DY306097

Overview
NameDY306097
Unique NameDY306097
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1209
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306097 vs. ExPASy Swiss-Prot
Match: SYT_BACTN (Threonyl-tRNA synthetase OS=Bacteroides thetaiotaomicron GN=thrS PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 8.395e-40
Identity = 79/211 (37.44%), Postives = 120/211 (56.87%), Query Frame = 2
Query:  197 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKGSSAYWRGN 820
            IKIT PDGSV+E      + + IA+ IS  LA + L   VNG  +D+ RP+  D D  L+ +D +EG+  FWH+SAH+L +A+++ Y G +  IGP      GFYYD   G+  +      +I+++  + + +K    R  +++  AL+MF D    +K E+I++L  D  IT Y  G   DLCRGPH+  T+ +K       + AYWRG+
Sbjct:    2 IKITFPDGSVREYNEG-VNGLQIAESISSRLAQDVLACGVNGETYDLGRPINEDADFVLYKWDDEEGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIE--NGFYYDVDPGEAVIKESDLPAIEAKMLELSAKKDAVVRESISKTDALKMFGDRGETYKCELISEL-EDGHITTYTQGAFTDLCRGPHLMTTAPIKAIKLTTVAGAYWRGH 208          

HSP 2 Score: 44.2838 bits (103), Expect = 8.395e-40
Identity = 29/94 (30.85%), Postives = 47/94 (50.00%), Query Frame = 1
Query:  814 GKQDR*NLTKFYGISYPDXXXXXXXXXXXXEAKKNDPQKNGKKTKTFLLSPPLPQKAGFFPLPGDPKIKKKLEGILNKRQIWEKKSYQRRV*PP 1095
            G +DR  LT+ YGI++P             EAKK D +K GK+ + F+ S  + +    + LP    ++ +L+  L  R+I  +  YQ  + PP
Sbjct:  207 GHEDRKMLTRIYGITFPKKKMLDEYLVLLEEAKKRDHRKIGKEMQLFMFSETVGKGLPMW-LPKGTALRLRLQEFL--RRIQTRYDYQEVITPP 297          
BLAST of DY306097 vs. ExPASy Swiss-Prot
Match: SYT_CLOTH (Threonyl-tRNA synthetase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=thrS PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.857e-39
Identity = 92/211 (43.60%), Postives = 126/211 (59.72%), Query Frame = 2
Query:  197 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKGSSAYWRGN 820
            IKITL DGSV+E     T   ++A+ IS  LA  AL   VNG + D++ PLE DC L L TFD + GRD + H+++HIL QA+++ Y   KL IGP      GFYYD F  +   + +  + I+ E  K  KE    ER  + R++A++   + N  +KVE+I DLP  +TI+ Y+ G  VDLC GPHI +T  VK F  +  + AYWRGN
Sbjct:    2 IKITLKDGSVREYNEGITIK-EVAESISAGLARVALAGEVNGEVKDLSYPLENDCTLNLLTFDDEGGRDAYRHTTSHILAQAVKRLYPDAKLAIGPAIE--NGFYYD-FDVEKPFSVEDLEKIEEEMKKIIKEDYKLERFTLPREEAIKFMEERNEPYKVELIRDLPEGETISFYKQGDFVDLCAGPHIESTGKVKAFKLMSVAGAYWRGN 208          

