EY702724

Overview
NameEY702724
Unique NameEY702724
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig423 contig Csv1_Contig423:1..875. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_ASPCL (40S ribosomal protein S0 OS=Aspergillus clavatus GN=rps0 PE=3 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 3.365e-69
Identity = 126/205 (61.46%), Postives = 158/205 (77.07%), Query Frame = 3
Query:  108 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYREPE 719
            P   +    DI+M+LAA+ HLG+KN    ME Y++K R DG+ +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKEA+  NIP IA CDTDSP  +VD+ IP NNKG+H+IG ++WLLAR VL++RGT+     +WDV+VDL+FYR+PE
Sbjct:    7 PPMFNPTPQDIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGVNVINIGKTWEKILLAARIIAAIDNPADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLVWWLLAREVLRLRGTLANRETEWDVVVDLYFYRDPE 211          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_CHAGB (40S ribosomal protein S0 OS=Chaetomium globosum GN=RPS0 PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 4.394e-69
Identity = 126/214 (58.88%), Postives = 159/214 (74.30%), Query Frame = 3
Query:   99 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYREPEETSRLK 737
            A  P   +    DI+ +LAA+ H+G+KN    M+ Y++K R DG+ +IN+GKTWEK+ +AAR+I AI+NP D+ V SARPYGQRAVLKFA +T A AIAGR TPG+FTN +  SF EPRL+I+TDPRTD Q IKEA+  NIP IA CDTDSP  YVD+ IP NNKG+HSIG ++W+LAR VL++RGTI      WDVM DL+FYR+PE  +  K
Sbjct:    4 ANLPSIFNATSTDIEQLLAAQCHVGSKNLGVNMQPYLWKTRADGVNVINIGKTWEKITLAARIIAAIDNPSDVCVISARPYGQRAVLKFAAHTGAQAIAGRFTPGSFTNYITRSFKEPRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPTEYVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGTIYNRETPWDVMPDLYFYRDPEAEAEEK 217          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_PYRTR (40S ribosomal protein S0 OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=rps0 PE=3 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.739e-69
Identity = 125/205 (60.98%), Postives = 157/205 (76.59%), Query Frame = 3
Query:  108 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYREPE 719
            P   +  + DI+M+LAA+ HLG KN    ME Y++K R DG+ ++N+GKTWEK+ +AAR+IVAI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKEA+  NIP IA CD DSP  YVD+ IP NNKG+H+IG ++W+LAR VL++RGT+     +WDVM DL+FYR+PE
Sbjct:    7 PAIFNPTQQDIEMLLAAQCHLGAKNLQVHMEPYLWKTRPDGVNVLNIGKTWEKIVLAARIIVAIDNPADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFREPRLVIVTDPRTDAQAIKEASYVNIPVIALCDGDSPTEYVDVAIPTNNKGRHAIGLVWWMLAREVLRLRGTLANRETEWDVMTDLYFYRDPE 211          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_ASPNC (40S ribosomal protein S0 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=rps0 PE=3 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.739e-69
Identity = 129/210 (61.43%), Postives = 160/210 (76.19%), Query Frame = 3
Query:  105 APRQL----SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYREPE 719
            AP QL    +    DI+M+LAA+ HLG+KN    ME Y++K R DG+ +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKEA+  NIP IA CDTDSP  +VD+ IP NNKG+H+IG ++WLLAR VL++RGT+      WDV+VDL+FYR+PE
Sbjct:    2 APSQLPPIFNPTSQDIEMLLAAQCHLGSKNLQSHMEPYLWKTRPDGVNVINIGKTWEKILLAARIIAAIDNPADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLVWWLLAREVLRLRGTLASREVDWDVVVDLYFYRDPE 211          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_PODAN (40S ribosomal protein S0 OS=Podospora anserina GN=RPS0 PE=3 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 7.496e-69
