EY702762

Overview
NameEY702762
Unique NameEY702762
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length499
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702762 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.018e-22
Identity = 52/116 (44.83%), Postives = 72/116 (62.07%), Query Frame = 2
Query:   26 LEARRFIDVYESGPDM-NPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQLGYWTRMSAMVNWLLTLIDDVYDVYGTLDELELFTDAV 370
            LEAR+FID+YE+  +  N  LLE AK+DYN VQ +H ++L   S+WWK   L   + +ARDR+ E FFW V   FEP   +   + A V  L++LIDD  D Y T++E  +  +AV
Sbjct:  259 LEARKFIDLYEADIECRNETLLEFAKLDYNRVQLLHQQELCQFSKWWKDLNLASDIPYARDRMAEIFFWAVAMYFEPDYAHTRMIIAKVVLLISLIDDTIDAYATMEETHILAEAV 374          
BLAST of EY702762 vs. ExPASy Swiss-Prot
Match: ECS1_ARTAN (Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.415e-20
Identity = 46/120 (38.33%), Postives = 72/120 (60.00%), Query Frame = 2
Query:   14 RMRTLEARRFIDVYESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQLGYWTRMSAMVNWLLTLIDDVYDVYGTLDELELFTDAVE 373
            R+  LEA R+I  Y+     +  LL+LAK+ +N +Q++H ++L  +S+WWK   +   L +AR+R VE +FW +   FEPQ        +    + T +DD YD YGT +ELE FT+A++
Sbjct:  200 RLPRLEALRYIPFYQQQASHSETLLKLAKLGFNQLQSLHKKELSIISKWWKSFDVANNLPYARNRPVECYFWALAVYFEPQYSESRVFLSRFFSIQTFLDDTYDAYGTYEELEQFTEAIQ 319          
BLAST of EY702762 vs. ExPASy Swiss-Prot
Match: TPSD1_ABIGR (Alpha-bisabolene synthase OS=Abies grandis GN=ag1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.429e-19
Identity = 61/166 (36.75%), Postives = 91/166 (54.82%), Query Frame = 2
Query:    2 HASGRMRTLEARRFIDVYESGPDM--------------NPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQLGYWTRMSAMVNWLLTLIDDVYDVYGTLDELELFTDAVE----SHVLDLPNKHAVAYYKTHDCGHQI 445
            HAS  +  +EA+R+  VY   PD               N   LEL K+D+NI+Q+IH E++K V+ W++ +GL     FAR+R +E +F      +EPQ      +   V  L T++DD+YD YGTLDEL+LFT+AV     S   +LP+   + Y   +D  H++
Sbjct:  454 HAS--VPRVEAKRYCQVYR--PDYARIAKCVYKLPYVNNEKFLELGKLDFNIIQSIHQEEMKNVTSWFRDSGL-PLFTFARERPLEFYFLVAAGTYEPQYAKCRFLFTKVACLQTVLDDMYDTYGTLDELKLFTEAVRRWDLSFTENLPDYMKLCYQIYYDIVHEV 614          
BLAST of EY702762 vs. ExPASy Swiss-Prot
Match: TPSD2_PICAB (Isopimaradiene synthase, chloroplastic OS=Picea abies GN=TPS-ISO PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 7.093e-19
Identity = 55/142 (38.73%), Postives = 83/142 (58.45%), Query Frame = 2
Query:   17 MRTLEARRFIDVYESGPD---------MNPIL-----LELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQLGYWTRMSAMVNWLLTLIDDVYDVYGTLDELELFTDAVESHVLDLPNK 400
            M  LEAR +I+ Y  GP+         M P +     LELAK+D+N VQ++H ++L+ + RWWK +GL E L F R+RV E +F     IFEP+      +   ++    ++DD+YD +GTLD LELF++ V+   L L ++
Sbjct:  510 MPRLEARSYIEHY--GPNDVWLGKTMYMMPYISNLKYLELAKLDFNHVQSLHQKELRDLRRWWKSSGLSE-LKFTRERVTEIYFSAASFIFEPEFATCRDVYTKISIFTVILDDLYDAHGTLDNLELFSEGVKRWDLSLVDR 648          
BLAST of EY702762 vs. ExPASy Swiss-Prot
