EY702724

Overview
NameEY702724
Unique NameEY702724
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig423 contig Csv1_Contig423:1..875. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_CERAE (40S ribosomal protein SA OS=Cercopithecus aethiops GN=RPSA PE=2 SV=3)

HSP 1 Score: 280.026 bits (715), Expect = 1.194e-74
Identity = 133/205 (64.88%), Postives = 161/205 (78.54%), Query Frame = 3
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            L  KE D+   LAA  HLG  N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R  GQRAVLKFA  T A  IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+  N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI   H W+VM DL+FYR+PEE  +
Sbjct:    8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEK 212          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_BOVIN (40S ribosomal protein SA OS=Bos taurus GN=RPSA PE=2 SV=4)

HSP 1 Score: 280.026 bits (715), Expect = 1.194e-74
Identity = 133/205 (64.88%), Postives = 161/205 (78.54%), Query Frame = 3
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            L  KE D+   LAA  HLG  N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R  GQRAVLKFA  T A  IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+  N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI   H W+VM DL+FYR+PEE  +
Sbjct:    8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEK 212          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_SOLSE (40S ribosomal protein SA OS=Solea senegalensis GN=rpsa PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.660e-74
Identity = 133/205 (64.88%), Postives = 158/205 (77.07%), Query Frame = 3
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            L  KE D+   LAA  HLG  N DFQM+ YV+KR++DG+YIINL KTWEKL +AAR IVAIENP D+ V S+R  GQRAVLKFA  T A    GR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+  NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI   H WDVM DL+FYR+PEE  +
Sbjct:    8 LQMKEEDVLKFLAAGTHLGGTNLDFQMDHYVYKRKSDGVYIINLKKTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASATGATTFHGRFTPGTFTNQIQAAFREPRLLLVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLAREVLRMRGTISREHPWDVMPDLYFYRDPEEIEK 212          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_SPAAU (40S ribosomal protein SA OS=Sparus aurata GN=rpsa PE=2 SV=2)

HSP 1 Score: 278.485 bits (711), Expect = 3.474e-74
Identity = 133/205 (64.88%), Postives = 159/205 (77.56%), Query Frame = 3
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            L  KE D+   LAA  HLG  N DFQM++YV+KR++DG+YIINL KTWEKL +AAR IVAIENP D+ V S+R  GQRAVLKFA  T A    GR TPGTFTNQ+Q +F EPRLLI+TDPR DHQP+ EA+  NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI   H W+VM DL+FYR+PEE  +
Sbjct:    8 LQMKEEDVLKFLAAGTHLGGTNLDFQMDQYVYKRKSDGVYIINLKKTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASATGATTFHGRFTPGTFTNQIQAAFREPRLLIVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEK 212          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_POSPM (40S ribosomal protein S0 OS=Postia placenta (strain ATCC 44394 / Madison 698-R) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.925e-74
Identity = 131/209 (62.68%), Postives = 166/209 (79.43%), Query Frame = 3
Query:  108 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYREPEETSR 731
            P  LS  + +IQ++LAA+ H+G+KNCD QM  YV+KRR DGI+I+N+GKTWEKL  AAR+I AIENP D+ V SARPYG RAVLK+A  T A AIAGR TPG+FTN +  SF EPRL+++TDPR DHQ I+EA+  NIP IAFCDTD+P+++VD+ IP NNK +HSIG ++WLLAR VL++RGTI R    W+VMVD+FFYR+PEE  +
Sbjct:    6 PSVLSATDEEIQLLLAAQAHIGSKNCDKQMLPYVWKRRADGIHILNIGKTWEKLVFAARIIAAIENPNDVCVISARPYGHRAVLKYAANTGAQAIAGRFTPGSFTNYITRSFKEPRLIVVTDPRVDHQAIREASYVNIPVIAFCDTDAPLKFVDVAIPTNNKSRHSIGLMWWLLAREVLRLRGTIPRTTDGWNVMVDMFFYRDPEEVEK 214          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_CRIGR (40S ribosomal protein SA OS=Cricetulus griseus GN=Rpsa PE=1 SV=3)

