DY306149
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: HNRPM_RAT (Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus GN=Hnrnpm PE=1 SV=4) HSP 1 Score: 68.5514 bits (166), Expect = 7.208e-11 Identity = 51/177 (28.81%), Postives = 84/177 (47.46%), Query Frame = 1 Query: 217 RRKIYVFNLPWSFSVAEIKNLFAP-CGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQK 744 R + ++ N+P+ +K+L G V VE++ GK+R A V E + A + +SGR ++V K+ R A A ++V+NL +KV L+E FS V + ++ E +G+S G G V+F EA AIS +G+ L RP+ +K ++ Sbjct: 69 RYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKV---KEDPDGEHARRAMQKAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADIL-EDKDGKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKMDER 241
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: RBM39_PONAB (RNA-binding protein 39 OS=Pongo abelii GN=RBM39 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 9.413e-11 Identity = 62/243 (25.51%), Postives = 107/243 (44.03%), Query Frame = 1 Query: 64 LPHCIKLLHSSNSTPSLIYNFPTRNVCLQVCSTLQDTTVQTKPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGK-NRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRP-------QRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESN 768 LPH IKL + + S P R V + + T + + +T ++ L +++ F+ G V DV +I + + ++ A+V A+ Q V G I V+ A + +K R Q+ ++ P R LYV +L + + LR F S +++ +S GRS GYGF++F+ E A+ A+ L+G EL GRP+++ + D S ++ Sbjct: 114 LPHSIKLSRRRSRSKS-----PFRKDKSPVREPIDNLTPEERDART--------VFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIG-LTGQRVLGVPIIVQ-ASQAEKNRAAAMANNLQKGSAGPMR-----LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSAS 336
BLAST of DY306149 vs. ExPASy Swiss-Prot
Match: RBM39_HUMAN (RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 9.413e-11 Identity = 62/243 (25.51%), Postives = 107/243 (44.03%), Query Frame = 1 Query: 64 LPHCIKLLHSSNSTPSLIYNFPTRNVCLQVCSTLQDTTVQTKPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGK-NRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRP-------QRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESN 768 LPH IKL + + S P R V + + T + + +T ++ L +++ F+ G V DV +I + + ++ A+V A+ Q V G I V+ A + +K R Q+ ++ P R LYV +L + + LR F S +++ +S GRS GYGF++F+ E A+ A+ L+G EL GRP+++ + D S ++ Sbjct: 114 LPHSIKLSRRRSRSKS-----PFRKDKSPVREPIDNLTPEERDART--------VFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIG-LTGQRVLGVPIIVQ-ASQAEKNRAAAMANNLQKGSAGPMR-----LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSAS 336 The following BLAST results are available for this feature:
BLAST of DY306149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY306149 ID=DY306149; Name=DY306149; organism=Citrus sinensis; type=EST; length=1055bpback to top |