EY702733

Overview
NameEY702733
Unique NameEY702733
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_CORGB (3-dehydroquinate synthase OS=Corynebacterium glutamicum (strain R) GN=aroB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14
Identity = 51/161 (31.68%), Postives = 84/161 (52.17%), Query Frame = 1
Query:  361 GQRSYPIYIGSGLLDHPDLLQKHVQ-GKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAE 840
            G   Y ++IGSGL +   ++Q+  + G + + + +         ++  AL      V   NV  PD EN K+++   + +D+   +   RR   + LG G   D+ G+ AA+++ GV  I  PTT++A VD+ VG KTGIN    KNL+ AF++   V  +
Sbjct:   14 GSSPYDVHIGSGLNEL--IVQRAAESGAEQVAILHQPSMDDIASELDAALVAAGLKVLHLNV--PDAENGKSLEVAGQCWDELGGAAFGRRDIVIGLGGGAATDLAGFVAAAWMRGVRVIQVPTTLLAMVDAAVGGKTGINTAAGKNLVGAFHEPDAVFID 170          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROKB_BIFLO (Bifunctional shikimate kinase/3-dehydroquinate synthase OS=Bifidobacterium longum GN=aroB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.565e-14
Identity = 48/158 (30.38%), Postives = 80/158 (50.63%), Query Frame = 1
Query:  373 YPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPL--YLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAE 840
            Y + IG G ++H       V G K   +      P+  + D+    L +G   V+  ++++PD E  K +     ++++       R    V LG G   D+ G+ AA+++ GV ++  PT+++A VD+  G KTGIN    KNL+ +FY   GVLA+
Sbjct:  187 YDVVIGEGAMNH----LVDVLGPKPAKIALIHTQPVQRHSDRARALLRQGGYEVS--DIVIPDAEPGKTITVANGIWERLGNEGFTRSDAVVGLGGGAATDLAGFVAATWMRGVRYVNCPTSLLAMVDASTGGKTGINTPQGKNLVGSFYTPAGVLAD 338          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: DOIS_STRRY (2-deoxy-scyllo-inosose synthase OS=Streptomyces rimosus subsp. paromomycinus GN=parC PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.249e-13
Identity = 52/167 (31.14%), Postives = 83/167 (49.70%), Query Frame = 1
Query:  343 IVEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLY-LDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAE 840
            +  + +   S+P  +G+   +            + LVV + TVA LY  D V        P V + +   P GE +K + T+  + ++A+ +  DRR   VALG G+ G++ G  A+    G+T +  PTTV+A +DS +  K  +N    KNL+  FYQ   VLA+
Sbjct:    3 VTAITMEDTSFPYRLGTECAEEIVARLGERAASRYLVVCDTTVAALYGRDLVARLEKDAGPAVLLTH---PAGEVHKRIGTVGDLAEQALAAGADRRSVVVALGGGITGNIAGLLASLLFRGITLVHVPTTVVAMLDSVLSLKQAVNASFGKNLVGTFYQPAEVLAD 166          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_THENV (3-dehydroquinate synthase OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=aroB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.249e-13
Identity = 45/143 (31.47%), Postives = 74/143 (51.75%), Query Frame = 1
Query:  424 KHVQGKKVLVVTNNTVAPLYLDKVTDALTRG--NPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAELN 846
            +H +G   +VV +      Y+++       G   P      + L  GE  K+++ L KV+    E   DR  T VA+G G + D+  +AA +Y+ G+  +  PTT++A VD+ +G K  ++  P KNLI  FYQ   +L +L+
Sbjct:    7 RHSRGVTEVVVGSGLQYGDYVERPVVLAEEGLRPPIPGAPTLALRGGEEVKSLEVLTKVYGFLKEVGADRSTTLVAVGGGALLDLATFAAGTYMRGIRLVHIPTTLLAMVDAALGGKGAVDWGPVKNLIGVFYQPAAILCDLS 149          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_THEAC (3-dehydroquinate synthase OS=Thermoplasma acidophilum GN=aroB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.249e-13