HSP 1 Score: 277.715 bits (709), Expect = 5.925e-74
Identity = 132/205 (64.39%), Postives = 160/205 (78.05%), Query Frame = 3
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            L  KE D+   LAA  HLG  N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R  GQRAVLKFA  T A  IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+  N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR V +MRGTI   H W+VM DL+FYR+PEE  +
Sbjct:    8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVRRMRGTISREHPWEVMPDLYFYRDPEEIEK 212          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_SALSA (40S ribosomal protein SA OS=Salmo salar GN=rpsa PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.320e-73
Identity = 132/205 (64.39%), Postives = 157/205 (76.59%), Query Frame = 3
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            L  KE D+   LAA  HLG  N DFQME Y +KR++DG+YIINL KTWEKL +AAR IVAIENP D+ V S+R  GQRAVLKFA  T A    GR TPGTFTNQ+Q +F EPRLLI+TDPR DHQP+ EA+  NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+L+R VL+MRGTI   H W+VM DL+FYR+PEE  +
Sbjct:    8 LQMKEEDVLKFLAAGTHLGGTNMDFQMEHYTYKRKSDGVYIINLKKTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASATGATTFHGRFTPGTFTNQIQAAFREPRLLIVTDPRADHQPLTEASYVNIPTIAMCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLSREVLRMRGTISREHPWEVMPDLYFYRDPEEIEK 212          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_CRYNE (40S ribosomal protein S0 OS=Cryptococcus neoformans GN=RPS0 PE=3 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 3.841e-73
Identity = 132/212 (62.26%), Postives = 163/212 (76.89%), Query Frame = 3
Query:  108 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPG----HKWDVMVDLFFYREPEETSR 731
            P+ L   E DIQ++LAA+ HLGTKNCD  ME YV+KRR DGI++IN+GKTWEKL +AARV+  IENP D+ V SARPYG RAVLK+  +T A AIAGR TPG+FTN +  SF EPR++I+TDPR DHQ I+EAA  NIP IAFCDTD+  ++VDI IPANNK +HSIG +++LL R VL++RGT+  G      WDV+ DLFFYR+PEE  R
Sbjct:    7 PKALQATEDDIQLLLAAQCHLGTKNCDKSMENYVWKRRADGIHVINVGKTWEKLVLAARVLATIENPNDVCVISARPYGHRAVLKYGSFTGAQAIAGRFTPGSFTNYITRSFKEPRVIIVTDPRVDHQAIREAAYVNIPVIAFCDTDASTKFVDIAIPANNKSRHSIGLMWYLLCREVLRLRGTVPRGPTGPSGWDVLPDLFFYRDPEEIER 218          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_URECA (40S ribosomal protein SA OS=Urechis caupo PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 5.016e-73
Identity = 133/205 (64.88%), Postives = 158/205 (77.07%), Query Frame = 3
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            L+ KE D+   LA   HLG  N DFQME+YV+KRR DG  IIN+ KTWEK+ +AAR I AIENP DI V SARPYGQRAVLKFA YT A  IAGR TPGTFTNQ+QT+F EPRLL++TDP TDHQP+ EA+  NIP IA  +TDSP++YVDI IP NNK  HS+G ++W+LAR VL++RGTI     W+VMVDLFFYR+PEE  +
Sbjct:    8 LALKEEDVTKFLACASHLGANNVDFQMEQYVYKRRPDGTSIINVRKTWEKVLLAARAIAAIENPADICVISARPYGQRAVLKFAHYTGATPIAGRFTPGTFTNQIQTAFREPRLLVVTDPYTDHQPVTEASYVNIPVIALTNTDSPLKYVDIAIPCNNKSIHSVGLMWWMLAREVLRLRGTISREVPWEVMVDLFFYRDPEEAEK 212          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_TRIGR (40S ribosomal protein SA OS=Tripneustes gratilla PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.117e-72