HSP 2 Score: 23.8682 bits (50), Expect = 1.857e-39
Identity = 16/61 (26.23%), Postives = 23/61 (37.70%), Query Frame = 1
Query:  814 GKQDR*NLTKFYGISYPDXXXXXXXXXXXXEAKKNDPQKNGKKTKTFLLSPPLPQKAGFFP 996
            G +    L + YG S+              EAKK D +K G++   F +    P    F P
Sbjct:  207 GNEKNKMLQRIYGTSFTKKSDLDAYITRIEEAKKRDHRKLGRELDLFDIYEEGPGFPFFMP 267          
BLAST of DY306097 vs. ExPASy Swiss-Prot
Match: SYT_STAS1 (Threonyl-tRNA synthetase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=thrS PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 3.151e-39
Identity = 87/211 (41.23%), Postives = 128/211 (60.66%), Query Frame = 2
Query:  191 DPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYG-CKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKGSSAYWRGN 820
            D IKI  PDG+ KE  +  T+  DIAQ IS  L   A+   +NG L D+TRP+E+D D+++ T  SDE  +   HS+AH++ QA+++ YG     +GP    G  FYYD F  +  ++ D F+ I+    + A E  P ER  V+R++A   FSD+ +K E+I+ +P D+ +T+Y  G   DLCRG H+P+TS +K F  L  + AYWRG+
Sbjct:    2 DQIKIKFPDGNTKEFDKGTTTE-DIAQSISPGLRKKAVAGKLNGQLIDLTRPIESDGDIEIVTPGSDEALEVLRHSTAHLMAQALKRLYGEVHFGVGPVIEGG--FYYD-FDMEESISSDDFEKIEKTMKQIANENYPIERKVVSRNEAKAFFSDDPYKQELIDAIPEDENVTLYTQGEFTDLCRGVHVPSTSKIKEFKLLSTAGAYWRGD 208          

HSP 2 Score: 25.0238 bits (53), Expect = 3.151e-39
Identity = 16/74 (21.62%), Postives = 34/74 (45.95%), Query Frame = 1
Query:  835 LTKFYGISYPDXXXXXXXXXXXXEAKKNDPQKNGKKTKTFLLSPPLPQKAGFFPLPGDPKIKKKLEGILNKRQI 1056
            L + YG ++ D            E K+ D +K GK+ + F  +P +      + LP    I++++E  +  +++
Sbjct:  214 LQRIYGTAFFDKKDLKAHLQMLEERKERDHRKIGKELELFSNNPLVGAGLPLW-LPNGATIRREIERYIVDKEV 286          
BLAST of DY306097 vs. ExPASy Swiss-Prot
Match: SYT_BACFR (Threonyl-tRNA synthetase OS=Bacteroides fragilis GN=thrS PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 3.151e-39
Identity = 76/211 (36.02%), Postives = 121/211 (57.35%), Query Frame = 2
Query:  197 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKGSSAYWRGN 820
            IKIT PDGSV+E      + + IA+ IS  LA + L   VNG ++D+ RP+  D  + L+ ++ ++G+  FWH+SAH+L +A+++ Y G +  IGP      GFYYD   G+  +      +I+++  +   +K+   R ++ +  AL+MF D    +K E+I++L  D  IT Y  G   DLCRGPH+  T+ +K       + AYWRG+
Sbjct:    2 IKITFPDGSVREYNEG-VNGLQIAESISSRLAQDVLACGVNGEIYDLGRPINEDASVVLYKWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIE--NGFYYDVDPGEAVIKEADLPAIEAKMAELVAKKEAVVRRDIAKGDALKMFGDRGETYKCELISEL-EDGHITTYTQGDFTDLCRGPHLMTTAPIKAIKLTSVAGAYWRGH 208          

HSP 2 Score: 44.669 bits (104), Expect = 3.151e-39
Identity = 29/94 (30.85%), Postives = 47/94 (50.00%), Query Frame = 1
Query:  814 GKQDR*NLTKFYGISYPDXXXXXXXXXXXXEAKKNDPQKNGKKTKTFLLSPPLPQKAGFFPLPGDPKIKKKLEGILNKRQIWEKKSYQRRV*PP 1095
            G +DR  LT+ YGI++P             EAKK D +K GK+ + F+ S  + +    + LP    ++ +L+  L  R+I  +  YQ  + PP
Sbjct:  207 GHEDRKMLTRIYGITFPKKKMLDEYLALMEEAKKRDHRKIGKEMQLFMFSDTVGKGLPMW-LPKGTALRLRLQDFL--RRIQTRYDYQEVITPP 297          
BLAST of DY306097 vs. ExPASy Swiss-Prot
Match: SYT_BACFN (Threonyl-tRNA synthetase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=thrS PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 3.151e-39
Identity = 76/211 (36.02%), Postives = 121/211 (57.35%), Query Frame = 2
Query:  197 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKGSSAYWRGN 820
            IKIT PDGSV+E      + + IA+ IS  LA + L   VNG ++D+ RP+  D  + L+ ++ ++G+  FWH+SAH+L +A+++ Y G +  IGP      GFYYD   G+  +      +I+++  +   +K+   R ++ +  AL+MF D    +K E+I++L  D  IT Y  G   DLCRGPH+  T+ +K       + AYWRG+
Sbjct:    2 IKITFPDGSVREYNEG-VNGLQIAESISSRLAQDVLACGVNGEIYDLGRPINEDASVVLYKWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIE--NGFYYDVDPGEAVIKEADLPAIEAKMAELVAKKEAVVRRDIAKGDALKMFGDRGETYKCELISEL-EDGHITTYTQGDFTDLCRGPHLMTTAPIKAIKLTSVAGAYWRGH 208          

