EY702724

Overview
NameEY702724
Unique NameEY702724
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_ZYGRC (40S ribosomal protein S0 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 9.812e-61
Identity = 114/197 (57.87%), Postives = 144/197 (73.10%), Query Frame = 3
Query:  135 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYREPEE 722
            D Q++LAA  HLG +N     E YVFK R DG+ ++++GKTWEKL +AAR+I AI NP DI+  S+R +GQRAVLKF+ +T A  IAGR TPG+FTN +  SF EPRL+I+TDPR+D Q IKEA+  NIP IA  D DSP  YVD+ IP NN+GKHSIG +++LLAR VL++RG  +     W VM DL+FYR PEE
Sbjct:   13 DAQLLLAANTHLGARNVQVHQEPYVFKTRPDGVNVVDVGKTWEKLVLAARIIAAIPNPEDIVAISSRTFGQRAVLKFSAHTGATPIAGRFTPGSFTNYITRSFKEPRLIIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSVMPDLYFYRNPEE 209          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_CAEBR (40S ribosomal protein SA OS=Caenorhabditis briggsae GN=rps-0 PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.282e-60
Identity = 111/206 (53.88%), Postives = 153/206 (74.27%), Query Frame = 3
Query:  129 EADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI--RPGHKWD---VMVDLFFYREPEETSR 731
            E D+  +LA + HLG+ N +FQM++YV+KRR DG  IIN+ KTWEKL +AAR I A+ENP D++V SARPY QRA+LKFA +T A AI GR +PG  TNQ+Q +F EPRLL+++DPR DHQ + EA+   +P I+F +T+SP++ +DIG+P NNKG+ SIG ++W+LAR +L +RG I  + G   D   +M DL+FYR+P ET +
Sbjct:   12 EEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLAARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLDGKEIMPDLYFYRDPTETEK 217          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_ASHGO (40S ribosomal protein S0 OS=Ashbya gossypii GN=RPS0 PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.282e-60
Identity = 113/197 (57.36%), Postives = 147/197 (74.62%), Query Frame = 3
Query:  135 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYREPEE 722
            D Q++LAA VHLG+KN     E Y++K R DG+ II++GKTWEK+ +AAR+I AI N  D++  S+R YGQRAVLKF+ +T A AIAGR TPG+FTN +  SF EPRL+I+TDPR+D Q IKEA+  NIP IA  D +SP  YVD+ IP NN+GKHSIG +++LLAR VL++RG  +     W +M DL+FYR+PEE
Sbjct:   13 DAQLLLAANVHLGSKNVQVHQEPYLYKTRPDGVNIIHIGKTWEKIVLAARIIAAIPNAEDVVAISSRTYGQRAVLKFSAHTGATAIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLESPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYRDPEE 209          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_LEIIN (40S ribosomal protein SA OS=Leishmania infantum GN=LinJ36.5570 PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.674e-60
Identity = 112/216 (51.85%), Postives = 150/216 (69.44%), Query Frame = 3
Query:   90 TGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSRLK 737
            T   +  + L  KE+D Q +LA   H+GT+N    M++Y++ R  +G +II+L   WEKL +AARVI A+ENP D+ V S+R YG RA+ KF+++       GR  PGTFTNQ+Q  F +PR+L++TDPRTDHQ I+EA+L NIP IA CDTD+P+ YVDI IP NN+G  SIG ++WLLAR VL++RGTI     W+  VDLFFYR+P E +  K
Sbjct:    2 TAVESGSKVLRMKESDAQKLLAMRCHIGTRNQSSAMKKYIYGRTAEGSHIIDLHMMWEKLILAARVIAAVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQKKFVQPRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLLAREVLRLRGTIVRSVPWEEKVDLFFYRDPNEAAEEK 217          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_CAEEL (40S ribosomal protein SA OS=Caenorhabditis elegans GN=rps-0 PE=1 SV=3)

HSP 1 Score: 232.646 bits (592), Expect = 2.186e-60
Identity = 109/206 (52.91%), Postives = 152/206 (73.79%), Query Frame = 3
