G GF+ F + EAE AI L+G++ G P+ +KF Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA---------RPSSASIRDAN--LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF 202
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: ELAV2_HUMAN (ELAV-like protein 2 OS=Homo sapiens GN=ELAVL2 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 1.314e-12 Identity = 49/179 (27.37%), Postives = 91/179 (50.84%), Query Frame = 1 Query: 208 QNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHK-GGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMG--RPLRLKF 735 ++ + + V LP + + E+K+LF G + ++++ K G++ + FV P++A+ A+N + + + I+V +A R +SA R+ LYVS L + L + FS ++S+++ + G S G GF+ F + EAE AI L+G++ G P+ +KF Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA---------RPSSASIRDAN--LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF 202
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: RBM19_HUMAN (Probable RNA-binding protein 19 OS=Homo sapiens GN=RBM19 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.716e-12 Identity = 52/179 (29.05%), Postives = 88/179 (49.16%), Query Frame = 1 Query: 226 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGK----NRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRP--QRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFE--SNEGRSAGYGFVSFATKEEAEAAISSL-DGKELMGRPLRLKF 735 +++ NL + + ++K +F+ GTV I K K + F FV PE+AQ A+ Q V G + V +++ KP R P ++T K+ V N+ ++ S +RE FS F + + + + + G G+GFV F TK++A+ A ++L L GR L L++ Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFS-TFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEW 909
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: ELAV3_HUMAN (ELAV-like protein 3 OS=Homo sapiens GN=ELAVL3 PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 2.241e-12 Identity = 48/176 (27.27%), Postives = 89/176 (50.57%), Query Frame = 1 Query: 217 RRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHK-GGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMG--RPLRLKF 735 + + V LP + + E K+LF G + ++++ K G++ + FV + P +A A+N + ++ + I+V +A R +SA R+ LYVS L + + + FS ++S+++ + G S G GF+ F + EAE AI L+G++ +G P+ +KF Sbjct: 38 KTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYA---------RPSSASIRDAN--LYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKF 202
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: ELAV2_RAT (ELAV-like protein 2 OS=Rattus norvegicus GN=Elavl2 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.241e-12 Identity = 48/168 (28.57%), Postives = 86/168 (51.19%), Query Frame = 1 Query: 241 LPWSFSVAEIKNLFAPCGTVVDVEIIKHK-GGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMG--RPLRLKF 735 LP + + E+K+LF G + ++++ K G++ + FV P++A+ A+N + + + I+V +A R +SA R+ LYVS L + L + FS ++S+++ + G S G GF+ F + EAE AI L+G++ G P+ +KF Sbjct: 46 LPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA---------RPSSASIRDAN--LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF 202
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: NUCL_PONAB (Nucleolin OS=Pongo abelii GN=NCL PE=2 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 2.926e-12 Identity = 47/174 (27.01%), Postives = 95/174 (54.60%), Query Frame = 1 Query: 220 RKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQ 741 + + + NL +S + ++ +F +++ +++ GK++ +AF+ AS E+A+ A+N + +E+ GR IR+E + PR +A + +T L+V LS L+E F + V +++V + G S G+GFV F ++E+A+AA +++ E+ G + L + + Sbjct: 488 KTLVLSNLSYSATEETLQEVFEKA---TFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLE----LQGPRGSPNARSQPSKT---LFVKGLSEDTTEETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAK 648 HSP 2 Score: 70.8626 bits (172), Expect = 1.452e-11 Identity = 56/225 (24.89%), Postives = 107/225 (47.56%), Query Frame = 1 Query: 187 KPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHK-LYVSNLSWKVRSTHLREFF-SANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKF-GQKNDDVSESNKEE----EDVSEDQSAES*LFQFFGGLQ 840 K + ++K+ R + NLP+ + E+K +F + V K GK++ A++ + +A+ + E+ GR I + + + + + R + K L +SNLS+ L+E F A F V ++ G+S GY F+ FA+ E+A+ A++S + +E+ GR +RL+ G + + S + + +SED + E+ F G ++ Sbjct: 384 KGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVS----KDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVP-----QNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVR 599
