EY702733

Overview
NameEY702733
Unique NameEY702733
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_RALSO (3-dehydroquinate synthase OS=Ralstonia solanacearum GN=aroB PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 3.049e-44
Identity = 90/167 (53.89%), Postives = 122/167 (73.05%), Query Frame = 1
Query:  346 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAELN 846
            V+VDLG+R+YPI+IG+GLL   +L   H++G + ++VTN TVAPLY  +V  A+   +    VD V+LPDGE++K  +TL ++FD  + S  DR+ T VALG GVIGDM G+AAASY+ GV FI  PTT+++QVDS VG KTGINH   KN+I AF+Q Q VLA+++
Sbjct:    4 VDVDLGERAYPIHIGTGLLSQAELFAPHIRGTRAVIVTNETVAPLYAARVEAAIR--SLGKTVDMVVLPDGESFKTWETLNRIFDALLASGADRKTTLVALGGGVIGDMTGFAAASYMRGVPFIQVPTTLLSQVDSSVGGKTGINHPLGKNMIGAFHQPQAVLADID 168          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_PSEU2 (3-dehydroquinate synthase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=aroB PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.982e-44
Identity = 90/165 (54.55%), Postives = 119/165 (72.12%), Query Frame = 1
Query:  346 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAE 840
            ++V+LG+RSYPI+IG GLLD P+LL  H+ G++V +V+N TVAPLYL+++T  L   N    V  ++LPDGE +KN +TL  +FD  + +R DRR T +ALG GVIGDM G+AAA Y  GV FI  PTT+++QVDS VG KTGINH   KN++ AFYQ   VL +
Sbjct:    4 LKVELGERSYPIHIGEGLLDQPELLTPHIVGRQVAIVSNTTVAPLYLERLTQTLAGYN----VLPIVLPDGEAFKNWETLQTIFDGLLTARHDRRTTVIALGGGVIGDMAGFAAACYQRGVNFIQIPTTLLSQVDSSVGGKTGINHPLGKNMVGAFYQPSVVLID 164          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_PSESM (3-dehydroquinate synthase OS=Pseudomonas syringae pv. tomato GN=aroB PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.982e-44
Identity = 90/165 (54.55%), Postives = 119/165 (72.12%), Query Frame = 1
Query:  346 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAE 840
            ++V+LG+RSYPI+IG GLLD P+LL  H+ G++V +V+N TVAPLYL+++T  L   N    V  ++LPDGE +KN +TL  +FD  + +R DRR T +ALG GVIGDM G+AAA Y  GV FI  PTT+++QVDS VG KTGINH   KN++ AFYQ   VL +
Sbjct:    4 LKVELGERSYPIHIGEGLLDQPELLAPHIVGRQVAIVSNTTVAPLYLERLTQTLAGYN----VLPIVLPDGEAFKNWETLQTIFDGLLTARHDRRTTVIALGGGVIGDMAGFAAACYQRGVNFIQIPTTLLSQVDSSVGGKTGINHPLGKNMVGAFYQPSVVLID 164          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_PSE14 (3-dehydroquinate synthase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=aroB PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.982e-44
Identity = 90/165 (54.55%), Postives = 119/165 (72.12%), Query Frame = 1
Query:  346 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAE 840
            ++V+LG+RSYPI+IG GLLD P+LL  H+ G++V +V+N TVAPLYL+++T  L   N    V  ++LPDGE +KN +TL  +FD  + +R DRR T +ALG GVIGDM G+AAA Y  GV FI  PTT+++QVDS VG KTGINH   KN++ AFYQ   VL +
Sbjct:    4 LKVELGERSYPIHIGEGLLDQPELLTPHIVGRQVAIVSNTTVAPLYLERLTQTLAGYN----VLPIVLPDGEAFKNWETLQTIFDGLLTARHDRRTTVIALGGGVIGDMAGFAAACYQRGVNFIQIPTTLLSQVDSSVGGKTGINHPLGKNMVGAFYQPSVVLID 164          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_CUPTR (3-dehydroquinate synthase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=aroB PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 5.200e-44
