EY702724

Overview
NameEY702724
Unique NameEY702724
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig423 contig Csv1_Contig423:1..875. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_DANRE (40S ribosomal protein SA OS=Danio rerio GN=rpsa PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 7.000e-75
Identity = 134/205 (65.37%), Postives = 160/205 (78.05%), Query Frame = 3 
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            L  KE D+   LAA  HLG  N DFQME+YV+KR++DG+YIINL KTWEKL +AAR IVAIENP D+ V S+R  GQRAVLKFA  T +   AGR TPGTFTNQ+Q +F EPRLLI+TDPR DHQP+ EA+  NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI   H W+VM DL+FYR+PEE  +
Sbjct:    8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYVYKRKSDGVYIINLKKTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASATGSTTFAGRFTPGTFTNQIQAAFREPRLLIVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGPHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEK 212
[Close]
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_CHICK (40S ribosomal protein SA OS=Gallus gallus GN=RPSA PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 7.000e-75
Identity = 134/205 (65.37%), Postives = 161/205 (78.54%), Query Frame = 3 
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            L  KE D+   LAA  HLG  N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R  GQRAVLKFA  T A  IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+  NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI   H W+VM DL+FYR+PEE  +
Sbjct:    8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEK 212
[Close]
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_XENTR (40S ribosomal protein SA OS=Xenopus tropicalis GN=rpsa PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.194e-74
Identity = 133/205 (64.88%), Postives = 161/205 (78.54%), Query Frame = 3 
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            L  KE D+   LAA  HLG  N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R  GQRAVLKFA  + A  IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+  NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI   H W+VM DL+FYR+PEE  +
Sbjct:    8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASASGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEK 212
[Close]
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_SHEEP (40S ribosomal protein SA OS=Ovis aries GN=RPSA PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.194e-74
Identity = 133/205 (64.88%), Postives = 161/205 (78.54%), Query Frame = 3 
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            L  KE D+   LAA  HLG  N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R  GQRAVLKFA  T A  IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+  N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI   H W+VM DL+FYR+PEE  +
Sbjct:    8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEK 212
[Close]
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_RAT (40S ribosomal protein SA OS=Rattus norvegicus GN=Rpsa PE=1 SV=3)

HSP 1 Score: 280.026 bits (715), Expect = 1.194e-74
Identity = 133/205 (64.88%), Postives = 161/205 (78.54%), Query Frame = 3 
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            L  KE D+   LAA  HLG  N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R  GQRAVLKFA  T A  IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+  N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI   H W+VM DL+FYR+PEE  +
Sbjct:    8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEK 212
[Close]
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_PIG (40S ribosomal protein SA OS=Sus scrofa GN=RPSA PE=1 SV=3)

HSP 1 Score: 280.026 bits (715), Expect = 1.194e-74
Identity = 133/205 (64.88%), Postives = 161/205 (78.54%), Query Frame = 3 
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            L  KE D+   LAA  HLG  N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R  GQRAVLKFA  T A  IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+  N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI   H W+VM DL+FYR+PEE  +
Sbjct:    8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEK 212
[Close]
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_MOUSE (40S ribosomal protein SA OS=Mus musculus GN=Rpsa PE=1 SV=4)

HSP 1 Score: 280.026 bits (715), Expect = 1.194e-74
Identity = 133/205 (64.88%), Postives = 161/205 (78.54%), Query Frame = 3 
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            L  KE D+   LAA  HLG  N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R  GQRAVLKFA  T A  IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+  N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI   H W+VM DL+FYR+PEE  +
Sbjct:    8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEK 212
[Close]
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_ICTPU (40S ribosomal protein SA OS=Ictalurus punctatus GN=rpsa PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.194e-74
Identity = 135/205 (65.85%), Postives = 159/205 (77.56%), Query Frame = 3 
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            L  KE D+   LAA  HLG  N DFQME+YV+KR++DGIYIINL KTWEKL +AAR IVAIENP D+ V S+R  GQRA LKFA  T A   AGR TPGTFTNQ+Q +F EPRLLI+TDPR DHQP+ EA+  NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI   H W+VM DL+FYR+PEE  +
Sbjct:    8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYVYKRKSDGIYIINLKKTWEKLLLAARAIVAIENPADVCVISSRNTGQRACLKFASGTGATTFAGRFTPGTFTNQIQAAFREPRLLIVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGPHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEK 212
[Close]
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_HUMAN (40S ribosomal protein SA OS=Homo sapiens GN=RPSA PE=1 SV=4)

