EY702741

Overview
NameEY702741
Unique NameEY702741
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702741 vs. ExPASy Swiss-Prot
Match: STIP1_RAT (Stress-induced-phosphoprotein 1 OS=Rattus norvegicus GN=Stip1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.910e-12
Identity = 39/117 (33.33%), Postives = 66/117 (56.41%), Query Frame = 3
Query:   39 KCQGNMVMQSQQYSDAIELYSFAIALCGHNAVYYSNRAAAYTQIHQYAEAVRDCLKSIDIDPNYSKAYSRLGLSYYAQGNYNDAIEKGFKKALQLDPNNEAVKENIRMAEQKLREEK 389
            K +GN  + +    DA++ YS AI L   N V YSNR+AAY +   Y +A  D  K++D+ P++ K YSR   +      + +A ++ +++ L+ + NN  +KE ++  E +L E K
Sbjct:    8 KEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEA-KRTYEEGLKHEANNLQLKEGLQNMEARLAERK 123          
BLAST of EY702741 vs. ExPASy Swiss-Prot
Match: STIP1_MOUSE (Stress-induced-phosphoprotein 1 OS=Mus musculus GN=Stip1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.910e-12
Identity = 39/117 (33.33%), Postives = 66/117 (56.41%), Query Frame = 3
Query:   39 KCQGNMVMQSQQYSDAIELYSFAIALCGHNAVYYSNRAAAYTQIHQYAEAVRDCLKSIDIDPNYSKAYSRLGLSYYAQGNYNDAIEKGFKKALQLDPNNEAVKENIRMAEQKLREEK 389
            K +GN  + +    DA++ YS AI L   N V YSNR+AAY +   Y +A  D  K++D+ P++ K YSR   +      + +A ++ +++ L+ + NN  +KE ++  E +L E K
Sbjct:    8 KEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEA-KRTYEEGLKHEANNLQLKEGLQNMEARLAERK 123          
BLAST of EY702741 vs. ExPASy Swiss-Prot
Match: STIP1_CRIGR (Stress-induced-phosphoprotein 1 OS=Cricetulus griseus GN=STIP1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.910e-12
Identity = 39/117 (33.33%), Postives = 66/117 (56.41%), Query Frame = 3
Query:   39 KCQGNMVMQSQQYSDAIELYSFAIALCGHNAVYYSNRAAAYTQIHQYAEAVRDCLKSIDIDPNYSKAYSRLGLSYYAQGNYNDAIEKGFKKALQLDPNNEAVKENIRMAEQKLREEK 389
            K +GN  + +    DA++ YS AI L   N V YSNR+AAY +   Y +A  D  K++D+ P++ K YSR   +      + +A ++ +++ L+ + NN  +KE ++  E +L E K
Sbjct:    8 KEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEA-KRTYEEGLKHEANNLQLKEGLQNMEARLAERK 123          
BLAST of EY702741 vs. ExPASy Swiss-Prot
Match: STIP1_DICDI (Protein STIP1 homolog OS=Dictyostelium discoideum GN=sti1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.094e-11
Identity = 36/111 (32.43%), Postives = 65/111 (58.56%), Query Frame = 3
Query:   36 FKCQGNMVMQSQQYSDAIELYSFAIALCGHNAVYYSNRAAAYTQIHQYAEAVRDCLKSIDIDPNYSKAYSRLGLSYYAQGNYNDAIEKGFKKALQLDPNNEAVKENIRMAE 368
            FK QGN    S+ Y+ A++ +  AI L   N + YSNR+A+   + +  +A+ D  K+I++ P++SK Y R   + Y  G + +A EK  +  L++DP N+ +++ +  A+
Sbjct:   11 FKNQGNAAFSSKDYNSAVKCFDQAIELDPSNHILYSNRSASLLALDKNEDALTDAKKAIELKPDWSKGYLRETNALYKLGRFEEA-EKSAEAGLKIDPTNQQLEDALEDAQ 120          
BLAST of EY702741 vs. ExPASy Swiss-Prot
Match: PPP5_RAT (Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus GN=Ppp5c PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.437e-11
Identity = 37/107 (34.58%), Postives = 60/107 (56.07%), Query Frame = 3
Query:   27 AEIFKCQGNMVMQSQQYSDAIELYSFAIALCGHNAVYYSNRAAAYTQIHQYAEAVRDCLKSIDIDPNYSKAYSRLGLSYYAQGNYNDAIEKGFKKALQLDPNNEAVK 347
            AE  K Q N   +++ Y +AI+ YS AI L   NA+YY NR+ AY +   Y  A+ D  ++I++D  Y K Y R   S  A G +  A+ + ++  +++ PN++  K
Sbjct:   28 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAAL-RDYETVVKVKPNDKDAK 133          
BLAST of EY702741 vs. ExPASy Swiss-Prot
Match: PPP5_MOUSE (Serine/threonine-protein phosphatase 5 OS=Mus musculus GN=Ppp5c PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.182e-11
Identity = 37/107 (34.58%), Postives = 60/107 (56.07%), Query Frame = 3