Identity = 40/133 (30.08%), Postives = 71/133 (53.38%), Query Frame = 1
Query:  445 VLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAEL 843
            V +++ N V  ++  K+      G+  +    + L DGE+ K +    ++    +E ++ R    V +G G +GD+ G+ AA+Y  G+  I  PTT++AQVDS +G K G++    KN+I  FY    ++ +L
Sbjct:   38 VFMISRN-VEEMFGSKIPPLENYGSSTI---KITLNDGESLKTLRNYQRIIKVLVEKKVSRNSLLVYVGGGTVGDLAGFVAATYKRGLRMIAVPTTLLAQVDSSIGGKNGLDFSDVKNVIGTFYNPYLIIDDL 166          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_PYRAE (3-dehydroquinate synthase OS=Pyrobaculum aerophilum GN=aroB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.249e-13
Identity = 44/141 (31.21%), Postives = 74/141 (52.48%), Query Frame = 1
Query:  427 HVQGKKVLVVTNNTVAPLYLDKVTDALTRG--NPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAEL 843
            H +G   +VV        Y+++    +  G  NP      + L  GE  K+++ L KV+    E+  DR  T VA+G G + D+  +AA +Y+ G+  +  PTT++A VD+ +G K  ++    KNL+  FYQ + +L +L
Sbjct:    8 HSRGVTEVVVGRGIPYDKYVERPVVLIEEGLENPLPNAPALALKGGEGVKSLEALSKVYVFLQEAEADRGSTLVAVGGGALLDLATFAAGTYMRGIGLVQVPTTLLAMVDAALGGKGAVDWGLVKNLVGVFYQPKAILCDL 148          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_MYCGI (3-dehydroquinate synthase OS=Mycobacterium gilvum (strain PYR-GCK) GN=aroB PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.632e-13
Identity = 47/157 (29.94%), Postives = 79/157 (50.32%), Query Frame = 1
Query:  373 YPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAEL 843
            YP+ IG GLL     L + + G+  + + +        + +   L+     +    + +PD E  K +  +  ++       + R+   V+LG G   D+ G+AAA++L G+  +  PTT++  VD+ VG KTGIN    KNL+ AF+Q   VL +L
Sbjct:   15 YPVIIGRGLLGD---LGRVLDGRHKVAILHQPTLTQTAEAIRTHLSE--KGIDAHRIEIPDAEGGKELPVVGFIWQVLGRIGVGRKDAIVSLGGGAATDVAGFAAATWLRGIDIVHVPTTLLGMVDAAVGGKTGINTDAGKNLVGAFHQPAAVLIDL 166          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_ARTCA (3-dehydroquinate synthase OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=aroB PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.632e-13
Identity = 55/172 (31.98%), Postives = 89/172 (51.74%), Query Frame = 1
Query:  340 TIVEV--DLGQRSYPIYIGSGLLDH-PDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAELN 846
            T+++V  +    +Y + +G GLL   P++L + V  ++VLV+    +  L  D V D L           +  PD E  K++      +    ++   R    VA+G G + D+ G+ AA++L GV  I  PT+++  VD+ VG KTGIN    KNL+ AF+    VLA+L+
Sbjct:    6 TVIKVTGESAANNYDVVVGRGLLGTLPEILGERV--RRVLVIHPRALR-LTGDTVRDDLESAGFTALTAEI--PDAEEGKHIQVAAFCWQVLGQNDFTRSDAIVAVGGGAVTDLAGFVAATWLRGVKVIHMPTSLLGMVDASVGGKTGINTAEGKNLVGAFHPPAAVLADLD 172          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: ARO1_YEAST (Pentafunctional AROM polypeptide OS=Saccharomyces cerevisiae GN=ARO1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.131e-13
Identity = 48/158 (30.38%), Postives = 81/158 (51.27%), Query Frame = 1
Query:  379 IYIGSGLLDH-PDLLQKHVQGKKVLVV--TNNTVAPLYLDKVTDALTRGNPNVAVDNVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAEL 843
            I++G  + DH  + + KH      ++   TN +  P Y   V +          +   ++  GE  K+ +T  ++ D  +     R    VA+G GVIGDM G+ A++++ GV  +  PT+++A VDS +G KT I+    KN I AF+Q + VL ++