Query:  129 EADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKW-----DVMVDLFFYREPEETSR 731
            E D+  +LA + HLG+ N +FQM++YV+KRR DG  IIN+ KTWEKL +AAR I A+ENP D++V SARPY QRA+LKFA +T A AI GR +PG  TNQ+Q +F EPRLL+++DPR DHQ + EA+   +P I+F +T+SP++ +DIG+P NNKG+ SIG ++W+LAR +L +RG I     +     ++M DL+FYR+P ET +
Sbjct:   12 EEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLAARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLEGKEIMPDLYFYRDPTETEK 217          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA2_VANPO (40S ribosomal protein S0-B OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS0B PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.855e-60
Identity = 113/200 (56.50%), Postives = 143/200 (71.50%), Query Frame = 3
Query:  135 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYREPEETSR 731
            D Q++LAA  HLG +N     E YVF  R DG+ +IN+GKTWEK+ +AAR+I AI NP D+   S+R YGQRAVLKF+ +T A  IAGR TPG+FTN +  SF EPRL+I+TDPR+D Q IKEA+  NIP IA  D DSP  YVD+ IP NN+GKHSIG +++LLAR VL++RG  +     W +M DL+FYR PEE  +
Sbjct:   13 DAQLLLAANTHLGARNVQVHQEPYVFNTRPDGVNVINVGKTWEKIVLAARIIAAIPNPEDVCAISSRTYGQRAVLKFSAHTGATPIAGRFTPGSFTNYITRSFKEPRLIIVTDPRSDFQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLVWYLLAREVLRLRGALVDRTQPWAIMPDLYFYRNPEEVEQ 212          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA1_VANPO (40S ribosomal protein S0-A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS0A PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.855e-60
Identity = 113/200 (56.50%), Postives = 143/200 (71.50%), Query Frame = 3
Query:  135 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYREPEETSR 731
            D Q++LAA  HLG +N     E YVF  R DG+ +IN+GKTWEK+ +AAR+I AI NP D+   S+R YGQRAVLKF+ +T A  IAGR TPG+FTN +  SF EPRL+I+TDPR+D Q IKEA+  NIP IA  D DSP  YVD+ IP NN+GKHSIG +++LLAR VL++RG  +     W +M DL+FYR PEE  +
Sbjct:   13 DAQLLLAANTHLGARNVQVHQEPYVFNTRPDGVNVINVGKTWEKIVLAARIIAAIPNPEDVCAISSRTYGQRAVLKFSAHTGATPIAGRFTPGSFTNYITRSFKEPRLIIVTDPRSDFQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLVWYLLAREVLRLRGALVDRTQPWAIMPDLYFYRNPEEVEQ 212          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_LEIMA (40S ribosomal protein SA OS=Leishmania major GN=LmjF36.5010 PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 1.085e-59
Identity = 110/207 (53.14%), Postives = 147/207 (71.01%), Query Frame = 3
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSRLK 737
            L  KE+D Q +LA   H+GT+N    M++Y++ R  +G +II++   WEKL +AARVI A+ENP D+ V S+R YG RA+ KF+++       GR  PGTFTNQ+Q  F +PR+L++TDPRTDHQ I+EA+L NIP IA CDTD+P+ YVDI IP NN+G  SIG ++WLLAR VL++RGTI     W+  VDLFFYR+P E +  K
Sbjct:   11 LRMKESDAQKLLAMRCHIGTRNQSSAMKKYIYGRTAEGSHIIDVHMMWEKLILAARVIAAVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQKKFVQPRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLLAREVLRLRGTIVRSVPWEEKVDLFFYRDPNEAAEEK 217          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_LEIBR (40S ribosomal protein SA OS=Leishmania braziliensis GN=LbrM35_V2.5370 PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.417e-59
Identity = 110/216 (50.93%), Postives = 150/216 (69.44%), Query Frame = 3
Query:   90 TGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSRLK 737