Match: TPSDV_ABIGR (Abietadiene synthase, chloroplastic OS=Abies grandis GN=ag22 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.064e-18
Identity = 54/139 (38.85%), Postives = 79/139 (56.83%), Query Frame = 2
Query:   17 MRTLEARRFIDVYESGPD--------------MNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQLGYWTRMSAMVNWLLTLIDDVYDVYGTLDELELFTDAVESHVLDL 391
            M  LEAR +I+ Y  GPD               N   LELAK+D+N VQ+IH  +L+ + RWWK +G  + LNF R+RV E +F     IFEP+      +    +    ++DD+YD +G+LD+L+LFT++V+   L L
Sbjct:  512 MPRLEARSYIENY--GPDDVWLGKTVYMMPYISNEKYLELAKLDFNKVQSIHQTELQDLRRWWKSSGFTD-LNFTRERVTEIYFSPASFIFEPEFSKCREVYTKTSNFTVILDDLYDAHGSLDDLKLFTESVKRWDLSL 647          
BLAST of EY702762 vs. ExPASy Swiss-Prot
Match: TPSD4_ABIGR (Delta-selinene synthase OS=Abies grandis GN=ag4 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.520e-18
Identity = 49/138 (35.51%), Postives = 83/138 (60.14%), Query Frame = 2
Query:   29 EARRFIDVYESG-----PDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQLGYWTRMSAMVNWLLTLIDDVYDVYGTLDELELFTDAVESHVL----DLPNKHAVAY 415
            EAR F+++Y         ++N  +L+LAK+D+NI+Q  H +++++++RWW+ +G+ + LNF R R VE + W V  IFEP+        A    L T++DD+YD + TL E+++ T+ V    L    DLP+   +A+
Sbjct:  233 EARSFLEIYGHNHSWLKSNINQKMLKLAKLDFNILQCKHHKEIQFITRWWRDSGISQ-LNFYRKRHVEYYSWVVMCIFEPEFSESRIAFAKTAILCTVLDDLYDTHATLHEIKIMTEGVRRWDLSLTDDLPDYIKIAF 369          
BLAST of EY702762 vs. ExPASy Swiss-Prot
Match: TASY_TAXBR (Taxadiene synthase OS=Taxus brevifolia GN=TDC1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.024e-17
Identity = 51/128 (39.84%), Postives = 76/128 (59.38%), Query Frame = 2
Query:   26 LEARRFIDVYESG-----------PDM-NPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQLGYWTRMSAMVNWLLTLIDDVYDVYGTLDELELFTDAVE 373
            LEAR +ID Y+             P + N   LELAK+D+NIVQ++H E+LK ++RWWK++G+ + +NF R RV E +F +    FEP+          +  L  L DD+ D++ TLDEL+ FT+ V+
Sbjct:  509 LEARSYIDSYDDNYVWQRKTLYRMPSLSNSKCLELAKLDFNIVQSLHQEELKLLTRWWKESGMAD-INFTRHRVAEVYFSSA--TFEPEYSATRIAFTKIGCLQVLFDDMADIFATLDELKSFTEGVK 633          
BLAST of EY702762 vs. ExPASy Swiss-Prot
Match: TASY_TAXBA (Taxadiene synthase OS=Taxus baccata GN=TDC1 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.338e-17
Identity = 51/128 (39.84%), Postives = 76/128 (59.38%), Query Frame = 2
Query:   26 LEARRFIDVYESG-----------PDM-NPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQLGYWTRMSAMVNWLLTLIDDVYDVYGTLDELELFTDAVE 373
            LEAR +ID Y+             P + N   LELAK+D+NIVQ++H E+LK ++RWWK++G+ + +NF R RV E +F +    FEP+          +  L  L DD+ D++ TLDEL+ FT+ V+
Sbjct:  509 LEARSYIDSYDDDYVWQRKTLYRMPSLSNSKCLELAKLDFNIVQSLHQEELKLLTRWWKESGMAD-INFTRHRVAEVYFSSA--TFEPEYSATRIAFTKIGCLQVLFDDMADIFATLDELKSFTEGVK 633          
BLAST of EY702762 vs. ExPASy Swiss-Prot
Match: TPSD6_ABIGR (Camphene synthase, chloroplastic OS=Abies grandis GN=ag6 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.282e-17