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: NUCL_MACFA (Nucleolin OS=Macaca fascicularis GN=NCL PE=2 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 2.926e-12 Identity = 47/174 (27.01%), Postives = 95/174 (54.60%), Query Frame = 1 Query: 220 RKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQ 741 + + + NL +S + ++ +F +++ +++ GK++ +AF+ AS E+A+ A+N + +E+ GR IR+E + PR +A + +T L+V LS L+E F + V +++V + G S G+GFV F ++E+A+AA +++ E+ G + L + + Sbjct: 487 KTLVLSNLSYSATEETLQEVFEKA---TFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLE----LQGPRGSPNARSQPSKT---LFVKGLSEDTTEETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAK 647 HSP 2 Score: 70.8626 bits (172), Expect = 1.452e-11 Identity = 56/225 (24.89%), Postives = 107/225 (47.56%), Query Frame = 1 Query: 187 KPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHK-LYVSNLSWKVRSTHLREFF-SANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKF-GQKNDDVSESNKEE----EDVSEDQSAES*LFQFFGGLQ 840 K + ++K+ R + NLP+ + E+K +F + V K GK++ A++ + +A+ + E+ GR I + + + + + R + K L +SNLS+ L+E F A F V ++ G+S GY F+ FA+ E+A+ A++S + +E+ GR +RL+ G + + S + + +SED + E+ F G ++ Sbjct: 383 KGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVS----KDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVP-----QNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVR 598
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: NUCL_HUMAN (Nucleolin OS=Homo sapiens GN=NCL PE=1 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 2.926e-12 Identity = 47/174 (27.01%), Postives = 95/174 (54.60%), Query Frame = 1 Query: 220 RKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQ 741 + + + NL +S + ++ +F +++ +++ GK++ +AF+ AS E+A+ A+N + +E+ GR IR+E + PR +A + +T L+V LS L+E F + V +++V + G S G+GFV F ++E+A+AA +++ E+ G + L + + Sbjct: 486 KTLVLSNLSYSATEETLQEVFEKA---TFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLE----LQGPRGSPNARSQPSKT---LFVKGLSEDTTEETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAK 646 HSP 2 Score: 70.8626 bits (172), Expect = 1.452e-11 Identity = 56/225 (24.89%), Postives = 107/225 (47.56%), Query Frame = 1 Query: 187 KPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHK-LYVSNLSWKVRSTHLREFF-SANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKF-GQKNDDVSESNKEE----EDVSEDQSAES*LFQFFGGLQ 840 K + ++K+ R + NLP+ + E+K +F + V K GK++ A++ + +A+ + E+ GR I + + + + + R + K L +SNLS+ L+E F A F V ++ G+S GY F+ FA+ E+A+ A++S + +E+ GR +RL+ G + + S + + +SED + E+ F G ++ Sbjct: 382 KGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVS----KDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVP-----QNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVR 597
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: ELAV4_RAT (ELAV-like protein 4 OS=Rattus norvegicus GN=Elavl4 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.926e-12 Identity = 58/217 (26.73%), Postives = 101/217 (46.54%), Query Frame = 1 Query: 94 SNSTPSLIYNFPTRNVCLQVCSTLQDTTVQTKPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHK-GGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMG--RPLRLKF 735 SN S N P+ N + C + T T +T + V LP + + E ++LF G + ++++ K G++ + FV P++A+ A+N + + + I+V +A R +SA R+ LYVS L + L + FS ++S+++ + G S G GF+ F + EAE AI L+G++ G P+ +KF Sbjct: 6 SNGPTSNTSNGPSSNN--RNCPSPMQTGAATDDSKTN-------LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA---------RPSSASIRDAN--LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKF 202
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: ELAV4_MOUSE (ELAV-like protein 4 OS=Mus musculus GN=Elavl4 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.926e-12 Identity = 58/217 (26.73%), Postives = 101/217 (46.54%), Query Frame = 1 Query: 94 SNSTPSLIYNFPTRNVCLQVCSTLQDTTVQTKPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHK-GGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMG--RPLRLKF 735 SN S N P+ N + C + T T +T + V LP + + E ++LF G + ++++ K G++ + FV P++A+ A+N + + + I+V +A R +SA R+ LYVS L + L + FS ++S+++ + G S G GF+ F + EAE AI L+G++ G P+ +KF Sbjct: 18 SNGPTSNTSNGPSSNN--RNCPSPMQTGAATDDSKTN-------LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA---------RPSSASIRDAN--LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKF 214 The following BLAST results are available for this feature:
BLAST of DY306149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY306149 ID=DY306149; Name=DY306149; organism=Citrus sinensis; type=EST; length=1055bpback to top |