            T   +  + L  KE+D Q +LA   H+GT+N    M++Y++ R  +G +II++   WEKL +AARVI A+ENP D+ V S+R YG RA+ KF+++       GR  PGTFTNQ+Q  F +PR+L++TDPRTDHQ I+EA+L NIP IA CDTD+P+ +VDI IP NN+G  SIG ++WLLAR VL++RGTI     W+  VDLFFYR+P E +  K
Sbjct:    2 TAVESGSKVLRMKESDAQKLLAMRCHIGTRNQSSAMKKYIYGRTAEGSHIIDVHMLWEKLILAARVIAAVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQKKFMQPRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLDFVDIAIPCNNRGIKSIGMMYWLLAREVLRLRGTIVRSVPWEEKVDLFFYRDPNEAAEEK 217          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_SCHJA (40S ribosomal protein SA OS=Schistosoma japonicum GN=SJCHGC06078 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.277e-56
Identity = 104/196 (53.06%), Postives = 135/196 (68.88%), Query Frame = 3
Query:  135 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEE 722
            D+++MLAA VH+G  N +FQM  YV  R  D  +II L KTWEK+ ++AR I AI+   D+    +RP+ QRAVLKFA YT A A+AGR TPG FTNQ Q+ F EPRLL+++DP +DHQ + EA+  N+P IA C+TDSP+  VDI IP NNK  HSI  ++W LAR V ++RG      +W V+ DLF YR+P E
Sbjct:   14 DLRLMLAAHVHVGETNMNFQMSTYVHGRTKDNFHIIKLDKTWEKILLSARAIAAIDTASDVFAIGSRPFSQRAVLKFANYTGATAMAGRFTPGAFTNQKQSCFREPRLLVVSDPLSDHQAVMEASSVNVPLIALCNTDSPLTRVDIVIPCNNKSTHSIAVVWWFLAREVRRIRGEDTRLQQWSVLPDLFLYRDPNE 209          
The following BLAST results are available for this feature:
BLAST of EY702724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
RSSA_ZYGRC9.812e-6157.8740S ribosomal protein S0 OS=Zygosaccharomyces roux... [more]
RSSA_CAEBR1.282e-6053.8840S ribosomal protein SA OS=Caenorhabditis briggsa... [more]
RSSA_ASHGO1.282e-6057.3640S ribosomal protein S0 OS=Ashbya gossypii GN=RPS... [more]
RSSA_LEIIN1.674e-6051.8540S ribosomal protein SA OS=Leishmania infantum GN... [more]
RSSA_CAEEL2.186e-6052.9140S ribosomal protein SA OS=Caenorhabditis elegans... [more]
RSSA2_VANPO2.855e-6056.5040S ribosomal protein S0-B OS=Vanderwaltozyma poly... [more]
RSSA1_VANPO2.855e-6056.5040S ribosomal protein S0-A OS=Vanderwaltozyma poly... [more]
RSSA_LEIMA1.085e-5953.1440S ribosomal protein SA OS=Leishmania major GN=Lm... [more]
RSSA_LEIBR1.417e-5950.9340S ribosomal protein SA OS=Leishmania braziliensi... [more]
RSSA_SCHJA7.277e-5653.0640S ribosomal protein SA OS=Schistosoma japonicum ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-E08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702724 ID=EY702724; Name=EY702724; organism=Citrus sinensis; type=EST; length=875bp
TTCCGTCGACCCACGCGTCCGAGCAGAAGTCTCCGTCGGTACCACGAGTC
TCAGCTTTCTCTCGCAGGTTTTGAGAAATAAAGATGGCGACCGGAACAGC
AACGGCCCCGAGGCAGCTCTCTCAGAAAGAGGCTGACATTCAGATGATGT
TAGCCGCCGAAGTTCATTTGGGTACTAAGAACTGTGACTTCCAAATGGAA
CGTTACGTGTTCAAGCGCCGAAACGATGGAATTTATATTATCAATCTTGG
CAAGACTTGGGAGAAGCTACAGATGGCGGCCAGGGTTATCGTAGCCATTG
AAAACCCTGGGGACATTATTGTCCAATCAGCTAGACCCTATGGACAGCGA
GCTGTGTTGAAGTTTGCAAAGTACACTCACGCCCATGCCATTGCTGGCAG
GCACACTCCTGGTACATTTACCAATCAAATGCAAACATCATTCAATGAGC
CCCGACTTCTCATTCTAACAGATCCACGAACAGACCATCAGCCAATTAAG
GAAGCTGCTCTTGGAAACATTCCCACCATTGCCTTTTGTGACACTGACTC
ACCTATGCGTTATGTTGATATTGGCATTCCTGCCAATAACAAGGGCAAAC
ACAGCATTGGGTGTCTCTTCTGGCTTTTGGCTAGAATGGTTCTCCAGATG
CGCGGCACTATTCGTCCTGGCCACAAGTGGGATGTGATGGTCGATCTGTT
CTTCTACAGGGAGCCAGAAGAAACAAGCAGGCTGAAGAAGAGAAACTGCT
GCTATTGATTATGCTACAGCAGAGTACAGCATGAATCTTATCAGTGGTGA
GCAATGGCTTCCCCAATTGCTGATGGTGGGTGGGCGGGTGGTGAATTTCT
AAAGCCATTCCTGTGGTCCTATTTC
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