HSP 2 Score: 44.669 bits (104), Expect = 3.151e-39
Identity = 29/94 (30.85%), Postives = 47/94 (50.00%), Query Frame = 1
Query:  814 GKQDR*NLTKFYGISYPDXXXXXXXXXXXXEAKKNDPQKNGKKTKTFLLSPPLPQKAGFFPLPGDPKIKKKLEGILNKRQIWEKKSYQRRV*PP 1095
            G +DR  LT+ YGI++P             EAKK D +K GK+ + F+ S  + +    + LP    ++ +L+  L  R+I  +  YQ  + PP
Sbjct:  207 GHEDRKMLTRIYGITFPKKKMLDEYLALMEEAKKRDHRKIGKEMQLFMFSDTVGKGLPMW-LPKGTALRLRLQDFL--RRIQTRYDYQEVITPP 297          
BLAST of DY306097 vs. ExPASy Swiss-Prot
Match: SYT_FINM2 (Threonyl-tRNA synthetase OS=Finegoldia magna (strain ATCC 29328) GN=thrS PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.080e-39
Identity = 79/210 (37.62%), Postives = 126/210 (60.00%), Query Frame = 2
Query:  200 KITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKGSSAYWRGN 820
            ++ L DGS KE    E S +D+ + IS+ LA + + ++V+G +  +   +++DC+++   FD DEG+  FWH+S+H++  AI++ Y G K  IGP  +   GFYYD    D    P+  + I++E  K  KE     R+E++R +ALE F +   ++KV++I +   D TIT+Y  G  VDLCRGPH+ +   +K F  L  + AYWRG+
Sbjct:    3 EVKLKDGSAKEFDG-EISLLDVCKSISEGLARDCVGAVVDGKIMGLMETIDSDCEVQFVKFDDDEGKQVFWHTSSHLMAYAIQRLYPGTKFAIGP--SIDSGFYYD-LDTDHKFVPEDLEKIEAEMKKIVKENPKLVRVEISRKEALERFKNEGQDYKVDLIENFDEDATITLYEMGDFVDLCRGPHLLDVKNIKAFKLLSIAGAYWRGD 208          

