EY702726

Overview
NameEY702726
Unique NameEY702726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702726_ssr18 microsatellite EY702726_ssr18:18..35. BLAST: Citrus ESTs to Prunus persica proteins V1
EY702726_ssr37 microsatellite EY702726_ssr37:37..74. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2830 contig Csv1_Contig2830:11..870. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702726 vs. ExPASy Swiss-Prot
Match: DNAK_XANCB (Chaperone protein dnaK OS=Xanthomonas campestris pv. campestris (strain B100) GN=dnaK PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.424e-41
Identity = 85/155 (54.84%), Postives = 114/155 (73.55%), Query Frame = 2
Query:  380 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMV--EVDEESKQVSYRVVRDENGNVKLECPAIGKQFAAEEISAQVLRKLVDDASKFFNDSVTKAVVTVPAYFNDSQRQAQR 838
            K++GIDLGTTNS VA M+GGK  ++ N+EG RTTPS+VAYTK+G+ LVG  AKRQAV NP+NTF++VKR IGRK    EV ++   V Y ++  +NG+  ++  +  K+ A +EISA+VL K+   A  F  + VT+AV+TVPAYFNDSQRQA +
Sbjct:    3 KIIGIDLGTTNSCVAIMDGGKARVIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDGEVQKDISHVPYGILAHDNGDAWVQ-TSDSKRMAPQEISARVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATK 156          
BLAST of EY702726 vs. ExPASy Swiss-Prot
Match: DNAK_XANC8 (Chaperone protein dnaK OS=Xanthomonas campestris pv. campestris (strain 8004) GN=dnaK PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.424e-41
Identity = 85/155 (54.84%), Postives = 114/155 (73.55%), Query Frame = 2
Query:  380 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMV--EVDEESKQVSYRVVRDENGNVKLECPAIGKQFAAEEISAQVLRKLVDDASKFFNDSVTKAVVTVPAYFNDSQRQAQR 838
            K++GIDLGTTNS VA M+GGK  ++ N+EG RTTPS+VAYTK+G+ LVG  AKRQAV NP+NTF++VKR IGRK    EV ++   V Y ++  +NG+  ++  +  K+ A +EISA+VL K+   A  F  + VT+AV+TVPAYFNDSQRQA +
Sbjct:    3 KIIGIDLGTTNSCVAIMDGGKARVIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDGEVQKDISHVPYGILAHDNGDAWVQ-TSDSKRMAPQEISARVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATK 156          
BLAST of EY702726 vs. ExPASy Swiss-Prot
Match: DNAK_XYLFA (Chaperone protein dnaK OS=Xylella fastidiosa GN=dnaK PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.389e-41
Identity = 85/155 (54.84%), Postives = 114/155 (73.55%), Query Frame = 2
Query:  380 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--VEVDEESKQVSYRVVRDENGNVKLECPAIGKQFAAEEISAQVLRKLVDDASKFFNDSVTKAVVTVPAYFNDSQRQAQR 838
            K++GIDLGTTNS +A +EGGK  ++ N+EG RTTPS+VAYTK+G+ LVG  AKRQAV NP+NTF++VKR IGRK    EV ++   V Y++ + +NG+  +   A  K+ A +EISA+VL K+   A  F  + VT+AV+TVPAYFNDSQRQA +
Sbjct:    3 KIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWV-ATADAKKLAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATK 156          
BLAST of EY702726 vs. ExPASy Swiss-Prot
Match: DNAK_METCA (Chaperone protein dnaK OS=Methylococcus capsulatus GN=dnaK PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.389e-41
Identity = 85/155 (54.84%), Postives = 113/155 (72.90%), Query Frame = 2
Query:  380 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMVE--VDEESKQVSYRVVRDENGNVKLECPAIGKQFAAEEISAQVLRKLVDDASKFFNDSVTKAVVTVPAYFNDSQRQAQR 838
            K++GIDLGTTNS VA +EGGKP ++ N+EG RTTPS+VA+T + + LVGQ AKRQA+ NP+NT F++KR IGR+  +  V ++ K V Y +V  ENG+  +E    GK+ A  EISA+VL KL  DA  +  + V +AV+TVPAYFNDSQRQA +
Sbjct:    3 KIIGIDLGTTNSCVAILEGGKPRVIENSEGARTTPSIVAFTADNEVLVGQSAKRQAITNPKNTLFAIKRLIGRRYKDDVVQKDIKMVPYTIVEAENGDAWVEVG--GKKMAPPEISARVLMKLKKDAEAYLGEEVKEAVITVPAYFNDSQRQATK 155          