Identity = 126/205 (61.46%), Postives = 162/205 (79.02%), Query Frame = 3
Query:  117 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            L+ KE D+Q  LA+  H+G+ N D+QM +YV+KR+ DG YIINL +TWEKL MAAR+IVAIENP D+ V S+RPYGQRAVLKF  +T A  IAGR+TPGTFTNQ+Q +F EPR+LI+TDPR+DHQP+ EA+  NIP IA C+TDSP+RYVDI IP NNK  HSIG ++W+L+R VL++RG I     W++M DL+F+R+PEE  +
Sbjct:    8 LALKEDDVQKFLASGAHIGSSNLDYQMTQYVYKRKPDGTYIINLRRTWEKLLMAARIIVAIENPADVCVISSRPYGQRAVLKFGAHTGATPIAGRYTPGTFTNQIQAAFREPRILIVTDPRSDHQPVTEASYVNIPVIALCNTDSPLRYVDIAIPCNNKSIHSIGLMWWMLSREVLRLRGAISRDVTWEIMCDLYFFRDPEEAEK 212          
The following BLAST results are available for this feature:
BLAST of EY702724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
RSSA_CERAE1.194e-7464.8840S ribosomal protein SA OS=Cercopithecus aethiops... [more]
RSSA_BOVIN1.194e-7464.8840S ribosomal protein SA OS=Bos taurus GN=RPSA PE=... [more]
RSSA_SOLSE2.660e-7464.8840S ribosomal protein SA OS=Solea senegalensis GN=... [more]
RSSA_SPAAU3.474e-7464.8840S ribosomal protein SA OS=Sparus aurata GN=rpsa ... [more]
RSSA_POSPM5.925e-7462.6840S ribosomal protein S0 OS=Postia placenta (strai... [more]
RSSA_CRIGR5.925e-7464.3940S ribosomal protein SA OS=Cricetulus griseus GN=... [more]
RSSA_SALSA1.320e-7364.3940S ribosomal protein SA OS=Salmo salar GN=rpsa PE... [more]
RSSA_CRYNE3.841e-7362.2640S ribosomal protein S0 OS=Cryptococcus neoforman... [more]
RSSA_URECA5.016e-7364.8840S ribosomal protein SA OS=Urechis caupo PE=2 SV=... [more]
RSSA_TRIGR1.117e-7261.4640S ribosomal protein SA OS=Tripneustes gratilla P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-E08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702724 ID=EY702724; Name=EY702724; organism=Citrus sinensis; type=EST; length=875bp
TTCCGTCGACCCACGCGTCCGAGCAGAAGTCTCCGTCGGTACCACGAGTC
TCAGCTTTCTCTCGCAGGTTTTGAGAAATAAAGATGGCGACCGGAACAGC
AACGGCCCCGAGGCAGCTCTCTCAGAAAGAGGCTGACATTCAGATGATGT
TAGCCGCCGAAGTTCATTTGGGTACTAAGAACTGTGACTTCCAAATGGAA
CGTTACGTGTTCAAGCGCCGAAACGATGGAATTTATATTATCAATCTTGG
CAAGACTTGGGAGAAGCTACAGATGGCGGCCAGGGTTATCGTAGCCATTG
AAAACCCTGGGGACATTATTGTCCAATCAGCTAGACCCTATGGACAGCGA
GCTGTGTTGAAGTTTGCAAAGTACACTCACGCCCATGCCATTGCTGGCAG
GCACACTCCTGGTACATTTACCAATCAAATGCAAACATCATTCAATGAGC
CCCGACTTCTCATTCTAACAGATCCACGAACAGACCATCAGCCAATTAAG
GAAGCTGCTCTTGGAAACATTCCCACCATTGCCTTTTGTGACACTGACTC
ACCTATGCGTTATGTTGATATTGGCATTCCTGCCAATAACAAGGGCAAAC
ACAGCATTGGGTGTCTCTTCTGGCTTTTGGCTAGAATGGTTCTCCAGATG
CGCGGCACTATTCGTCCTGGCCACAAGTGGGATGTGATGGTCGATCTGTT
CTTCTACAGGGAGCCAGAAGAAACAAGCAGGCTGAAGAAGAGAAACTGCT
GCTATTGATTATGCTACAGCAGAGTACAGCATGAATCTTATCAGTGGTGA
GCAATGGCTTCCCCAATTGCTGATGGTGGGTGGGCGGGTGGTGAATTTCT
AAAGCCATTCCTGTGGTCCTATTTC
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