Identity = 90/167 (53.89%), Postives = 121/167 (72.46%), Query Frame = 1
Query:  346 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAELN 846
            +EVDLG+RSYPI+IGSGLLD+ +LL+ HV+G+  ++VTN TV PLY  +V  AL      V    V LPDGE +K+ +TL ++FD  +++  DR+ T VALG GV+GDM G+AAA Y+ GV FI  PTT++AQVDS VG KTGINH   KN+I AF+Q   V+A+++
Sbjct:    4 LEVDLGERSYPIHIGSGLLDNAELLRPHVRGQHAVIVTNETVGPLYAARVEQALAALGKTVRT--VTLPDGEAFKHWETLNRIFDALLQAGADRKTTLVALGGGVVGDMTGFAAACYMRGVPFIQMPTTLLAQVDSSVGGKTGINHPLGKNMIGAFHQPNAVIADID 168          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_AZOVD (3-dehydroquinate synthase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=aroB PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.791e-44
Identity = 88/165 (53.33%), Postives = 120/165 (72.73%), Query Frame = 1
Query:  346 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAE 840
            ++VDLG+RSYPIYIG+GLLD  + +  H+ G++V VVTN TVAPLYL++++  L        +  ++LPDGE +K+ +TL K+FD  +E+R DRR T +ALG GV+GDM G+AAA Y  GV FI  PTT+++QVDS VG KTGINH   KN+I AFYQ + V+ +
Sbjct:    4 LQVDLGERSYPIYIGAGLLDRAECMVPHLAGRQVAVVTNETVAPLYLERLSQTLAGHE----LTPIVLPDGEAFKHWETLQKIFDGLLEARHDRRTTLIALGGGVVGDMAGFAAACYQRGVDFIQIPTTLLSQVDSSVGGKTGINHPLGKNMIGAFYQPKAVVID 164          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_PSEU5 (3-dehydroquinate synthase OS=Pseudomonas stutzeri (strain A1501) GN=aroB PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.870e-44
Identity = 90/165 (54.55%), Postives = 119/165 (72.12%), Query Frame = 1
Query:  346 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAE 840
            ++VDLG+RSYPI+IG  L+D  DL    ++G++V +VTN TVAPLYLD++T  L+      +V  +ILPDGE++KN +TL  +FD  + +R DR  T VALG GVIGDM G+AAASY  GV FI  PTT+++QVDS VG KTGINH   KN+I AFYQ + V+ +
Sbjct:    4 LQVDLGERSYPIHIGERLIDRSDLFASKIRGRQVAIVTNETVAPLYLDRLTSTLS----GYSVTPIILPDGESHKNWETLQLIFDALLGARHDRNTTVVALGGGVIGDMAGFAAASYQRGVDFIQVPTTLLSQVDSSVGGKTGINHPLGKNMIGAFYQPRAVVID 164          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_VESOH (3-dehydroquinate synthase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=aroB PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.158e-43
Identity = 90/167 (53.89%), Postives = 116/167 (69.46%), Query Frame = 1
Query:  343 IVEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAEL 843
            I+ +DLG +SYPIYIG  LL   +LL KH+ GK+V++VTN TVAPLYL KV + L     +     VILPDGE YK +DT+  +F   +E R DR CT +ALG GV+GDM G+ AASY  GV FI  PTT+++QVDS VG KTG+NH   KN+I AF+Q + VL ++
Sbjct:    3 ILNLDLGYKSYPIYIGQNLLLKGELLTKHISGKQVMIVTNTTVAPLYLKKVQNLLL----SFEFAQVILPDGEKYKTLDTVNCIFSALLEKRFDRSCTLIALGGGVVGDMTGFVAASYQRGVNFIQIPTTLLSQVDSSVGGKTGVNHMLGKNMIGAFHQPKCVLIDI 165          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_RALEH (3-dehydroquinate synthase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=aroB PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.976e-43
Identity = 89/167 (53.29%), Postives = 121/167 (72.46%), Query Frame = 1
Query:  346 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAELN 846
            +EVDLG+RSYPI+IG+GLLD+ +LL+ HV+G+  ++VTN TV PLY  +V  AL      V    V LPDGE +K+ +TL ++FD  +++  DR+ T VALG GV+GDM G+AAA Y+ GV FI  PTT++AQVDS VG KTGINH   KN+I AF+Q   V+A+++