BLAST of EY702726 vs. ExPASy Swiss-Prot
Match: DNAK_CHLT3 (Chaperone protein dnaK OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=dnaK PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.389e-41
Identity = 84/154 (54.55%), Postives = 112/154 (72.73%), Query Frame = 2
Query:  380 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMVEVDEESKQVSYRVVRDEN-GNVKLECPAIGKQFAAEEISAQVLRKLVDDASKFFNDSVTKAVVTVPAYFNDSQRQAQR 838
            K++GIDLGTTNS VA M+G  P ++ NAEG RTTPS+VA+TK+G+RLVG  AKRQA+ N  NT FS+KRF+GR   EV EE+K V Y++V + N   VK+      K  + +EISA +L+K+ + A  F  + VT+AV+TVPAYFND+QRQA +
Sbjct:    3 KIIGIDLGTTNSCVAVMQGKDPVVIANAEGYRTTPSMVAFTKSGERLVGHAAKRQAITNATNTIFSIKRFMGRTQDEVPEETKMVPYQIVSEGNQARVKIG----DKTHSPQEISAMILQKMKETAEDFLGEKVTEAVITVPAYFNDAQRQATK 152          
BLAST of EY702726 vs. ExPASy Swiss-Prot
Match: DNAK_STRM5 (Chaperone protein dnaK OS=Stenotrophomonas maltophilia (strain R551-3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.096e-40
Identity = 85/155 (54.84%), Postives = 113/155 (72.90%), Query Frame = 2
Query:  380 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKM--VEVDEESKQVSYRVVRDENGNVKLECPAIGKQFAAEEISAQVLRKLVDDASKFFNDSVTKAVVTVPAYFNDSQRQAQR 838
            K++GIDLGTTNS VA M+GGK  ++ N+EG RTTPS+VAYTK+G+ LVG  AKRQAV NP+NTF++VKR IGRK    EV ++   V Y ++  +NG+  +   +  K+ A +EISA+VL K+   A  F  + VT+AV+TVPAYFNDSQRQA +
Sbjct:    3 KIIGIDLGTTNSCVAIMDGGKARVIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDAEVQKDIAHVPYSILAHDNGDAWV-ATSDAKKMAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATK 156          
BLAST of EY702726 vs. ExPASy Swiss-Prot
Match: DNAK_SPHWW (Chaperone protein dnaK OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=dnaK PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.096e-40
Identity = 82/155 (52.90%), Postives = 117/155 (75.48%), Query Frame = 2
Query:  380 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMVE--VDEESKQVSYRVVRDENGNVKLECPAIGKQFAAEEISAQVLRKLVDDASKFFNDSVTKAVVTVPAYFNDSQRQAQR 838
            KV+GIDLGTTNS VA MEGGKP ++ NAEG RTTPS+VA+ K+G+RL+GQ AKRQAV NP+NT F+VKR IGR+  +    ++++ V Y +V+  NG+  ++  A G+ ++  +ISA  L+K+ + A  +  ++VT+AV+TVPAYFND+QRQA +
Sbjct:    3 KVIGIDLGTTNSCVAVMEGGKPKVIENAEGARTTPSIVAFAKDGERLIGQPAKRQAVTNPDNTIFAVKRLIGRRFDDPITRKDTELVPYHIVKGPNGDAWVQ--AGGEDYSPSQISAFTLQKMKETAESYLGETVTQAVITVPAYFNDAQRQATK 155          
BLAST of EY702726 vs. ExPASy Swiss-Prot
Match: DNAK_SALRD (Chaperone protein dnaK OS=Salinibacter ruber (strain DSM 13855) GN=dnaK PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.096e-40
Identity = 87/152 (57.24%), Postives = 111/152 (73.03%), Query Frame = 2
Query:  380 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMVEVDEESKQVSYRVVRDENGNVKLECPAIG-KQFAAEEISAQVLRKLVDDASKFFNDSVTKAVVTVPAYFNDSQRQA 832
            KV+GIDLGTTNS VA MEG  P ++ NAEG RTTPSVVAY  +G+RLVG  AKRQA+ NPENT  S+KRF+GR   EV++E ++V Y VVR EN   +++   IG +++  +EISA VL+KL   A  +    VT AV+TVPAYFND+QR+A
Sbjct:    3 KVIGIDLGTTNSVVAVMEGDDPEVIENAEGSRTTPSVVAYKDDGERLVGAPAKRQAITNPENTVSSIKRFMGRFYDEVEDEIEEVPYEVVRGENDTARVQ---IGDRKYTPQEISAVVLQKLKQTAEDYLGQEVTDAVITVPAYFNDAQRKA 151          
BLAST of EY702726 vs. ExPASy Swiss-Prot
Match: DNAK_RUBXD (Chaperone protein dnaK OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=dnaK PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.096e-40
Identity = 83/154 (53.90%), Postives = 116/154 (75.32%), Query Frame = 2
