EY702728

Overview
NameEY702728
Unique NameEY702728
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL5_TOXCI (60S ribosomal protein L5 OS=Toxoptera citricida GN=RpL5 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.222e-49
Identity = 95/149 (63.76%), Postives = 116/149 (77.85%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSDEPT-EKTRPFPALLDVALVQT 597
            K  K+K YFKRYQVK+KRRREGKTDY AR RLI QDKNKY+TPKYR +VRF+N+DIT Q+  + I GD ++ +AY+HELP+YG++VGLTNYAAAYCTGLL+ARR+LK L +D  YEG  EA GE+Y  EP  E    F   LDV L++T
Sbjct:    5 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYDTPKYRLIVRFSNRDITCQVAHSRIEGDKIVCAAYSHELPKYGVKVGLTNYAAAYCTGLLVARRLLKKLGLDRLYEGLKEANGEEYYVEPADEGPNAFRCNLDVGLMKT 153          

HSP 2 Score: 26.5646 bits (57), Expect = 3.222e-49
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  626 QGAFDGGFDFPHMENIFP 679
            +GA DGGF+ PH    FP
Sbjct:  164 KGAVDGGFNIPHSVKRFP 181          
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL5_DUNSA (60S ribosomal protein L5 OS=Dunaliella salina GN=RPL5 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 4.313e-49
Identity = 99/189 (52.38%), Postives = 131/189 (69.31%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSDEPTEK-TRPFPALLDVALVQTPLVT-VSMTLSGCIRWGI*FPSHGEHISSDLDKELNNLTL 714
            K  K+  YF RYQVKY+RRR+GKTDYRAR+RL+ QDKNKYNT KYR VVRF+NK++T QI+ ++I GD+V+A+AY+ ELP YGL+VGLTNY+AAYC GLL+ARR+L  L +   Y+G  E  GEDY+ EP E   +PF  LLD  L +T   + V   + G +  G+  P + +      DK+L+   L
Sbjct:    5 KVVKTSPYFSRYQVKYRRRRQGKTDYRARLRLVRQDKNKYNTHKYRLVVRFSNKNVTCQIVYSTIQGDVVMAAAYSKELPNYGLKVGLTNYSAAYCVGLLVARRILTKLNLADTYKGQEEPDGEDYNVEPVEDGPKPFYCLLDTGLKRTSTGSKVFAAMKGALDGGLDIPHNEKRFVGYADKKLDTEVL 193          
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL5_CHICK (60S ribosomal protein L5 OS=Gallus gallus GN=RPL5 PE=2 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 2.796e-48
Identity = 99/170 (58.24%), Postives = 121/170 (71.18%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSDEPTE-KTRPFPALLDVALVQTPLVT-VSMTLSGCIRWGI*FP 657
            K  K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI  QI  A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L    +D  YEG VE TG++Y+ E  + K   F   LD  L +T     V   L G +  G+  P
Sbjct:    5 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKIYEGQVEVTGDEYNVESVDGKPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIP 174          
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL5_HUMAN (60S ribosomal protein L5 OS=Homo sapiens GN=RPL5 PE=1 SV=3)

HSP 1 Score: 191.815 bits (486), Expect = 4.769e-48
Identity = 99/170 (58.24%), Postives = 121/170 (71.18%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSDEPTE-KTRPFPALLDVALVQTPLVT-VSMTLSGCIRWGI*FP 657
            K  K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI  QI  A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L    MD  YEG VE TG++Y+ E  + +   F   LD  L +T     V   L G +  G+  P
Sbjct:    5 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIP 174          
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL5_BOVIN (60S ribosomal protein L5 OS=Bos taurus GN=RPL5 PE=2 SV=3)

HSP 1 Score: 191.815 bits (486), Expect = 4.769e-48
Identity = 99/170 (58.24%), Postives = 121/170 (71.18%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSDEPTE-KTRPFPALLDVALVQTPLVT-VSMTLSGCIRWGI*FP 657
            K  K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI  QI  A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L    MD  YEG VE TG++Y+ E  + +   F   LD  L +T     V   L G +  G+  P
Sbjct:    5 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIP 174          
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL5B_XENLA (60S ribosomal protein L5-B OS=Xenopus laevis GN=rpl5-B PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 6.228e-48
Identity = 98/170 (57.65%), Postives = 121/170 (71.18%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSDEPTE-KTRPFPALLDVALVQTPLVT-VSMTLSGCIRWGI*FP 657
            K  K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI  QI  A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L    +D  YEG VE TG++Y+ E  + +   F   LD  L +T     V   L G +  G+  P
Sbjct:    5 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKVYEGQVEVTGDEYNVESVDGEPGAFTCYLDAGLTRTTTGNKVFGALKGAVDGGLSIP 174          
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL5A_XENLA (60S ribosomal protein L5-A OS=Xenopus laevis GN=rpl5-A PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 6.228e-48
Identity = 98/170 (57.65%), Postives = 121/170 (71.18%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSDEPTE-KTRPFPALLDVALVQTPLVT-VSMTLSGCIRWGI*FP 657
            K  K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI  QI  A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L    +D  YEG VE TG++Y+ E  + +   F   LD  L +T     V   L G +  G+  P
Sbjct:    5 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGIKVGLTNYAAAYCTGLLLARRLLNKFGLDKVYEGQVEVTGDEYNVESIDGEPGAFTCYLDAGLTRTTTGNKVFGALKGAVDGGLSIP 174          
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL5_MACFA (60S ribosomal protein L5 OS=Macaca fascicularis GN=RPL5 PE=2 SV=3)

