EY702732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702732 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.027e-26 Identity = 43/91 (47.25%), Postives = 53/91 (58.24%), Query Frame = 1 Query: 283 WDGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYYPFGLSKKPDDFSKYHAYELIHARWAMLGAAGFIIPEAFNKIGANCGPEAVWLKTGA 555 W G DR +L + P YLTGE PGDYG+ GLS P+ F++ E+IH RWAMLGA G + PE +K G G EAVW K G+ Sbjct: 49 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGS 135 HSP 2 Score: 56.6102 bits (135), Expect = 5.027e-26 Identity = 33/80 (41.25%), Postives = 45/80 (56.25%), Query Frame = 2 Query: 626 AETALVGGADYYRITNG--SDLDDMLHPDGPI*PTVIIKRP*PICMAKLKEIKKGRLAMFAMTGCFSQANAKGEGPIENL 859 ++ L+G + YR+ G + D ++P G P + P K+KEIK GRLAMF+M G F QA G+GPIENL Sbjct: 163 SQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 242
BLAST of EY702732 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 6.542e-26 Identity = 47/92 (51.09%), Postives = 53/92 (57.61%), Query Frame = 1 Query: 283 WDGPDRRIFLPDGLLDRSE-IPEYLTGEVPGDYGYYPFGLSKKPDDFSKYHAYELIHARWAMLGAAGFIIPEAFNKIGANCGPEAVWLKTGA 555 W GPDR P L SE P YLTGE PGDYG+ +S P+ F+K E+IH RWAMLGA G + PE K G G EAVW K GA Sbjct: 50 WYGPDR----PKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFG-EAVWFKAGA 136 HSP 2 Score: 56.6102 bits (135), Expect = 6.542e-26 Identity = 36/80 (45.00%), Postives = 45/80 (56.25%), Query Frame = 2 Query: 629 ETALVGGADYYRI---TNGSDLDDMLHPDGPI*PTVIIKRP*PICMAKLKEIKKGRLAMFAMTGCFSQANAKGEGPIENL 859 + L+G + YR+ T G LD +L P G P + P K+KEIK GRLAMF+M G F QA G+GPIENL Sbjct: 165 QVVLMGLIEGYRVGGGTLGEGLDPLL-PGGAFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 243
BLAST of EY702732 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.647e-23 Identity = 41/91 (45.05%), Postives = 51/91 (56.04%), Query Frame = 1 Query: 283 WDGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYYPFGLSKKPDDFSKYHAYELIHARWAMLGAAGFIIPEAFNKIGANCGPEAVWLKTGA 555 W G DR ++L G L S P YLTGE PGDYG+ GLS P+ F+K E+IH RWA+ G + PE + G G E VW K G+ Sbjct: 48 WYGADRVLYL--GPLSGSP-PSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFG-EGVWFKAGS 134 HSP 2 Score: 55.8398 bits (133), Expect = 3.647e-23 Identity = 33/80 (41.25%), Postives = 44/80 (55.00%), Query Frame = 2 Query: 629 ETALVGGADYYRITNG--SDLDDMLHPDGPI*PTVIIKRP*PICMAKLKEIKKGRLAMFAMTGCFSQANAKGEGPIENLA 862 + L+G + Y + G ++ D L+ G P + P K+KEIK GRLAMF+M G F QA G+GPIENLA Sbjct: 163 QVVLMGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLA 242
BLAST of EY702732 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.650e-23 Identity = 40/91 (43.96%), Postives = 48/91 (52.75%), Query Frame = 1 Query: 283 WDGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYYPFGLSKKPDDFSKYHAYELIHARWAMLGAAGFIIPEAFNKIGANCGPEAVWLKTGA 555 W GPDR +L E P YLTGE GLS P+ F+K E+IH+RWAMLGA G + PE + G G EAVW K G+ Sbjct: 48 WYGPDRVKYLGPF---SGEAPSYLTGEF--------HGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGS 126 HSP 2 Score: 62.3882 bits (150), Expect = 3.650e-23 Identity = 33/80 (41.25%), Postives = 47/80 (58.75%), Query Frame = 2 Query: 629 ETALVGGADYYRITNG--SDLDDMLHPDGPI*PTVIIKRP*PICMAKLKEIKKGRLAMFAMTGCFSQANAKGEGPIENLA 862 + L+G + YRI G ++ D ++P G P + P + K+KE+K GRLAMF+M G F QA G+GP+ENLA Sbjct: 155 QVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 234
BLAST of EY702732 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.745e-23 Identity = 43/91 (47.25%), Postives = 51/91 (56.04%), Query Frame = 1 Query: 283 WDGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYYPFGLSKKPDDFSKYHAYELIHARWAMLGAAGFIIPEAFNKIGANCGPEAVWLKTGA 555 W GPDR +L ++ P YL GE PGDYG+ GLS P+ F+K A E+IH RWAMLGA G I PE K E VW K G+ Sbjct: 47 WYGPDRVKYLGPF---SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGS 134 HSP 2 Score: 48.9062 bits (115), Expect = 4.745e-23 Identity = 34/87 (39.08%), Postives = 47/87 (54.02%), Query Frame = 2 Query: 611 VFAVIA-ETALVGGADYYRITN--GSDLDDMLHPDGP-I*PTVIIKRP*PICMAKLKEIKKGRLAMFAMTGCFSQANAKGEGPIENL 859 + AV+ + L+G + +RI G + L+P G P + P K+KEIK GRLAMF+M G F QA G+GP+ENL Sbjct: 156 ILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 242