Query:  380 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYT-KNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMVEVDEESKQVSYRVVRDENGNVKLECPAIGKQFAAEEISAQVLRKLVDDASKFFNDSVTKAVVTVPAYFNDSQRQAQR 838
            K +GIDLGTTNS VA +EGG P ++ NAEG+RTTPSVVA+  K+G+RLVGQ+A+RQAV NPE T +S+KRF+GR+  +V +E+++V Y+VV   +G+V++      K ++  EISA +L+KL  DA  +  + VT AV+TVPAYF D+QRQA +
Sbjct:    3 KSIGIDLGTTNSCVAVLEGGDPVVIPNAEGERTTPSVVAFDRKSGERLVGQLARRQAVTNPERTVYSIKRFMGRRYNDVKQEAERVGYQVVPGPHGDVRVRLG--DKDYSPPEISAMILQKLKRDAEDYLGEEVTDAVITVPAYFEDAQRQATK 154          
BLAST of EY702726 vs. ExPASy Swiss-Prot
Match: DNAK_NITMU (Chaperone protein dnaK OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=dnaK PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.096e-40
Identity = 85/155 (54.84%), Postives = 112/155 (72.26%), Query Frame = 2
Query:  380 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMVE--VDEESKQVSYRVVRDENGNVKLECPAIGKQFAAEEISAQVLRKLVDDASKFFNDSVTKAVVTVPAYFNDSQRQAQR 838
            K++GIDLGTTNS VA ME GKP ++ N+EG RTTPS+VAYT++G+ LVG  AKRQAV NP+NT F+VKR IGR+  E  V  + K V Y +++ +N +  +E    GK+ A  E+SAQVL K+   A  +  + VT+AV+TVPAYFNDSQRQA +
Sbjct:    3 KIIGIDLGTTNSCVAVMESGKPKVIENSEGARTTPSIVAYTEDGEILVGASAKRQAVTNPKNTLFAVKRLIGRRFNEEMVQRDIKMVPYTIIKADNNDAWIE--VRGKKVAPPEVSAQVLMKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATK 155          
The following BLAST results are available for this feature:
BLAST of EY702726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_XANCB6.424e-4154.84Chaperone protein dnaK OS=Xanthomonas campestris p... [more]
DNAK_XANC86.424e-4154.84Chaperone protein dnaK OS=Xanthomonas campestris p... [more]
DNAK_XYLFA8.389e-4154.84Chaperone protein dnaK OS=Xylella fastidiosa GN=dn... [more]
DNAK_METCA8.389e-4154.84Chaperone protein dnaK OS=Methylococcus capsulatus... [more]
DNAK_CHLT38.389e-4154.55Chaperone protein dnaK OS=Chloroherpeton thalassiu... [more]
DNAK_STRM51.096e-4054.84Chaperone protein dnaK OS=Stenotrophomonas maltoph... [more]
DNAK_SPHWW1.096e-4052.90Chaperone protein dnaK OS=Sphingomonas wittichii (... [more]
DNAK_SALRD1.096e-4057.24Chaperone protein dnaK OS=Salinibacter ruber (stra... [more]
DNAK_RUBXD1.096e-4053.90Chaperone protein dnaK OS=Rubrobacter xylanophilus... [more]
DNAK_NITMU1.096e-4054.84Chaperone protein dnaK OS=Nitrosospira multiformis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-E10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702726 ID=EY702726; Name=EY702726; organism=Citrus sinensis; type=EST; length=860bp
CAAGAACTATAACTGAACTCTCTCTCTCTCTCTCTTACACACACACACAC
ACACACACACACACACACACACACAAATAAGACCGCATTCAAATTCCCAC
ATATCTCACTGAAATAACAAAAGGGCTTGTTTAATTTTCTGAAATATAAG
CATGGCTTGTTCATCGGCAGCTCAAATTCATTTCCTCGGTAATATTTCAT
TGTCGTCGAGAAAAAACAGTAAAAACGGTCGTCAGAACACGGCGGGGTCG
AGAAATTTGTTTTTTGGGAAAAGGGTTGGCGGGAACCGATTCGGGTCGGT
TCCAAGCGCTGCGTTTTTGAGGTTGAAGAGTGAGAACAGAGGGGGAAGGT
ATGTGGGGCCGGTGAGGGTGGTGAATGAGAAGGTGGTGGGGATTGATTTG
GGGACGACGAATTCGGCTGTCGCGGCTATGGAAGGAGGGAAGCCGACTAT
AGTGACGAATGCTGAGGGGCAAAGAACGACGCCGTCTGTGGTGGCGTACA
CGAAGAATGGGGATAGGTTGGTGGGTCAGATTGCGAAGAGGCAGGCGGTC
GTGAACCCGGAGAACACCTTCTTTTCGGTGAAGAGGTTTATTGGGAGGAA
GATGGTGGAGGTTGATGAGGAATCGAAGCAGGTTTCGTATAGAGTTGTGA
GAGATGAGAATGGGAATGTGAAGTTGGAGTGTCCTGCTATCGGCAAGCAG
TTTGCTGCTGAAGAGATTTCGGCCCAGGTCTTGAGAAAGCTTGTCGATGA
TGCGTCCAAGTTCTTTAATGATAGTGTGACTAAAGCAGTGGTCACAGTGC
CTGCTTACTTCAATGATTCCCAGAGACAAGCACAAAGGATGCTGGTCGAT
TGGCTGCTTT
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