EY702724

Overview
NameEY702724
Unique NameEY702724
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_MONBE (40S ribosomal protein SA OS=Monosiga brevicollis GN=30792 PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 6.146e-63
Identity = 111/206 (53.88%), Postives = 153/206 (74.27%), Query Frame = 3
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTH-AHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            L   EADIQ +L A+VHLG  NC   M +YV+KRR+DG+ +I+L KT+EK+ +AAR+I A+++P ++   S R +GQRA+LKF  +   A  IAGR TPG FTNQ+Q +F EPRLL+LTDP  DHQ ++EA+  NIP I+ CD D+P+RYVD+ IP NNK  H+IG ++W+LAR VL++RGT+    +WDVM DL+F+R+PEE  +
Sbjct:    8 LKPTEADIQKLLMAKVHLGASNCTTAMSKYVYKRRSDGVNVIDLNKTYEKIVLAARIIAAVDSPANVCAISGRNFGQRAILKFCNHIGGAFPIAGRFTPGAFTNQIQKAFQEPRLLVLTDPLVDHQAVREASYVNIPIISLCDVDAPLRYVDVVIPCNNKSPHAIGIVWWMLAREVLRLRGTLPRDAEWDVMPDLYFFRDPEEIKK 213          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_CLAL4 (40S ribosomal protein S0 OS=Clavispora lusitaniae (strain ATCC 42720) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 6.146e-63
Identity = 118/206 (57.28%), Postives = 148/206 (71.84%), Query Frame = 3
Query:  108 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYREPEE 722
            P   +    D +++LAA VHLG+KN     E YV+K R DG+ +IN+ KTWEK+ +AAR+I AI N  D++V S+R +GQRAVLKFA +T A  IAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKE++  NIP IA  D DSP  YVD+ IP NNKGKHSIG ++WLLAR VL++RG I     +W VM DL+FYR+PEE
Sbjct:    4 PESFALTAEDAKLLLAANVHLGSKNVQVHNEPYVYKTRPDGVNVINIAKTWEKIVLAARIIAAIPNASDVVVCSSRTFGQRAVLKFASHTGATPIAGRFTPGNFTNYITRSFKEPRLVIVTDPRTDAQAIKESSYVNIPVIALSDVDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLRLRGIIPDREAEWSVMPDLYFYRDPEE 209          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_LODEL (40S ribosomal protein S0 OS=Lodderomyces elongisporus GN=RPS0 PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.048e-62
Identity = 119/206 (57.77%), Postives = 148/206 (71.84%), Query Frame = 3
Query:  108 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFYREPEE 722
            P        D +++LAA VHLG+KN     + YV+K R DG+ IIN+GKTWEK+ +AAR+I A+ N  D+ V S+R +GQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKE++  NIP IA  D DSP  YVD+ IP NNKGKHSIG ++WLLAR VL++RG I     +W VM DL+FYR+PEE
Sbjct:    4 PASFDLTPEDAKLLLAANVHLGSKNVQVHNKPYVYKTRPDGVNIINIGKTWEKIVLAARIIAAVPNSSDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVIVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLRLRGIIADRTTEWSVMPDLYFYRDPEE 209          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_THEPA (40S ribosomal protein SA OS=Theileria parva GN=TP04_0748 PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.369e-62
Identity = 112/208 (53.85%), Postives = 151/208 (72.60%), Query Frame = 3
Query:   99 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEE 722
            A    +L+  E  I+MML A+VH+GTKN + +M +YV+ R  +G+++INL  T EKL++AAR IV + NP +++V SARPYG RAVLKF+ Y  +H IAGR  PGT TNQ+   F EPRLL+ TDPRTD Q ++E++  ++P IA CDTDSP+ YVDI IP NNKGK SI  ++WLLAR VL +R  ++    WDV+VD FF+R+PE+
Sbjct:    2 AAPTSKLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKVAARAIVTVSNPEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIEPRLLVATDPRTDAQSLRESSYVSLPVIALCDTDSPLNYVDIAIPCNNKGKESIALMYWLLAREVLYLRDQLKRWMPWDVLVDTFFWRDPEQ 209          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_PICST (40S ribosomal protein S0 OS=Pichia stipitis GN=RPS0 PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.788e-62