Identity = 126/214 (58.88%), Postives = 159/214 (74.30%), Query Frame = 3
Query:   99 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYREPEETSRLK 737
            A  P   +    DI+ +LAA+ H+G+KN     + Y++K R DG+ IIN+GKTWEK+ +AAR+I AI+NP D+ V SARPYGQRAVLKFA +T A AIAGR TPG+FTN +  SF EPRL+++TDPRTD Q IKEA+  NIP IA CDTDSP  YVD+ IP NNKG+HSIG ++W+LAR VL++RGTI      WDVMVDL+FYR+PE  +  K
Sbjct:    4 ANLPSIFNATSQDIEQLLAAQCHIGSKNLGVHAQPYLWKTRADGVNIINIGKTWEKIVLAARIIAAIDNPSDVCVISARPYGQRAVLKFAAHTGAQAIAGRFTPGSFTNYITRSFKEPRLIVVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEYVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGTIYNREAPWDVMVDLYFYRDPEAEAEEK 217          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_PLAKH (40S ribosomal protein SA OS=Plasmodium knowlesi (strain H) GN=PKH_061110 PE=3 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 7.496e-69
Identity = 123/208 (59.13%), Postives = 159/208 (76.44%), Query Frame = 3
Query:   99 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEE 722
            +T  +  S KE  I  ML  +VH+GTKN + +M+RYV+ R  DG++I+NL KT+EKLQ+AAR+IVAI NP D++V SARP+G RAVLKFA+YT A AIAGR TPG  TNQ+   F EPRLLI+TDPRTD QP+KE+A  NIP IA CD+DSP+ +VDI IP NNKGK SI  ++WLLA+ VL ++GT+     W+VMVD+F +R+PE+
Sbjct:    2 STNKKVQSPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHILNLAKTYEKLQLAARIIVAINNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFTEPRLLIVTDPRTDAQPVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGTLPRSKPWNVMVDMFLWRDPEQ 209          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_MALGO (40S ribosomal protein S0 OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 7.496e-69
Identity = 126/209 (60.29%), Postives = 158/209 (75.60%), Query Frame = 3
Query:  108 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYREPEETSR 731
            P  L+    DI ++LAA+ H+GTKNC+  M  YV KRR DGI++IN+GKTWEKL  AARV+ A+ENP DI V S+R YG RAV KFA  T A AIAGR TPG+FTN +  SF EPR++++TDPR DHQ I+E+A  NIP IA CDTD+P+R+VDI IP NNKG+HSIG L+WLL R  L++RG + R  + W+VMVD+FFYR+PEE  R
Sbjct:    6 PAILNPTPEDISLLLAAQTHIGTKNCEKAMLPYVHKRRADGIHLINIGKTWEKLVFAARVLAAVENPADICVISSRTYGHRAVHKFAANTGATAIAGRFTPGSFTNYITRSFKEPRVIVVTDPRVDHQAIRESAYVNIPVIALCDTDAPLRHVDIAIPGNNKGRHSIGLLWWLLCREFLRLRGIVPRTPNGWNVMVDMFFYRDPEEIER 214          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_SCLS1 (40S ribosomal protein S0 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=rps0 PE=3 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 9.790e-69
Identity = 129/210 (61.43%), Postives = 159/210 (75.71%), Query Frame = 3
Query:  105 APRQL----SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYREPE 719
            AP QL    +    DI+ +LAA+ HLG+KN    ME Y++K R DGI +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKEA+  NIP IA CDTDSP  +VD+ IP NNKG+HSIG ++W+LAR VL++RG+I     +WD MVDL+FYR+PE
Sbjct:    2 APSQLPAIFNPTSQDIEQLLAAQCHLGSKNLQVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGSIASREAEWDTMVDLYFYRDPE 211          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_EMENI (40S ribosomal protein S0 OS=Emericella nidulans GN=rps0 PE=3 SV=2)

HSP 1 Score: 260.381 bits (664), Expect = 9.790e-69
Identity = 128/210 (60.95%), Postives = 160/210 (76.19%), Query Frame = 3
Query:  105 APRQL----SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYREPE 719