HSP 2 Score: 31.9574 bits (71), Expect = 9.080e-39
Identity = 27/85 (31.76%), Postives = 38/85 (44.71%), Query Frame = 1
Query:  814 GKQDR*NLTKFYGISYPDXXXXXXXXXXXXEAKKNDPQKNGKKTKTFLLSPPLPQKAGF-FPLPGDPKIKKKLEGILNKRQIWEK 1065
            G ++   L + YGIS+P             EAKK D +K GK+   F +    P   GF F  P    +  +LE  L K Q+ E+
Sbjct:  207 GDENNKMLQRIYGISFPKKKLLDEYLDRMEEAKKRDHRKIGKEMGLFSIQEEGP---GFPFFHPNGMVVLNELEKFL-KEQLLER 287          
BLAST of DY306097 vs. ExPASy Swiss-Prot
Match: SYT_STRSY (Threonyl-tRNA synthetase OS=Streptococcus suis (strain 05ZYH33) GN=thrS PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.183e-38
Identity = 85/209 (40.67%), Postives = 124/209 (59.33%), Query Frame = 2
Query:  197 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADK-TITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKGSSAYWRG 817
            IKIT PDG+V+E +   T+  +IA+ ISKSLA  AL    NG L D TR ++ D  L++   D D+  D   HS+AH+  QA  + +   KL +GP     +GFYYD       ++ +    I  E  K  KE  P ER EVT+++ALE+F ++ +K+E+I++   D+  +T+Y  G  VDLCRGPH+P+T  ++ F  L  + AYWRG
Sbjct:    2 IKITFPDGAVREYQAGVTT-FEIAESISKSLAKKALAGKFNGKLIDTTRAIDEDGTLEIVMPDHDDALDILRHSAAHLFAQAARRLFPDIKLGVGPAIQ--DGFYYDTDNAAGQISNEDLPRIQEEMMKIVKENFPSERREVTKEEALEIFKNDPYKLELIHEHSDDEGGLTIYTQGEYVDLCRGPHVPSTGRIQIFELLNVAGAYWRG 207          

HSP 2 Score: 36.5798 bits (83), Expect = 1.183e-38
Identity = 25/94 (26.60%), Postives = 43/94 (45.74%), Query Frame = 1
Query:  814 GKQDR*NLTKFYGISYPDXXXXXXXXXXXXEAKKNDPQKNGKKTKTFLLSPPLPQKAGFFPLPGDPKIKKKLEGILNKRQIWEKKSYQRRV*PP 1095
            GK +   + + YG ++ D            EAK+ D +K GK+   F++S  + Q   F+ LP    I++ LE  +  +++     YQ    PP
Sbjct:  207 GKSENPMMQRVYGTAWFDKKDLKAYLQMREEAKERDHRKLGKELDLFMISQEVGQGLPFW-LPNGATIRRTLERYITDKEL--ASGYQHVYTPP 297          
BLAST of DY306097 vs. ExPASy Swiss-Prot
Match: SYT_STRS2 (Threonyl-tRNA synthetase OS=Streptococcus suis (strain 98HAH33) GN=thrS PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.183e-38
Identity = 85/209 (40.67%), Postives = 124/209 (59.33%), Query Frame = 2
Query:  197 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADK-TITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKGSSAYWRG 817
            IKIT PDG+V+E +   T+  +IA+ ISKSLA  AL    NG L D TR ++ D  L++   D D+  D   HS+AH+  QA  + +   KL +GP     +GFYYD       ++ +    I  E  K  KE  P ER EVT+++ALE+F ++ +K+E+I++   D+  +T+Y  G  VDLCRGPH+P+T  ++ F  L  + AYWRG
Sbjct:    2 IKITFPDGAVREYQAGVTT-FEIAESISKSLAKKALAGKFNGKLIDTTRAIDEDGTLEIVMPDHDDALDILRHSAAHLFAQAARRLFPDIKLGVGPAIQ--DGFYYDTDNAAGQISNEDLPRIQEEMMKIVKENFPSERREVTKEEALEIFKNDPYKLELIHEHSDDEGGLTIYTQGEYVDLCRGPHVPSTGRIQIFELLNVAGAYWRG 207          