Identity = 116/206 (56.31%), Postives = 148/206 (71.84%), Query Frame = 3
Query:  108 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFYREPEE 722
            P        D +++LAA VHLG+KN     + YV+K R DG+ +IN+GKTWEK+ +AAR+I A+ NP D+ V S+R +GQRAVLKFA +T A  IAGR TPG FTN +  SF EPRL+++TDPRTD Q IKE++  NIP IA  D DSP  YVD+ IP NNKGKHSIG ++WL+AR VL++RG I     +W VM DL+FYR+PEE
Sbjct:    4 PASFDLTPEDAKLLLAANVHLGSKNVQVHNKPYVYKTRPDGVNVINIGKTWEKIVLAARIIAAVPNPSDVAVCSSRTFGQRAVLKFAAHTGATPIAGRFTPGNFTNYITRSFKEPRLVVVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLIAREVLRLRGIIPDRTTEWSVMPDLYFYRDPEE 209          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_CRYHO (40S ribosomal protein SA OS=Cryptosporidium hominis GN=Chro.30246 PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.336e-62
Identity = 114/205 (55.61%), Postives = 150/205 (73.17%), Query Frame = 3
Query:  108 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEE 722
            P   ++K  DI  M+  + H+GTKN + +M  YV+KR ++GI++INL KTWEK+Q+AAR+I  I+N  D++V S RPYG R  LKFA++T AHA+ GR TPGT TNQ+   F EPRLLI+TDPR D Q + E++  NIP IA CDTDSP++YVD+ IP NNKGK SI  +++LLAR V  +RG      KWDVMVD+FF+R+PEE
Sbjct:    2 PPAETRKLDDIAKMIVCKTHIGTKNVEDKMLSYVYKRTHEGIFLINLAKTWEKIQIAARIIATIDNLADVVVVSQRPYGSRPALKFAQHTGAHAMVGRFTPGTLTNQITQKFMEPRLLIVTDPRVDSQAVIESSYANIPVIALCDTDSPLQYVDVAIPCNNKGKESIALMYYLLAREVNFLRGKT---DKWDVMVDVFFWRDPEE 203          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_CANDC (40S ribosomal protein S0 OS=Candida dubliniensis (strain CD36 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.984e-62
Identity = 118/209 (56.46%), Postives = 148/209 (70.81%), Query Frame = 3
Query:  108 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFYREPEETSR 731
            P        D +++LAA VHLG KN     + YV+K R DG+ IIN+GKTWEK+ +AAR+I A+ N  D+ V S+R +GQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKE++  NIP IA  D DSP  YVD+ IP NNKGKHSIG ++WL+AR VL++RG I     +W VM DL+FYR+PEE  +
Sbjct:    4 PASFDLTPEDAKLLLAANVHLGAKNVQVHNKPYVYKTRPDGMNIINIGKTWEKIVLAARIIAAVPNASDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVIVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLIAREVLRLRGIIPDRTTEWSVMPDLYFYRDPEEVEQ 212          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_CANAW (40S ribosomal protein S0 OS=Candida albicans (strain WO-1) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.984e-62
Identity = 118/206 (57.28%), Postives = 147/206 (71.36%), Query Frame = 3
Query:  108 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFYREPEE 722
            P        D +++LAA VHLG KN     + YV+K R DG+ IIN+GKTWEK+ +AAR+I A+ N  D+ V S+R +GQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+++TDPRTD Q IKE++  NIP IA  D DSP  YVD+ IP NNKGKHSIG ++WLLAR VL++RG I     +W VM DL+FYR+PEE
Sbjct:    4 PASFDLTPEDAKLLLAANVHLGAKNVQVHNKPYVYKTRPDGMNIINIGKTWEKIVLAARIIAAVPNASDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVVVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLRLRGIIPDRTTEWSVMPDLYFYRDPEE 209          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_CANAL (40S ribosomal protein S0 OS=Candida albicans GN=RPS0 PE=2 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 3.984e-62
Identity = 118/206 (57.28%), Postives = 147/206 (71.36%), Query Frame = 3
Query:  108 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFYREPEE 722