HSP 1 Score: 280.026 bits (715), Expect = 1.194e-74
Identity = 133/205 (64.88%), Postives = 161/205 (78.54%), Query Frame = 3 
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            L  KE D+   LAA  HLG  N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R  GQRAVLKFA  T A  IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+  N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI   H W+VM DL+FYR+PEE  +
Sbjct:    8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEK 212
[Close]
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_DROWI (40S ribosomal protein SA OS=Drosophila willistoni GN=sta PE=3 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.194e-74
Identity = 136/205 (66.34%), Postives = 161/205 (78.54%), Query Frame = 3 
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            LS KE DI  ML A  HLG++N +FQME+YV+KRR DG+ IINLGKTWEKL +AAR IVAIEN  D+ V S+RP GQRAVLKFAKYT    IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+  NIP IAF +TDSP+RY+DI IP NNK  HSIG ++WLLAR VL++RGTI    +W V+VDLFFYR+PEE  +
Sbjct:    8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNIINLGKTWEKLVLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPMTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLLAREVLRLRGTISRSIEWPVVVDLFFYRDPEEAEK 212
The following BLAST results are available for this feature:
BLAST of EY702724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
RSSA_DANRE7.000e-7565.3740S ribosomal protein SA OS=Danio rerio GN=rpsa PE... [more]
RSSA_CHICK7.000e-7565.3740S ribosomal protein SA OS=Gallus gallus GN=RPSA ... [more]
RSSA_XENTR1.194e-7464.8840S ribosomal protein SA OS=Xenopus tropicalis GN=... [more]
RSSA_SHEEP1.194e-7464.8840S ribosomal protein SA OS=Ovis aries GN=RPSA PE=... [more]
RSSA_RAT1.194e-7464.8840S ribosomal protein SA OS=Rattus norvegicus GN=R... [more]
RSSA_PIG1.194e-7464.8840S ribosomal protein SA OS=Sus scrofa GN=RPSA PE=... [more]
RSSA_MOUSE1.194e-7464.8840S ribosomal protein SA OS=Mus musculus GN=Rpsa P... [more]
RSSA_ICTPU1.194e-7465.8540S ribosomal protein SA OS=Ictalurus punctatus GN... [more]
RSSA_HUMAN1.194e-7464.8840S ribosomal protein SA OS=Homo sapiens GN=RPSA P... [more]
RSSA_DROWI1.194e-7466.3440S ribosomal protein SA OS=Drosophila willistoni ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-E08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702724 ID=EY702724; Name=EY702724; organism=Citrus sinensis; type=EST; length=875bp
TTCCGTCGACCCACGCGTCCGAGCAGAAGTCTCCGTCGGTACCACGAGTC
TCAGCTTTCTCTCGCAGGTTTTGAGAAATAAAGATGGCGACCGGAACAGC
AACGGCCCCGAGGCAGCTCTCTCAGAAAGAGGCTGACATTCAGATGATGT
TAGCCGCCGAAGTTCATTTGGGTACTAAGAACTGTGACTTCCAAATGGAA
CGTTACGTGTTCAAGCGCCGAAACGATGGAATTTATATTATCAATCTTGG
CAAGACTTGGGAGAAGCTACAGATGGCGGCCAGGGTTATCGTAGCCATTG
AAAACCCTGGGGACATTATTGTCCAATCAGCTAGACCCTATGGACAGCGA
GCTGTGTTGAAGTTTGCAAAGTACACTCACGCCCATGCCATTGCTGGCAG
GCACACTCCTGGTACATTTACCAATCAAATGCAAACATCATTCAATGAGC
CCCGACTTCTCATTCTAACAGATCCACGAACAGACCATCAGCCAATTAAG
GAAGCTGCTCTTGGAAACATTCCCACCATTGCCTTTTGTGACACTGACTC
ACCTATGCGTTATGTTGATATTGGCATTCCTGCCAATAACAAGGGCAAAC
ACAGCATTGGGTGTCTCTTCTGGCTTTTGGCTAGAATGGTTCTCCAGATG
CGCGGCACTATTCGTCCTGGCCACAAGTGGGATGTGATGGTCGATCTGTT
CTTCTACAGGGAGCCAGAAGAAACAAGCAGGCTGAAGAAGAGAAACTGCT
GCTATTGATTATGCTACAGCAGAGTACAGCATGAATCTTATCAGTGGTGA
GCAATGGCTTCCCCAATTGCTGATGGTGGGTGGGCGGGTGGTGAATTTCT
AAAGCCATTCCTGTGGTCCTATTTC
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