DY306122
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306122 vs. ExPASy Swiss-Prot
Match: ISPH_PROM3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9303) GN=ispH PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.452e-14 Identity = 37/74 (50.00%), Postives = 53/74 (71.62%), Query Frame = 2 Query: 2 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEI 223 HLQEIA RGI S+ ID+ +RIG N I +K + +L + N+LP G + +GITSGASTPD+ VE V++K+ ++ Sbjct: 322 HLQEIAISRGIRSFHIDTPERIGDNNSIQHKPLGEDLFIESNFLPAGSVNVGITSGASTPDRVVEHVIQKLIDL 395
BLAST of DY306122 vs. ExPASy Swiss-Prot
Match: ISPH_SYNSC (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9605) GN=ispH PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.207e-14 Identity = 38/75 (50.67%), Postives = 55/75 (73.33%), Query Frame = 2 Query: 2 HLQEIAEDRGIPSYWIDSEKRIGPG-NKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEI 223 HLQEIA RGI S+ ID+ +RI G N I +K + +L + ++LP G + +GITSGASTPD+AVEEV++K+ ++ Sbjct: 322 HLQEIAVSRGIRSFHIDTPERIDVGSNSIEHKPLAADLCREGDFLPEGPVRVGITSGASTPDRAVEEVIEKLMQL 396
BLAST of DY306122 vs. ExPASy Swiss-Prot
Match: ISPH_SYNS3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9311) GN=ispH PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.207e-14 Identity = 37/74 (50.00%), Postives = 53/74 (71.62%), Query Frame = 2 Query: 2 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEI 223 HLQEIA RGI S+ ID+ +RI N I +K + EL +E +LP+G +T+GITSGASTPD+ VE V++++ + Sbjct: 322 HLQEIAVSRGIRSFHIDTPERIHTDNSIEHKPLGEELTVEELFLPSGPVTVGITSGASTPDRVVEHVIQRLIAL 395
BLAST of DY306122 vs. ExPASy Swiss-Prot
Match: ISPH_PROMT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain NATL2A) GN=ispH PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.207e-14 Identity = 42/76 (55.26%), Postives = 56/76 (73.68%), Query Frame = 2 Query: 2 HLQEIAEDRGIPSYWIDSEKRIGPG-NKIAYK-LMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEI 223 HLQEIA RGI S+ ID+ +RIG N I + L GEL+ +EN+L NG I++GITSGASTPD+ VE+V+ K+ +I Sbjct: 322 HLQEIAISRGIRSFHIDTPERIGEETNTITHMPLEGGELLTEENFLQNGNISVGITSGASTPDRVVEDVIHKLMKI 397
BLAST of DY306122 vs. ExPASy Swiss-Prot
Match: ISPH_PROM1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain NATL1A) GN=ispH PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.207e-14 Identity = 42/76 (55.26%), Postives = 56/76 (73.68%), Query Frame = 2 Query: 2 HLQEIAEDRGIPSYWIDSEKRIGPG-NKIAYK-LMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEI 223 HLQEIA RGI S+ ID+ +RIG N I + L GEL+ +EN+L NG I++GITSGASTPD+ VE+V+ K+ +I Sbjct: 322 HLQEIAISRGIRSFHIDTPERIGEETNTITHMPLEGGELLTEENFLQNGNISVGITSGASTPDRVVEDVIHKLMKI 397
BLAST of DY306122 vs. ExPASy Swiss-Prot
Match: ISPH_PROMP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ispH PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.577e-13 Identity = 37/77 (48.05%), Postives = 56/77 (72.73%), Query Frame = 2 Query: 2 HLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKR 229 HLQEIA ++ I S+ ID+ +RI N I +K + E+V K+N++P+G+I +GITSGASTPDK V +V++K+ I + Sbjct: 322 HLQEIAINKNISSFHIDTPERISVKENSILHKPLKSEMVLKKNFIPDGEIKVGITSGASTPDKIVADVIEKLIAITK 398
BLAST of DY306122 vs. ExPASy Swiss-Prot
Match: ISPH_SYNPX (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain WH8102) GN=ispH PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.969e-13 Identity = 38/72 (52.78%), Postives = 52/72 (72.22%), Query Frame = 2 Query: 2 HLQEIAEDRGIPSYWIDSEKRI-GPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKV 214 HLQEIA RGI S+ ID+ R+ N I +K ++ L + N+LP G +T+GITSGASTPD+AVEEV++K+ Sbjct: 322 HLQEIALSRGIRSFHIDTPDRLDAQANAIEHKPLNENLRLESNFLPAGPVTVGITSGASTPDRAVEEVIEKL 393
BLAST of DY306122 vs. ExPASy Swiss-Prot
Match: ISPH_PROMS (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain AS9601) GN=ispH PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.969e-13 Identity = 38/75 (50.67%), Postives = 54/75 (72.00%), Query Frame = 2 Query: 2 HLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEI 223 HLQEIA + I S+ ID+ +RI N I +K + EL K+N+LP+G+I +GITSGASTPDK V +V++K+ +I Sbjct: 322 HLQEIAITKNISSFHIDTPERISVKENSIFHKPLGSELELKKNFLPSGKINVGITSGASTPDKVVADVIEKLIDI 396
BLAST of DY306122 vs. ExPASy Swiss-Prot
Match: ISPH_PROMA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus GN=ispH PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.041e-12 Identity = 37/81 (45.68%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 2 HLQEIAEDRGIPSYWIDSEKRIGP-GNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEAL 241 HLQEIA +GI S+ ID+ +RIG N I +K + +L + N+LP G+I +GITSGASTPD+ VE V++K+ + + + Sbjct: 322 HLQEIALAKGIRSFHIDTPERIGEIENTITHKPLGDDLRVESNFLPEGKINVGITSGASTPDRIVEHVIQKLINLSERKLM 402
BLAST of DY306122 vs. ExPASy Swiss-Prot
Match: ISPH_PROM5 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9515) GN=ispH PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.041e-12 Identity = 37/75 (49.33%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 2 HLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEI 223 HLQEIA I S+ ID RI N I +K + EL+ K+N++P+G+I +GITSGASTPDK V +V++K+ I Sbjct: 322 HLQEIAISNNIESFHIDISDRISVENNSICHKPLESELILKKNFIPDGKIKVGITSGASTPDKIVADVIEKLIAI 396 The following BLAST results are available for this feature:
BLAST of DY306122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >DY306122 ID=DY306122; Name=DY306122; organism=Citrus sinensis; type=EST; length=393bpback to top |