            P        D +++LAA VHLG KN     + YV+K R DG+ IIN+GKTWEK+ +AAR+I A+ N  D+ V S+R +GQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+++TDPRTD Q IKE++  NIP IA  D DSP  YVD+ IP NNKGKHSIG ++WLLAR VL++RG I     +W VM DL+FYR+PEE
Sbjct:    4 PASFDLTPEDAKLLLAANVHLGAKNVQVHNKPYVYKTRPDGMNIINIGKTWEKIVLAARIIAAVPNASDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVVVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLRLRGIIPDRTTEWSVMPDLYFYRDPEE 209          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_CANTR (40S ribosomal protein S0 OS=Candida tropicalis GN=RPS0 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.795e-62
Identity = 119/206 (57.77%), Postives = 146/206 (70.87%), Query Frame = 3
Query:  108 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFYREPEE 722
            P        D +++LA  VHLG+KN     + YV+K R DG+ IIN+GKTWEK+ +AAR+I AI N  D+ V S+R +GQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKE++  NIP IA  D DSP  YVD+ IP NNKGKHSIG ++WLLAR VL+ RG I     +W VM DL+FYR+PEE
Sbjct:    4 PASFDLTPEDAKLLLAGNVHLGSKNVQVHNKPYVYKTRPDGVNIINIGKTWEKIVLAARIIAAIPNANDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVIVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLRSRGIIPDRTTEWSVMPDLYFYRDPEE 209          
The following BLAST results are available for this feature:
BLAST of EY702724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
RSSA_MONBE6.146e-6353.8840S ribosomal protein SA OS=Monosiga brevicollis G... [more]
RSSA_CLAL46.146e-6357.2840S ribosomal protein S0 OS=Clavispora lusitaniae ... [more]
RSSA_LODEL1.048e-6257.7740S ribosomal protein S0 OS=Lodderomyces elongispo... [more]
RSSA_THEPA1.369e-6253.8540S ribosomal protein SA OS=Theileria parva GN=TP0... [more]
RSSA_PICST1.788e-6256.3140S ribosomal protein S0 OS=Pichia stipitis GN=RPS... [more]
RSSA_CRYHO2.336e-6255.6140S ribosomal protein SA OS=Cryptosporidium homini... [more]
RSSA_CANDC3.984e-6256.4640S ribosomal protein S0 OS=Candida dubliniensis (... [more]
RSSA_CANAW3.984e-6257.2840S ribosomal protein S0 OS=Candida albicans (stra... [more]
RSSA_CANAL3.984e-6257.2840S ribosomal protein S0 OS=Candida albicans GN=RP... [more]
RSSA_CANTR6.795e-6257.7740S ribosomal protein S0 OS=Candida tropicalis GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-E08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702724 ID=EY702724; Name=EY702724; organism=Citrus sinensis; type=EST; length=875bp
TTCCGTCGACCCACGCGTCCGAGCAGAAGTCTCCGTCGGTACCACGAGTC
TCAGCTTTCTCTCGCAGGTTTTGAGAAATAAAGATGGCGACCGGAACAGC
AACGGCCCCGAGGCAGCTCTCTCAGAAAGAGGCTGACATTCAGATGATGT
TAGCCGCCGAAGTTCATTTGGGTACTAAGAACTGTGACTTCCAAATGGAA
CGTTACGTGTTCAAGCGCCGAAACGATGGAATTTATATTATCAATCTTGG
CAAGACTTGGGAGAAGCTACAGATGGCGGCCAGGGTTATCGTAGCCATTG
AAAACCCTGGGGACATTATTGTCCAATCAGCTAGACCCTATGGACAGCGA
GCTGTGTTGAAGTTTGCAAAGTACACTCACGCCCATGCCATTGCTGGCAG
GCACACTCCTGGTACATTTACCAATCAAATGCAAACATCATTCAATGAGC
CCCGACTTCTCATTCTAACAGATCCACGAACAGACCATCAGCCAATTAAG
GAAGCTGCTCTTGGAAACATTCCCACCATTGCCTTTTGTGACACTGACTC
ACCTATGCGTTATGTTGATATTGGCATTCCTGCCAATAACAAGGGCAAAC
ACAGCATTGGGTGTCTCTTCTGGCTTTTGGCTAGAATGGTTCTCCAGATG
CGCGGCACTATTCGTCCTGGCCACAAGTGGGATGTGATGGTCGATCTGTT
CTTCTACAGGGAGCCAGAAGAAACAAGCAGGCTGAAGAAGAGAAACTGCT
GCTATTGATTATGCTACAGCAGAGTACAGCATGAATCTTATCAGTGGTGA
GCAATGGCTTCCCCAATTGCTGATGGTGGGTGGGCGGGTGGTGAATTTCT
AAAGCCATTCCTGTGGTCCTATTTC
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