Identity = 49/119 (41.18%), Postives = 74/119 (62.18%), Query Frame = 2
Query:   26 LEARRFIDVY---ESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQLGYWTRMSAMVNWLLTLIDDVYDVYGTLDELELFTDAVE 373
            LEAR ++DV+       +    LLELAK+++NI  ++   +LK+VSRWWK +G  E + F R R VE +       FEPQ   +      ++ L+T++DD+YDV+GT+DELELFT  ++
Sbjct:  272 LEARNYMDVFGQHTKNKNAAEKLLELAKLEFNIFHSLQERELKHVSRWWKDSGSPE-MTFCRHRHVEYYALASCIAFEPQHSGFRLGFTKMSHLITVLDDMYDVFGTVDELELFTATIK 389          
BLAST of EY702762 vs. ExPASy Swiss-Prot
Match: TPSD5_ABIGR (Gamma-humulene synthase OS=Abies grandis GN=ag5 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.282e-17
Identity = 50/138 (36.23%), Postives = 82/138 (59.42%), Query Frame = 2
Query:   29 EARRFIDVY-----ESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQLGYWTRMSAMVNWLLTLIDDVYDVYGTLDELELFTDAVE----SHVLDLPNKHAVAY 415
            EAR FI+++     E   +++  +LELAK+D+NI+Q  H ++L+ +SRW+  + +   LNF R   VE +FW    I EP+          +  L+T++DD+YD +GTLD+L++FT+ V     S V  LP+   +A+
Sbjct:  245 EARSFIEIFGQIDSELKSNLSKKMLELAKLDFNILQCTHQKELQIISRWFADSSIAS-LNFYRKCYVEFYFWMAAAISEPEFSGSRVAFTKIAILMTMLDDLYDTHGTLDQLKIFTEGVRRWDVSLVEGLPDFMKIAF 381          
The following BLAST results are available for this feature:
BLAST of EY702762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
CASS_RICCO4.018e-2244.83Casbene synthase, chloroplastic OS=Ricinus communi... [more]
ECS1_ARTAN6.415e-2038.33Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=... [more]
TPSD1_ABIGR1.429e-1936.75Alpha-bisabolene synthase OS=Abies grandis GN=ag1 ... [more]
TPSD2_PICAB7.093e-1938.73Isopimaradiene synthase, chloroplastic OS=Picea ab... [more]
TPSDV_ABIGR2.064e-1838.85Abietadiene synthase, chloroplastic OS=Abies grand... [more]
TPSD4_ABIGR3.520e-1835.51Delta-selinene synthase OS=Abies grandis GN=ag4 PE... [more]
TASY_TAXBR1.024e-1739.84Taxadiene synthase OS=Taxus brevifolia GN=TDC1 PE=... [more]
TASY_TAXBA1.338e-1739.84Taxadiene synthase OS=Taxus baccata GN=TDC1 PE=3 S... [more]
TPSD6_ABIGR2.282e-1741.18Camphene synthase, chloroplastic OS=Abies grandis ... [more]
TPSD5_ABIGR2.282e-1736.23Gamma-humulene synthase OS=Abies grandis GN=ag5 PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-H11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702762 ID=EY702762; Name=EY702762; organism=Citrus sinensis; type=EST; length=499bp
CCACGCGTCCGGGAGGATGCGAACATTGGAGGCAAGGCGGTTCATCGATG
TATACGAAAGTGGACCAGACATGAACCCTATCTTGCTCGAGCTTGCTAAA
GTTGACTATAATATTGTGCAAGCAATACACTAAGAGGATCTCAAATATGT
GTCAAGGTGGTGGAAGAAAACAGGACTTGGGGAGAAGTTGAATTTTGCAA
GAGACAGAGTAGTGGAGAATTTCTTCTGGACCGTGGGGGATATATTCGAA
CCTCAGCTTGGATATTGGACAAGGATGTCTGCAATGGTTAATTGGCTTTT
AACATTAATCGATGATGTTTATGATGTCTATGGGACCTTGGACGAGCTTG
AGCTATTCACTGATGCAGTTGAGAGTCATGTACTAGATCTCCCAAATAAA
CATGCAGTTGCGTACTATAAGACTCATGACTGTGGACACCAAATCGTTCC
TCCTCATAATAAATAAATATTATTTAAGTGTCTTAAAAAAAAAAAAAAA
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