Query:   27 AEIFKCQGNMVMQSQQYSDAIELYSFAIALCGHNAVYYSNRAAAYTQIHQYAEAVRDCLKSIDIDPNYSKAYSRLGLSYYAQGNYNDAIEKGFKKALQLDPNNEAVK 347
            AE  K Q N   +++ Y +AI+ YS AI L   NA+YY NR+ AY +   Y  A+ D  ++I++D  Y K Y R   S  A G +  A+ + ++  +++ PN++  K
Sbjct:   28 AEELKTQANDYFKAKDYENAIKFYSQAIELNPGNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAAL-RDYETVVKVKPNDKDAK 133          
BLAST of EY702741 vs. ExPASy Swiss-Prot
Match: PPT1_YEAST (Serine/threonine-protein phosphatase T OS=Saccharomyces cerevisiae GN=PPT1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.429e-11
Identity = 39/119 (32.77%), Postives = 66/119 (55.46%), Query Frame = 3
Query:   39 KCQGNMVMQSQQYSDAIELYSFAIALCGHNAVYYSNRAAAYTQIHQYAEAVRDCLKSIDIDPNYSKAYSRLGLSYYAQGNYNDAIEKGFKKALQLDPNNEAVKENIRMAEQKLREEKQR 395
            K +GN+ ++ + +  AIE Y+ AI L    ++Y+SNRA A+ ++  +  A+ DC ++I +DP   KAY R  LS  A   +  A  K     L+  PN+ A  + +   ++ +REE+ R
Sbjct:   16 KNEGNVFVKEKHFLKAIEKYTEAIDLDSTQSIYFSNRAFAHFKVDNFQSALNDCDEAIKLDPKNIKAYHRRALSCMALLEFKKA-RKDLNVLLKAKPNDPAATKALLTCDRFIREERFR 133          
BLAST of EY702741 vs. ExPASy Swiss-Prot
Match: PPP5_HUMAN (Serine/threonine-protein phosphatase 5 OS=Homo sapiens GN=PPP5C PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.260e-11
Identity = 36/107 (33.64%), Postives = 60/107 (56.07%), Query Frame = 3
Query:   27 AEIFKCQGNMVMQSQQYSDAIELYSFAIALCGHNAVYYSNRAAAYTQIHQYAEAVRDCLKSIDIDPNYSKAYSRLGLSYYAQGNYNDAIEKGFKKALQLDPNNEAVK 347
            AE  K Q N   +++ Y +AI+ YS AI L   NA+YY NR+ AY +   Y  A+ D  ++I++D  Y K Y R   S  A G +  A+ + ++  +++ P+++  K
Sbjct:   28 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAAL-RDYETVVKVKPHDKDAK 133          
The following BLAST results are available for this feature:
BLAST of EY702741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
STIP1_RAT4.910e-1233.33Stress-induced-phosphoprotein 1 OS=Rattus norvegic... [more]
STIP1_MOUSE4.910e-1233.33Stress-induced-phosphoprotein 1 OS=Mus musculus GN... [more]
STIP1_CRIGR4.910e-1233.33Stress-induced-phosphoprotein 1 OS=Cricetulus gris... [more]
STIP1_DICDI1.094e-1132.43Protein STIP1 homolog OS=Dictyostelium discoideum ... [more]
PPP5_RAT2.437e-1134.58Serine/threonine-protein phosphatase 5 OS=Rattus n... [more]
PPP5_MOUSE3.182e-1134.58Serine/threonine-protein phosphatase 5 OS=Mus musc... [more]
PPT1_YEAST5.429e-1132.77Serine/threonine-protein phosphatase T OS=Saccharo... [more]
PPP5_HUMAN9.260e-1133.64Serine/threonine-protein phosphatase 5 OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-G02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702741 ID=EY702741; Name=EY702741; organism=Citrus sinensis; type=EST; length=872bp
CTCATGCATATAATCAGAAGAATCTGGCTGAGATATTTAAATGTCAAGGT
AATATGGTCATGCAGTCGCAGCAGTACTCTGATGCAATCGAGTTGTATTC
TTTTGCTATTGCACTTTGCGGACATAATGCTGTCTACTACTCTAACAGGG
CAGCTGCTTACACCCAGATCCACCAATACGCTGAAGCGGTCAGAGACTGT
CTCAAGTCCATTGATATCGACCCAAATTATAGCAAGGCATACAGCCGTCT
GGGCTTATCATATTATGCACAAGGGAACTACAACGATGCTATTGAAAAAG
GATTTAAGAAAGCCTTGCAATTGGATCCAAATAATGAAGCTGTGAAAGAG
AATATTCGGATGGCTGAGCAGAAGTTGAGAGAAGAGAAGCAACGGACAGG
ATGGGATCAGACTACGAGCTCCAGTCATTATAGCCAAGAATCAAACCAGT
CAACGGGCGGGTTCAGAAATTATGGAAACACCACCTTCATTTACAATGCC
TTTCAACACTAATGCCTTACCCTACTGATATCGCAAGCATGCTTATGAAA
ATGGGTTCAAAAATGGCTTAGGCAAAGCCTTCCTCAAAGTAAACAAGGGG
AAGATTGTAATGTGAGGGGATTCAATGAGCCCTGGAATTTAAATTGGGCG
GGAAATATCACTTTAAATTTTCGGAAAAAAATTGGCCTGAAGGACATAAC
CGGGTGAATTTGGGAAAAATGATGGGAAAAGTTTTTCTGGGCCGAACCCC
CTCAAGGGAATTCCAAACTCTTGATGGATCTGGAATCCACAAGGGGAGGG
ATGGGGAACCCCGCTTTAATATTAACGAACTTCGGGCGCATAACCTGTTT
TTTTGAGGGTGTGGGGCTATTT
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