HSP 1 Score: 190.274 bits (482), Expect = 1.388e-47
Identity = 98/170 (57.65%), Postives = 121/170 (71.18%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSDEPTE-KTRPFPALLDVALVQTPLVT-VSMTLSGCIRWGI*FP 657
            K  K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI  QI  A I GD+++ +AYAH+LP+YG++VGLTNYAAAYCTGLLLARR+L    MD  YEG VE TG++Y+ E  + +   F   LD  L +T     V   L G +  G+  P
Sbjct:    5 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHKLPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIP 174          
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL5_HELAN (60S ribosomal protein L5 OS=Helianthus annuus GN=RPL5A PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.388e-47
Identity = 95/149 (63.76%), Postives = 115/149 (77.18%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSDEPTEK-TRPFPALLDVALVQT 597
            K  K+K YFKRYQVK+KRRREGKTDY AR RLI QDKNKYNTPKYR VVRF+N+DIT Q+  + I GD +L +AYAHELP+YG++VGLTNYAAAYCTGLLLAR++L  L +D  Y G  E TGE+++ +P E     F   LDV L++T
Sbjct:    5 KVVKNKQYFKRYQVKFKRRREGKTDYFARKRLIAQDKNKYNTPKYRLVVRFSNRDITCQVAYSRIEGDKILCAAYAHELPQYGVKVGLTNYAAAYCTGLLLARKLLSQLGLDKLYIGSTEVTGEEFNVKPVEDGPGAFRCYLDVGLMRT 153          
BLAST of EY702728 vs. ExPASy Swiss-Prot
Match: RL5_DROME (60S ribosomal protein L5 OS=Drosophila melanogaster GN=RpL5 PE=1 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 3.091e-47
Identity = 98/170 (57.65%), Postives = 120/170 (70.59%), Query Frame = 1
Query:  154 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSDEPTEK-TRPFPALLDVALVQTPL-VTVSMTLSGCIRWGI*FP 657
            K  K+K YFKRYQVK++RRREGKTDY AR RL  QDKNKYNTPKYR +VR +NKDIT QI  A I GD V+ +AY+HELP+YG++VGLTNYAAAYCTGLL+ARRVL  L +D+ Y G  E TGE+++ EP +     F   LDV L +T     V   + G +  G+  P
Sbjct:    5 KVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDITVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIP 174          
The following BLAST results are available for this feature:
BLAST of EY702728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
RL5_TOXCI3.222e-4963.7660S ribosomal protein L5 OS=Toxoptera citricida GN... [more]
RL5_DUNSA4.313e-4952.3860S ribosomal protein L5 OS=Dunaliella salina GN=R... [more]
RL5_CHICK2.796e-4858.2460S ribosomal protein L5 OS=Gallus gallus GN=RPL5 ... [more]
RL5_HUMAN4.769e-4858.2460S ribosomal protein L5 OS=Homo sapiens GN=RPL5 P... [more]
RL5_BOVIN4.769e-4858.2460S ribosomal protein L5 OS=Bos taurus GN=RPL5 PE=... [more]
RL5B_XENLA6.228e-4857.6560S ribosomal protein L5-B OS=Xenopus laevis GN=rp... [more]
RL5A_XENLA6.228e-4857.6560S ribosomal protein L5-A OS=Xenopus laevis GN=rp... [more]
RL5_MACFA1.388e-4757.6560S ribosomal protein L5 OS=Macaca fascicularis GN... [more]
RL5_HELAN1.388e-4763.7660S ribosomal protein L5 OS=Helianthus annuus GN=R... [more]
RL5_DROME3.091e-4757.6560S ribosomal protein L5 OS=Drosophila melanogaste... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-E12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702728 ID=EY702728; Name=EY702728; organism=Citrus sinensis; type=EST; length=940bp
GGNNGNGCATTTGCCACCCTTGGCCCTTTCCGGACTTCTTCCTCGACCAC
GCGTCCGGTTAGGGTTTACCACATTGGATTTAGCTCGCGGCTCCTTCACA
ACTTCTCGAACTCTGCTGCTTCTACACTTTGAGCTTCAGCAATGGCCTTT
GCCAAAGCTCAAAAGTCAAAAGCTTACTTTAAGCGATATCAAGTTAAGTA
CAAGAGAAGGCGAGAGGGAAAGACTGACTATCGGGCTAGGATTCGCCTGA
TCAACCAAGATAAAAACAAGTACAACACGCCAAAGTATCGGTTTGTTGTG
CGATTCACCAACAAAGATATCACTGCACAAATTATATCTGCCAGCATAGC
CGGGGATATAGTCCTTGCATCTGCTTATGCCCATGAGCTTCCCCGTTATG
GACTTGAGGTGGGCCTCACTAATTATGCAGCAGCTTATTGCACTGGACTC
CTCTTGGCCCGCCGAGTCCTGAAAATGCTTGAGATGGATGCTGAGTATGA
GGGGCACGTTGAGGCAACAGGAGAGGACTATTCAGATGAGCCAACTGAGA
AAACGAGGCCTTTCCCCGCCCTGCTTGATGTCGCTCTTGTGCAAACACCA
CTGGTAACCGTGTCTATGACGCTTTCAGGGTGCATTCGATGGGGGATTTG
ATTTCCCTCACATGGAGAACATATTTCCTCTGATCTCGATAAGGAATTAA
ACAATTTGACCCTCAACTTCACCCCCAAAACATAATATGTCATCACCCCC
CGCCCTACTCGAGGACGTTGGTTCGCAAACCAGCGCGACAACCGCCAGAC
CCGCGTGTGTGTAAAAGTTCCCAAAAGCACAGCCGCAAAAACCTCACATA
GCTGACTACAAACCGACACTCTAGTCATCGGTACAAACCGTATTCTCGGA
AATATTAGGAAGGAACCCCCTCATCAGGATCTTAGGACAC
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