HSP 2 Score: 36.5798 bits (83), Expect = 1.183e-38
Identity = 25/94 (26.60%), Postives = 43/94 (45.74%), Query Frame = 1
Query:  814 GKQDR*NLTKFYGISYPDXXXXXXXXXXXXEAKKNDPQKNGKKTKTFLLSPPLPQKAGFFPLPGDPKIKKKLEGILNKRQIWEKKSYQRRV*PP 1095
            GK +   + + YG ++ D            EAK+ D +K GK+   F++S  + Q   F+ LP    I++ LE  +  +++     YQ    PP
Sbjct:  207 GKSENPMMQRVYGTAWFDKKDLKAYLQMREEAKERDHRKLGKELDLFMISQEVGQGLPFW-LPNGATIRRTLERYITDKEL--ASGYQHVYTPP 297          
BLAST of DY306097 vs. ExPASy Swiss-Prot
Match: SYT_BACHD (Threonyl-tRNA synthetase OS=Bacillus halodurans GN=thrS PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 3.407e-38
Identity = 87/215 (40.47%), Postives = 126/215 (58.60%), Query Frame = 2
Query:  191 DPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY---GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKGSSAYWRGN 820
            D I IT PDG+VKE  +  T+  +IA  IS  L   AL  M++G L D+  P+E D  + + T +SDE  +   HS+AH++ QA+++ +     KL +GP    G  FYYD    D  L P+    I+ E  K   E  P ER+ V+R++AL  + +  + +K+E+INDLP D+TIT+Y  G   DLCRG H+P+T  +K F  L  + AYWRG+
Sbjct:    3 DMINITFPDGAVKEFPKGTTTA-EIAGSISPGLKKKALAGMLDGTLLDLNTPIEQDGTITIVTPESDEALEVLRHSTAHVMAQALKRLFKDRNVKLGVGPVIEGG--FYYDVDM-DESLTPEDLPKIEKEMKKIIGENLPIERVVVSREEALARYEEVGDPYKIELINDLPEDETITIYEQGEFFDLCRGVHVPSTGKLKEFKLLNLAGAYWRGD 213          

HSP 2 Score: 26.5646 bits (57), Expect = 3.407e-38
Identity = 22/81 (27.16%), Postives = 36/81 (44.44%), Query Frame = 1
Query:  835 LTKFYGISYPDXXXXXXXXXXXXEAKKNDPQKNGKKTKTFLLSPPLPQKAGFFPLPGDPKIKKKLEGILNKRQIWEKKSYQ 1077
            L + YG ++              EAK+ D +K GK+   F LS  + Q    + LP    I++ +E  +  ++  EK  YQ
Sbjct:  219 LQRIYGTAFFKKADLDEHLRLLEEAKERDHRKLGKELGIFALSQKVGQGLPLW-LPKGATIRRIIERYIVDKE--EKLGYQ 296          
BLAST of DY306097 vs. ExPASy Swiss-Prot
Match: SYT_BACV8 (Threonyl-tRNA synthetase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=thrS PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.438e-38
Identity = 77/210 (36.67%), Postives = 121/210 (57.62%), Query Frame = 2
Query:  197 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKGSSAYWRG 817
            IKIT PDGSV+E     T  + IA+ IS  LA + L   VNG   D++RP+  D +  L+ ++ ++G+  FWH+SAH+L +A+++ Y G +  IGP      GFYYD   G+  +      +I+++  + A +K+   R  + ++ AL+ F +    +K E+I++L  D  IT Y  G   DLCRGPH+ +T+ +K    L  + AYWRG
Sbjct:    2 IKITFPDGSVREYNEGVTG-LQIAESISSRLAQDVLACGVNGETIDLSRPINEDANFVLYKWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIE--NGFYYDVDPGEAIIKEADLPAIEAKMAELAAKKEILVRQSIAKEDALKKFGERGETYKCELISEL-EDGHITTYTQGAFTDLCRGPHLTSTAPIKAIKLLTVAGAYWRG 207          