Sbjct:   15 IHVGYNIHDHLVETIIKHCPSSTYVICNDTNLSKVPYYQQLVLEFKASLPEGSRLLTYVVKPGETSKSRETKAQLEDYLLVEGCTRDTVMVAIGGGVIGDMIGFVASTFMRGVRVVQVPTSLLAMVDSSIGGKTAIDTPLGKNFIGAFWQPKFVLVDI 172          
BLAST of EY702733 vs. ExPASy Swiss-Prot
Match: AROB_PROAC (3-dehydroquinate synthase OS=Propionibacterium acnes GN=aroB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.783e-13
Identity = 49/161 (30.43%), Postives = 80/161 (49.69%), Query Frame = 1
Query:  367 RSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVAVDNVIL---PDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGRGVIGDMCGYAAASYLPGVTFITNPTTVMAQVDSPVGSKTGINHRPCKNLICAFYQTQGVLAE 840
            + Y + IGSG +     L   V G++  VV   T+  L             P   +D++++   PD E  K  + L+  + +  E+ + R    V  G G   D+ G+ AA+++ G+  I  PTTV+A  D+ +G KTG+N    KNL+ AF++  GVL +
Sbjct:   10 KPYRVRIGSGAVHE---LAGLVAGRRAAVVCPQTLVHLV------------PRFGIDDLVVIEVPDAEAAKTPEVLVNGWRRLAEANMTRGDIIVGFGGGATTDVAGFLAATWMRGIDVIHVPTTVLAMADAAIGGKTGVNIPAGKNLVGAFHEPIGVLCD 155          
The following BLAST results are available for this feature:
BLAST of EY702733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AROB_CORGB7.324e-1431.683-dehydroquinate synthase OS=Corynebacterium gluta... [more]
AROKB_BIFLO9.565e-1430.38Bifunctional shikimate kinase/3-dehydroquinate syn... [more]
DOIS_STRRY1.249e-1331.142-deoxy-scyllo-inosose synthase OS=Streptomyces ri... [more]
AROB_THENV1.249e-1331.473-dehydroquinate synthase OS=Thermoproteus neutrop... [more]
AROB_THEAC1.249e-1330.083-dehydroquinate synthase OS=Thermoplasma acidophi... [more]
AROB_PYRAE1.249e-1331.213-dehydroquinate synthase OS=Pyrobaculum aerophilu... [more]
AROB_MYCGI1.632e-1329.943-dehydroquinate synthase OS=Mycobacterium gilvum ... [more]
AROB_ARTCA1.632e-1331.983-dehydroquinate synthase OS=Arthrobacter chloroph... [more]
ARO1_YEAST2.131e-1330.38Pentafunctional AROM polypeptide OS=Saccharomyces ... [more]
AROB_PROAC2.783e-1330.433-dehydroquinate synthase OS=Propionibacterium acn... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-F05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702733 ID=EY702733; Name=EY702733; organism=Citrus sinensis; type=EST; length=906bp
AACAAAACCCCGCAACTCAAACACAACTTTAAATTCAAATCCACTCACCA
AACACAAAATCCCCGAACCAATACCCGGACTCGACCCTATTCCATGGCAT
TATCCACGGCCAACTCATTGTCTCCTTCGCTGTCATCCAAACACGCGTCC
AAACAGCCCGAGTTATATACCTGGTTTCACAGCCCTAACGCGATTGCGCT
TAAGTCTCCGCCCTTGGCACCGGCTTCTATTGAGTTGAAACGGAACGGCG
GTTTCGTCCTGGGCGAGTATAAGGTGAACCGCAGGATTTACACGAGTAGT
GCGGATCCGATGATGGATCAAACGGATAGTAAAGCTCCTACGATTGTTGA
GGTGGATTTGGGACAGCGGAGCTACCCGATTTATATCGGATCCGGACTTC
TGGATCATCCCGACCTGCTCCAAAAGCATGTTCAAGGAAAGAAAGTTCTT
GTGGTTACTAACAACACAGTTGCACCATTGTACCTGGATAAAGTTACTGA
TGCTTTGACAAGAGGGAATCCAAATGTTGCAGTTGACAATGTGATTCTGC
CAGATGGTGAGAATTACAAGAACATGGATACTCTCATGAAAGTCTTTGAC
AAGGCCATCGAGTCTCGGCTGGACCGGCGATGTACATTTGTTGCACTTGG
ACGTGGTGTTATTGGTGACATGTGTGGATATGCTGCAGCCTCCTATCTTC
CAGGTGTTACCTTCATTACAAATCCTACAACTGTTATGGCACAGGTAGAT
TCTCCTGTAGGAAGCAAAACTGGCATAAACCACCGGCCTTGCAAGAATTT
GATTTGTGCTTTCTACCAAACTCAGGGGGTTCTCGCCGAACTGAACCATT
AATTACATTGCAAAAGGGGAATGGCATAAGACTTGCACAGGTATCAAGAA
AGGGTC
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