DY306149
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: ELAV4_HUMAN (ELAV-like protein 4 OS=Homo sapiens GN=ELAVL4 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.926e-12 Identity = 58/217 (26.73%), Postives = 101/217 (46.54%), Query Frame = 1 Query: 94 SNSTPSLIYNFPTRNVCLQVCSTLQDTTVQTKPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHK-GGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMG--RPLRLKF 735 SN S N P+ N + C + T T +T + V LP + + E ++LF G + ++++ K G++ + FV P++A+ A+N + + + I+V +A R +SA R+ LYVS L + L + FS ++S+++ + G S G GF+ F + EAE AI L+G++ G P+ +KF Sbjct: 13 SNGPTSNTSNGPSSNN--RNCPSPMQTGATTDDSKTN-------LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA---------RPSSASIRDAN--LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKF 209
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: PABP_NEOFI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.822e-12 Identity = 44/193 (22.80%), Postives = 94/193 (48.70%), Query Frame = 1 Query: 226 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESNKEEEDVSEDQSA 804 +++ NL + + + FA G ++ ++ + + G ++ + FV + E A A+ + ++ + + V KK R + A T +Y+ N+ +V R+ F F ++S + EG+S G+GFV+F+T + A+AA+ ++ KE+ G+ L + QK + E +++ + + + A Sbjct: 142 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHIS-KKDRQSKFEEMKANFTN--VYIKNIDQEVTDEEFRKMFE-KFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKA 330
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: PABP_ASPFU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.822e-12 Identity = 44/193 (22.80%), Postives = 94/193 (48.70%), Query Frame = 1 Query: 226 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESNKEEEDVSEDQSA 804 +++ NL + + + FA G ++ ++ + + G ++ + FV + E A A+ + ++ + + V KK R + A T +Y+ N+ +V R+ F F ++S + EG+S G+GFV+F+T + A+AA+ ++ KE+ G+ L + QK + E +++ + + + A Sbjct: 142 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHIS-KKDRQSKFEEMKANFTN--VYIKNIDQEVTDEEFRKMFE-KFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKA 330
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: RBM19_MOUSE (Probable RNA-binding protein 19 OS=Mus musculus GN=Rbm19 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.991e-12 Identity = 51/179 (28.49%), Postives = 86/179 (48.04%), Query Frame = 1 Query: 226 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGK----NRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKP--RPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSA--GYGFVSFATKEEAEAAISSL-DGKELMGRPLRLKF 735 +++ NL +S + +K +F+ G + I K K + F FV PE+AQ A+ Q V G + V +++ KP R P ++T K+ V N+ ++ +RE FS F + + + + G A G+GFV F TK++A+ A ++L L GR L L++ Sbjct: 724 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISERATKPALTSTRKKQVPKKQTTSKILVRNIPFQANQREIRELFS-TFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEW 901
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: PABP_ASPTN (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 6.519e-12 Identity = 43/193 (22.28%), Postives = 94/193 (48.70%), Query Frame = 1 Query: 226 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESNKEEEDVSEDQSA 804 +++ NL + + + FA G ++ ++ + + G ++ + FV + E A A+ + ++ + + V KK R + A T +Y+ NL ++ R+ F F ++S + EG+S G+GFV+++T + A+AA+ ++ KE+ G+ L + QK + E +++ + + + A Sbjct: 138 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHIS-KKDRQSKFEEMKANFTN--VYIKNLDQEISEEEFRQMFE-KFGEITSATLSRDQEGKSRGFGFVNYSTHDSAQAAVDEMNDKEVKGQKLYVGRAQKKHEREEELRKQYEAARLEKA 326
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: GAR2_SCHPO (Protein gar2 OS=Schizosaccharomyces pombe GN=gar2 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 6.519e-12 Identity = 49/191 (25.65%), Postives = 90/191 (47.12%), Query Frame = 1 Query: 184 TKPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKH-KGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAK-KFKKPRPQRSASA-----PARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKF 735 TKP Q + ++V L W+ + F GT+V +I + G+++ + +V +PE A+AAV T+E+ GR++ ++ + + P+P A E ++V NLS+ L F + S ++ + GR G+G+V+F+ + A+ + ++G + GRP RL F Sbjct: 253 TKPSQDSNETCT--VFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAANGTKEIDGRMVNLDLSNPRPANPQPYAQQRAGNFGDQLSEPSDTVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCV-EMNGHFIAGRPCRLDF 440
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: PABP_EMENI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 1.112e-11 Identity = 44/193 (22.80%), Postives = 94/193 (48.70%), Query Frame = 1 Query: 226 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESNKEEEDVSEDQSA 804 +++ NL + + + FA G ++ ++ + + G ++ + FV + E A A+ + ++ + + V KK R + A T +Y+ N+ +V R+ F F ++S + +EG+S G+GFV+F+T E A+AA+ ++ KE+ + L + QK + E +++ + + + A Sbjct: 132 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHIS-KKDRQSKFEEMKANFTN--IYIKNIDPEVEDEEFRKLFE-KFGEITSATLSRDSEGKSRGFGFVNFSTHESAQAAVEEMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKA 320
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: PABP_ASPOR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.112e-11 Identity = 45/193 (23.32%), Postives = 92/193 (47.67%), Query Frame = 1 Query: 226 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESNKEEEDVSEDQSA 804 +++ NL + + + FA G ++ ++ + + G ++ + FV + E A A+ + ++ + + V KK R + A T +Y+ N+ V RE F F ++S + EG+S G+GFV+F+T E A+AA+ ++ KE+ + L + QK + E +++ + + + A Sbjct: 139 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHIS-KKDRQSKFEEMKANFTN--VYIKNIDQDVTEEEFRELFE-KFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEKA 327
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: PABP_ASPNC (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pab1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.112e-11 Identity = 44/193 (22.80%), Postives = 93/193 (48.19%), Query Frame = 1 Query: 226 IYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESNKEEEDVSEDQSA 804 +++ NL + + + FA G ++ ++ + + G ++ + FV + E A A+ + ++ + + V KK R + A T +Y+ NL ++ R+ F F ++S + EG+S G+GFV+F+T E A+AA+ ++ KE+ + L + QK + E +++ + + + A Sbjct: 144 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHIS-KKDRQSKFEEMKANFTN--VYIKNLDSEIDDDEFRKMFE-KFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKA 332
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: NUCL_RAT (Nucleolin OS=Rattus norvegicus GN=Ncl PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 1.112e-11 Identity = 47/174 (27.01%), Postives = 93/174 (53.45%), Query Frame = 1 Query: 220 RKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQ 741 + + + NL +S + ++ +F +++ ++ GK++ +AF+ AS E+A+ A+N + E+ GR IR+E + PR +A + +T L+V LS L+E F + V +++V + G S G+GFV F ++E+A+AA +++ E+ G + L + + Sbjct: 489 KTLVLSNLSYSATEETLQEVFEKA---TFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLE----LQGPRGSPNARSQPSKT---LFVKGLSEDTTEETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAK 649 The following BLAST results are available for this feature:
BLAST of DY306149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
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Sequences
The
following sequences are available for this feature:
EST sequence >DY306149 ID=DY306149; Name=DY306149; organism=Citrus sinensis; type=EST; length=1055bpback to top |