BLAST of EY702732 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.359e-22 Identity = 34/74 (45.95%), Postives = 43/74 (58.11%), Query Frame = 1 Query: 343 PEYLTGEVPGDYGYYPFGLSKKPDDFSKYHAYELIHARWAMLGAAGFIIPEAF-NKIGANCGPEAVWLKTGALL 561 P TGE PGDYG+ GLS P+ F +Y ELIHAR +LGA G + PE ++ G G A+W K GA + Sbjct: 73 PRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAI 146 HSP 2 Score: 58.151 bits (139), Expect = 1.359e-22 Identity = 35/87 (40.23%), Postives = 46/87 (52.87%), Query Frame = 2 Query: 605 NLVFAVIAETALVGGADYYRITNGSDLD--DMLHPDGPI*PTVIIKRP*PICMAKLKEIKKGRLAMFAMTGCFSQANAKGEGPIENL 859 N+V + + L+G + YR+ G + D L+P P + P K+KEIK GRLAMFA G F QA G+GPIENL Sbjct: 165 NIVATLAVQVVLMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENL 251
BLAST of EY702732 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.360e-22 Identity = 41/91 (45.05%), Postives = 51/91 (56.04%), Query Frame = 1 Query: 283 WDGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYYPFGLSKKPDDFSKYHAYELIHARWAMLGAAGFIIPEAFNKIGANCGPEAVWLKTGA 555 W GPDR +L ++ P YL GE PGDYG+ GLS P+ F++ A E+IH RWAMLGA G + PE K E VW K G+ Sbjct: 50 WYGPDRVKYLGPF---SAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGS 137 HSP 2 Score: 48.9062 bits (115), Expect = 1.360e-22 Identity = 34/87 (39.08%), Postives = 48/87 (55.17%), Query Frame = 2 Query: 611 VFAVIA-ETALVGGADYYRIT--NGSDLDDMLHPDGP-I*PTVIIKRP*PICMAKLKEIKKGRLAMFAMTGCFSQANAKGEGPIENL 859 + AV+ + L+G + +RI +G + L+P G P + P K+KEIK GRLAMF+M G F QA G+GP+ENL Sbjct: 159 ILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 245
BLAST of EY702732 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.633e-19 Identity = 38/73 (52.05%), Postives = 45/73 (61.64%), Query Frame = 1 Query: 337 EIPEYLTGEVPGDYGYYPFGLSKKPDDFSKYHAYELIHARWAMLGAAGFIIPEAFNKIGANCGPEAVWLKTGA 555 E P YLTGE PGDYG+ GLS P+ F+K E+IH+R AM A G I PE + +G G EAVW K GA Sbjct: 68 EWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFG-EAVWFKAGA 139 HSP 2 Score: 43.5134 bits (101), Expect = 3.633e-19 Identity = 29/77 (37.66%), Postives = 41/77 (53.25%), Query Frame = 2 Query: 638 LVGGADYYRITNG--SDLDDMLHPDGPI*PTVIIKRP*PICMAKLKEIKKGRLAMFAMTGCFSQANAKGEGPIENLA 862 L+G + YRI G ++ D L+P G + + K+KE+K GRLAMF+M G F QA + +ENLA Sbjct: 171 LMGAVEGYRIARGPLGEVTDPLYP-GSFDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLA 246
BLAST of EY702732 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 3.569e-16 Identity = 45/91 (49.45%), Postives = 53/91 (58.24%), Query Frame = 1 Query: 283 WDGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYYPFGLSKKPDDFSKYHAYELIHARWAMLGAAGFIIPEAFNKIGANCGPEAVWLKTGA 555 W GPDR +L + P YLTGE PGDYG+ GLS P+ F+K E+IH RWAMLGA G + PE K G G EAVW K G+ Sbjct: 48 WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFG-EAVWFKAGS 134
BLAST of EY702732 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 5.667e-16 Identity = 23/52 (44.23%), Postives = 34/52 (65.38%), Query Frame = 1 Query: 343 PEYLTGEVPGDYGYYPFGLSKKPDDFSKYHAYELIHARWAMLGAAGFIIPEA 498 P +L G PGD+G+ P GL+ P++F ++ E+ H RWAML G ++PEA Sbjct: 55 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEA 106 HSP 2 Score: 46.9802 bits (110), Expect = 5.667e-16 Identity = 34/87 (39.08%), Postives = 41/87 (47.13%), Query Frame = 2 Query: 605 NLVFAVIAETALVGGADYYRITNGSDLDDMLHPDGPI*PTVIIKRP*PICMAKLKEIKKGRLAMFAMTG-CFSQANAKGEGPIENLA 862 NL + E + A+ R T D + +P G P K P KLKEIK GRLAM A G C Q+ G GP+ENLA Sbjct: 137 NLPTILAIEFLAIAFAEQQR-TMEKDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLA 222 The following BLAST results are available for this feature:
BLAST of EY702732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702732 ID=EY702732; Name=EY702732; organism=Citrus sinensis; type=EST; length=916bpback to top |