EY702732

Overview
NameEY702732
Unique NameEY702732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY702732 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12
Identity = 38/87 (43.68%), Postives = 47/87 (54.02%), Query Frame = 1 
Query:  292 PDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYYPFGLSKKPDDFSKYHAYELIHARWAMLGAAGFIIPEAFNKIGANCGPEAVWLKTG 552
            PDR ++ P      S  PE+L G +PGD+G+ P GL   P+        EL+H+RWAMLGAAG  IPE   KIG    P   W   G
Sbjct:   63 PDRPLWFPG-----STPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPS--WYTAG 142
[Close]
BLAST of EY702732 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.552e-11
Identity = 34/74 (45.95%), Postives = 43/74 (58.11%), Query Frame = 1 
Query:  292 PDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYYPFGLSKKPDDFSKYHAYELIHARWAMLGAAGFIIPEAFNKIG 513
            PDR ++ P      S  P +L G +PGD+G+ P GL+  P+        EL+H RWAMLGAAG  IPE   KIG
Sbjct:   63 PDRPLWFPG-----STPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIG 131
[Close]
BLAST of EY702732 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.457e-11
Identity = 32/70 (45.71%), Postives = 44/70 (62.86%), Query Frame = 1 
Query:  343 PEYLTGEVPGDYGYYPFGLSKKPDDFSKYHAYELIHARWAMLGAAGFIIPEAFNKIGANCGPEAVWLKTG 552
            P+YLTG + GD G+ P GL++ P++   +   EL++ RWAMLG AG ++PE F KIG    PE  W   G
Sbjct:   64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPE--WYDAG 131
The following BLAST results are available for this feature:
BLAST of EY702732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
CB12_PETHY4.083e-1243.68Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB12_SOLLC1.552e-1145.95Chlorophyll a-b binding protein 7, chloroplastic O... [more]
CB24_ARATH3.457e-1145.71Chlorophyll a-b binding protein 4, chloroplastic O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-F04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702732 ID=EY702732; Name=EY702732; organism=Citrus sinensis; type=EST; length=916bp
CCACGCGTCCGCCATTTCATTTCTCTAACACAAAGAAGCAGCAGCAGCAA
CACTCTGAAGATGGCTTCATTGGCAGCATCGTCCACTCCTGCTGCCTCCA
TTGGAGTTAAGGAGATGCTTGGCAACCCTCTCAATGTCAGCAGTGCTGTT
AAGACTTCAGCTCCAGGTGCATCAAACCCTTCTACTTTCAAGCCCGTTGC
TCTCTTCTCCAAGAAGAAAGCCGCCCCTCCTGCCAAGTCTAAGCCCGTCG
CCGTCTCCCCCGTTAACGAAGAGCTCGCCAAGTGGGATGGTCCTGACCGA
AGAATTTTCTTGCCCGATGGTCTCTTGGACAGATCTGAGATCCCTGAGTA
CTTGACCGGAGAAGTTCCCGGAGACTATGGGTACTATCCTTTTGGTCTCA
GCAAGAAACCAGACGACTTCAGCAAATATCATGCATATGAATTGATTCAT
GCCAGATGGGCCATGCTTGGTGCTGCTGGTTTCATCATTCCTGAAGCCTT
TAACAAGATTGGTGCTAACTGTGGTCCTGAAGCTGTCTGGCTCAAGACTG
GAGCTCTACTTCTTGATGGAACACATTGAACTACTTCGGAGAGACATCCC
AATCAACCTTGTGTTTGCTGTCATTGCTGAGACTGCTCTTGTAGGTGGTG
CTGACTATTATAGAATCACCAACGGGTCGGATTTGGATGACATGCTTCAC
CCAGATGGTCCAATTTGACCCACTGTGATAATCAAAAGACCCTGACCAAT
TTGCATGGCTAAACTGAAGGAGATCAAGAAGGGAAGACTTGCAATGTTTG
CCATGACTGGTTGCTTTTCTCAAGCTAATGCCAAGGGGGAAGGCCCAATT
GAGAACCTTGCTAAACTTTCAAGGATGCTTTTGCAAAACCTGCTTTACCG
GATTTCCGAAAAGGAG
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