HSP 2 Score: 41.9726 bits (97), Expect = 4.438e-38
Identity = 27/94 (28.72%), Postives = 47/94 (50.00%), Query Frame = 1
Query:  814 GKQDR*NLTKFYGISYPDXXXXXXXXXXXXEAKKNDPQKNGKKTKTFLLSPPLPQKAGFFPLPGDPKIKKKLEGILNKRQIWEKKSYQRRV*PP 1095
            G++DR  +T+ YGI++P             EAKK D +K GK+   F+ +  + +    + LP    ++ +L+  L  R+I  +  YQ  + PP
Sbjct:  207 GQEDRKQMTRIYGITFPKKKMLDEYLVMLEEAKKRDHRKIGKEMDLFMFTDMVGKGLPMW-LPKGTALRIRLQDFL--RRIQARYDYQEVMCPP 297          
The following BLAST results are available for this feature:
BLAST of DY306097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SYT_BACTN8.395e-4037.44Threonyl-tRNA synthetase OS=Bacteroides thetaiotao... [more]
SYT_CLOTH1.857e-3943.60Threonyl-tRNA synthetase OS=Clostridium thermocell... [more]
SYT_STAS13.151e-3941.23Threonyl-tRNA synthetase OS=Staphylococcus saproph... [more]
SYT_BACFR3.151e-3936.02Threonyl-tRNA synthetase OS=Bacteroides fragilis G... [more]
SYT_BACFN3.151e-3936.02Threonyl-tRNA synthetase OS=Bacteroides fragilis (... [more]
SYT_FINM29.080e-3937.62Threonyl-tRNA synthetase OS=Finegoldia magna (stra... [more]
SYT_STRSY1.183e-3840.67Threonyl-tRNA synthetase OS=Streptococcus suis (st... [more]
SYT_STRS21.183e-3840.67Threonyl-tRNA synthetase OS=Streptococcus suis (st... [more]
SYT_BACHD3.407e-3840.47Threonyl-tRNA synthetase OS=Bacillus halodurans GN... [more]
SYT_BACV84.438e-3836.67Threonyl-tRNA synthetase OS=Bacteroides vulgatus (... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAM3CC05RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306097 ID=DY306097; Name=DY306097; organism=Citrus sinensis; type=EST; length=1209bp
GTCCTCTCAACTCTTTCGCTGTCAAAACACTAAACCCTCCTCCGCCACCA
ATCTCCGCCGCATCTGCGCGATGCCGTCTCCAAATCAAGTCAAAGACGAA
GAGTATCTCAACAAAGTCATTCCCAAACGTATCAGTCTCTTCCAGTCTCT
TCAGTCCGAACAACAAGCCCGCCTCCAGTCTCTCCCCCATGATCCCATCA
AGATTACTCTGCCCGATGGGTCTGTGAAAGAAGGCAAGAGATGGGAGACT
TCGCCCATGGATATTGCTCAGGGAATTTCGAAGAGTTTGGCGGCCAATGC
TTTGATTTCCATGGTGAATGGTGTTTTGTGGGACATGACTAGGCCCTTAG
AGGCCGATTGTGACCTCAAGTTATTCACTTTTGATTCTGACGAAGGCCGT
GATACTTTCTGGCACTCTAGTGCCCACATTCTAGGACAGGCAATTGAGCA
GCAGTATGGTTGTAAGTTGTGTATTGGGCCATGCACAACAAGAGGAGAGG
GTTTCTATTATGATGCATTTTATGGGGACTTGGGCTTGAATCCAGATCAC
TTCAAGTCAATTGATTCAGAAGCAGATAAAGCTGCCAAGGAAAAGCAGCC
TTTTGAGCGCATTGAAGTTACAAGAGATCAGGCTCTTGAGATGTTTTCCG
ACAACAATTTTAAGGTTGAAATAATCAATGATCTGCCTGCTGACAAAACT
ATCACAGTGTACAGATGTGGTCCCTTGGTTGATTTGTGTCGTGGACCTCA
TATACCAAATACATCATTTGTGAAAGGATTTGGGTGTTTGAAAGGTTCAT
CGGCTTATTGGAGGGGAAACAGGATCGTTGAAATTTAACGAAATTTTATG
GAATATCATACCCTGATAAAAAACGGTTGAAGAAAATATTGAAATGCTTA
AGGGAGGCAAAAAAAAATGACCCACAAAAAAATGGGAAAAAAACAAAAAC
TTTTCTTTTATCCCCCCCTTTACCCCAGAAAGCCGGGTTCTTTCCTCTCC
CTGGGGACCCCAAAATTAAAAAAAAATTGGAGGGAATTTTAAATAAACGA
CAAATTTGGGAAAAGAAAAGTTATCAAAGAAGGGTTTAACCCCCCCAAAA
AAGTTATTAAAATAAAAAATCCTCGGGGAAAAAAACTTGGGGCCCCGGGC
GCCGAAAAAATCATAAGAGGAAGAAAAAAAGTTGTTTTTTATTTTTTTAT
TGTATAATT
back to top