Sbjct:    4 LEVDLGERSYPIHIGTGLLDNAELLRPHVRGQHAVIVTNETVGPLYAARVEAALAALGKTVRT--VTLPDGEAFKHWETLNRIFDALLQAGADRKTTLVALGGGVVGDMTGFAAACYMRGVPFIQMPTTLLAQVDSSVGGKTGINHPLGKNMIGAFHQPNAVIADID 168          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_RUTMC (3-dehydroquinate synthase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=aroB PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.402e-43
Identity = 89/167 (53.29%), Postives = 118/167 (70.66%), Query Frame = 1
Query:  346 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAELN 846
            + +DL ++SYPIYIG  LL    LL KH+ GK+V++VTN TVAPLYL+KV + L     +     VILPDGE YK +DTL  +F+  +++R DR CT +ALG GV+GDM G+AAASY  GV FI  PTT+++QVDS VG KTGINH   KN+I  F+Q + VL +++
Sbjct:    4 LNLDLQEKSYPIYIGQDLLSEGKLLTKHISGKQVMIVTNTTVAPLYLEKVQNLLL----SFEFAQVILPDGEKYKTLDTLNCIFNALLKNRFDRSCTLIALGGGVVGDMTGFAAASYQRGVNFIQIPTTLLSQVDSSVGGKTGINHVLGKNMIGIFHQPKCVLIDID 166          
The following BLAST results are available for this feature:
BLAST of EY702733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AROB_RALSO3.049e-4453.893-dehydroquinate synthase OS=Ralstonia solanacearu... [more]
AROB_PSEU23.982e-4454.553-dehydroquinate synthase OS=Pseudomonas syringae ... [more]
AROB_PSESM3.982e-4454.553-dehydroquinate synthase OS=Pseudomonas syringae ... [more]
AROB_PSE143.982e-4454.553-dehydroquinate synthase OS=Pseudomonas syringae ... [more]
AROB_CUPTR5.200e-4453.893-dehydroquinate synthase OS=Cupriavidus taiwanens... [more]
AROB_AZOVD6.791e-4453.333-dehydroquinate synthase OS=Azotobacter vinelandi... [more]
AROB_PSEU58.870e-4454.553-dehydroquinate synthase OS=Pseudomonas stutzeri ... [more]
AROB_VESOH1.158e-4353.893-dehydroquinate synthase OS=Vesicomyosocius okuta... [more]
AROB_RALEH1.976e-4353.293-dehydroquinate synthase OS=Ralstonia eutropha (s... [more]
AROB_RUTMC4.402e-4353.293-dehydroquinate synthase OS=Ruthia magnifica subs... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-F05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702733 ID=EY702733; Name=EY702733; organism=Citrus sinensis; type=EST; length=906bp
AACAAAACCCCGCAACTCAAACACAACTTTAAATTCAAATCCACTCACCA
AACACAAAATCCCCGAACCAATACCCGGACTCGACCCTATTCCATGGCAT
TATCCACGGCCAACTCATTGTCTCCTTCGCTGTCATCCAAACACGCGTCC
AAACAGCCCGAGTTATATACCTGGTTTCACAGCCCTAACGCGATTGCGCT
TAAGTCTCCGCCCTTGGCACCGGCTTCTATTGAGTTGAAACGGAACGGCG
GTTTCGTCCTGGGCGAGTATAAGGTGAACCGCAGGATTTACACGAGTAGT
GCGGATCCGATGATGGATCAAACGGATAGTAAAGCTCCTACGATTGTTGA
GGTGGATTTGGGACAGCGGAGCTACCCGATTTATATCGGATCCGGACTTC
TGGATCATCCCGACCTGCTCCAAAAGCATGTTCAAGGAAAGAAAGTTCTT
GTGGTTACTAACAACACAGTTGCACCATTGTACCTGGATAAAGTTACTGA
TGCTTTGACAAGAGGGAATCCAAATGTTGCAGTTGACAATGTGATTCTGC
CAGATGGTGAGAATTACAAGAACATGGATACTCTCATGAAAGTCTTTGAC
AAGGCCATCGAGTCTCGGCTGGACCGGCGATGTACATTTGTTGCACTTGG
ACGTGGTGTTATTGGTGACATGTGTGGATATGCTGCAGCCTCCTATCTTC
CAGGTGTTACCTTCATTACAAATCCTACAACTGTTATGGCACAGGTAGAT
TCTCCTGTAGGAAGCAAAACTGGCATAAACCACCGGCCTTGCAAGAATTT
GATTTGTGCTTTCTACCAAACTCAGGGGGTTCTCGCCGAACTGAACCATT
AATTACATTGCAAAAGGGGAATGGCATAAGACTTGCACAGGTATCAAGAA
AGGGTC
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