            AP QL    +    DI+M+LAA+ HLG+KN    ME Y++K R DG+ +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+++TDPRTD Q IKEA+  NIP IA CDTDSP  +VD+ IP NNKG+H+IG ++WLLAR VL++RGT+      WDV+VDL+FYR+PE
Sbjct:    2 APSQLPPIFNPTPQDIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGVNVINVGKTWEKILLAARIIAAIDNPADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFKEPRLIVVTDPRTDAQAIKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLIWWLLAREVLRLRGTLANREVDWDVVVDLYFYRDPE 211          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_PLAYO (40S ribosomal protein SA OS=Plasmodium yoelii yoelii GN=PY06059 PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.279e-68
Identity = 124/201 (61.69%), Postives = 155/201 (77.11%), Query Frame = 3
Query:  120 SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEE 722
            S KE  I  ML  +VH+GTKN + +M+RYV+ R  DG++IINL KT+EKLQ+AARVIVA+ NP D++V SARP+G RAVLKFA+YT A AIAGR TPG  TNQ+   F EPRLLI+TDPRTD Q +KE+A  NIP IA CD+DSP+ +VDI IP NNKGK SI  ++WLLA+ VL ++GTI     WDVMVD+F +R+PE+
Sbjct:    8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARVIVAVSNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFIEPRLLIVTDPRTDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGTIPRSQAWDVMVDMFLWRDPEQ 208          
The following BLAST results are available for this feature:
BLAST of EY702724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
RSSA_ASPCL3.365e-6961.4640S ribosomal protein S0 OS=Aspergillus clavatus G... [more]
RSSA_CHAGB4.394e-6958.8840S ribosomal protein S0 OS=Chaetomium globosum GN... [more]
RSSA_PYRTR5.739e-6960.9840S ribosomal protein S0 OS=Pyrenophora tritici-re... [more]
RSSA_ASPNC5.739e-6961.4340S ribosomal protein S0 OS=Aspergillus niger (str... [more]
RSSA_PODAN7.496e-6958.8840S ribosomal protein S0 OS=Podospora anserina GN=... [more]
RSSA_PLAKH7.496e-6959.1340S ribosomal protein SA OS=Plasmodium knowlesi (s... [more]
RSSA_MALGO7.496e-6960.2940S ribosomal protein S0 OS=Malassezia globosa (st... [more]
RSSA_SCLS19.790e-6961.4340S ribosomal protein S0 OS=Sclerotinia sclerotior... [more]
RSSA_EMENI9.790e-6960.9540S ribosomal protein S0 OS=Emericella nidulans GN... [more]
RSSA_PLAYO1.279e-6861.6940S ribosomal protein SA OS=Plasmodium yoelii yoel... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-E08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702724 ID=EY702724; Name=EY702724; organism=Citrus sinensis; type=EST; length=875bp
TTCCGTCGACCCACGCGTCCGAGCAGAAGTCTCCGTCGGTACCACGAGTC
TCAGCTTTCTCTCGCAGGTTTTGAGAAATAAAGATGGCGACCGGAACAGC
AACGGCCCCGAGGCAGCTCTCTCAGAAAGAGGCTGACATTCAGATGATGT
TAGCCGCCGAAGTTCATTTGGGTACTAAGAACTGTGACTTCCAAATGGAA
CGTTACGTGTTCAAGCGCCGAAACGATGGAATTTATATTATCAATCTTGG
CAAGACTTGGGAGAAGCTACAGATGGCGGCCAGGGTTATCGTAGCCATTG
AAAACCCTGGGGACATTATTGTCCAATCAGCTAGACCCTATGGACAGCGA
GCTGTGTTGAAGTTTGCAAAGTACACTCACGCCCATGCCATTGCTGGCAG
GCACACTCCTGGTACATTTACCAATCAAATGCAAACATCATTCAATGAGC
CCCGACTTCTCATTCTAACAGATCCACGAACAGACCATCAGCCAATTAAG
GAAGCTGCTCTTGGAAACATTCCCACCATTGCCTTTTGTGACACTGACTC
ACCTATGCGTTATGTTGATATTGGCATTCCTGCCAATAACAAGGGCAAAC
ACAGCATTGGGTGTCTCTTCTGGCTTTTGGCTAGAATGGTTCTCCAGATG
CGCGGCACTATTCGTCCTGGCCACAAGTGGGATGTGATGGTCGATCTGTT
CTTCTACAGGGAGCCAGAAGAAACAAGCAGGCTGAAGAAGAGAAACTGCT
GCTATTGATTATGCTACAGCAGAGTACAGCATGAATCTTATCAGTGGTGA
GCAATGGCTTCCCCAATTGCTGATGGTGGGTGGGCGGGTGGTGAATTTCT
AAAGCCATTCCTGTGGTCCTATTTC
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