EY702724

Overview
NameEY702724
Unique NameEY702724
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig423 contig Csv1_Contig423:1..875. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_BOTFB (40S ribosomal protein S0 OS=Botryotinia fuckeliana (strain B05.10) GN=rps0 PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.279e-68
Identity = 129/210 (61.43%), Postives = 158/210 (75.24%), Query Frame = 3
Query:  105 APRQL----SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYREPE 719
            AP QL    +    DI+ +LAA+ HLG KN    ME Y++K R DGI +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKEA+  NIP IA CDTDSP  +VD+ IP NNKG+HSIG ++W+LAR VL++RG+I     +WD MVDL+FYR+PE
Sbjct:    2 APSQLPAIFNPTSQDIEQLLAAQCHLGAKNLQVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGSIASREAEWDTMVDLYFYRDPE 211          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_PLAVI (40S ribosomal protein SA OS=Plasmodium vivax GN=PVX_111380 PE=3 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.670e-68
Identity = 122/201 (60.70%), Postives = 155/201 (77.11%), Query Frame = 3
Query:  120 SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEE 722
            S KE  I  ML  +VH+GTKN + +M+RYV+ R  DG++I+NL KT+EKLQ+AAR+IVAI NP D++V SARP+G RAVLKFA+YT A AIAGR TPG  TNQ+   F EPRLLI+TDPRTD QP+KE+A  NIP IA CD+DSP+ +VDI IP NNKGK SI  ++WLLA+ VL ++GT+     W VMVD+F +R+PE+
Sbjct:    8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHILNLAKTYEKLQLAARIIVAINNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFTEPRLLIVTDPRTDAQPVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGTLPRSKPWKVMVDMFLWRDPEQ 208          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_ASPOR (40S ribosomal protein S0 OS=Aspergillus oryzae GN=rps0 PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.181e-68
Identity = 126/210 (60.00%), Postives = 160/210 (76.19%), Query Frame = 3
Query:  105 APRQL----SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYREPE 719
            AP QL    +  + DI+ +LAA+ HLG+KN    ME Y++K R DG+ +IN+GKTWEK+ +AAR+I A+ENP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKEA+  NIP +A CDTDSP  +VD+ IP NNKG+HSIG ++W+LAR VL++RGT+     +WDV+ DL+FYR+PE
Sbjct:    2 APSQLPPIFNPTQQDIEQLLAAQCHLGSKNLQVHMEPYLWKTRPDGVNVINIGKTWEKILLAARIIAAVENPADICVISARPYGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDSQAIKEASYVNIPVLALCDTDSPTDFVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGTLATRETEWDVVPDLYFYRDPE 211          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_ASPFN (40S ribosomal protein S0 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=rps0 PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.181e-68
Identity = 126/210 (60.00%), Postives = 160/210 (76.19%), Query Frame = 3
Query:  105 APRQL----SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYREPE 719
            AP QL    +  + DI+ +LAA+ HLG+KN    ME Y++K R DG+ +IN+GKTWEK+ +AAR+I A+ENP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKEA+  NIP +A CDTDSP  +VD+ IP NNKG+HSIG ++W+LAR VL++RGT+     +WDV+ DL+FYR+PE
Sbjct:    2 APSQLPPIFNPTQQDIEQLLAAQCHLGSKNLQVHMEPYLWKTRPDGVNVINIGKTWEKILLAARIIAAVENPADICVISARPYGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDSQAIKEASYVNIPVLALCDTDSPTDFVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGTLATRETEWDVVPDLYFYRDPE 211          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_PLACH (40S ribosomal protein SA OS=Plasmodium chabaudi GN=PC000391.02.0 PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.720e-68
Identity = 123/201 (61.19%), Postives = 155/201 (77.11%), Query Frame = 3
Query:  120 SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEE 722
            S KE  I  ML  +VH+GTKN + +M+RYV+ R  DG++IINL KT+EKLQ+AARVIVA+ NP D++V SARP+G RAVLKFA+YT A AIAGR TPG  TNQ+   F EPRLLI+TDPRTD Q +KE+A  NIP IA CD+DSP+ +VDI IP NNKGK SI  ++WLLA+ VL ++G+I     WDVMVD+F +R+PE+
Sbjct:    8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARVIVAVSNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFIEPRLLIVTDPRTDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGSIPRSQAWDVMVDMFLWRDPEQ 208          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_PLABA (40S ribosomal protein SA OS=Plasmodium berghei (strain Anka) GN=PB000415.00.0 PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.720e-68
Identity = 123/201 (61.19%), Postives = 155/201 (77.11%), Query Frame = 3
Query:  120 SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEE 722
            S KE  I  ML  +VH+GTKN + +M+RYV+ R  DG++IINL KT+EKLQ+AARVIVA+ NP D++V SARP+G RAVLKFA+YT A AIAGR TPG  TNQ+   F EPRLLI+TDPRTD Q +KE+A  NIP IA CD+DSP+ +VDI IP NNKGK SI  ++WLLA+ VL ++G+I     WDVMVD+F +R+PE+
Sbjct:    8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARVIVAVSNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFIEPRLLIVTDPRTDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGSIPRSQAWDVMVDMFLWRDPEQ 208          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_PENCW (40S ribosomal protein S0 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=rps0 PE=3 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 4.859e-68
Identity = 125/210 (59.52%), Postives = 160/210 (76.19%), Query Frame = 3
Query:  105 APRQL----SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYREPE 719
            AP QL    +    DI+M+LAA+ HLG+KN    ME Y++K R DG+ ++N+GKTWEK+ +AAR+I AI+NP D+ V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKEA+  NIP IA CDTDSP  +VD+ IP NNKG+H+IG ++W+LAR VL++RGT+     +WD +VDL+FYR+PE
Sbjct:    2 APSQLPPVFNPTAQDIEMLLAAQCHLGSKNLQVHMEPYLWKLRADGVNVLNIGKTWEKIVLAARIIAAIDNPADVCVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLVWWMLAREVLRLRGTLATRETEWDTVVDLYFYRDPE 211          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_PLAF7 (40S ribosomal protein SA OS=Plasmodium falciparum (isolate 3D7) GN=PF10_0264 PE=3 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 8.287e-68
Identity = 122/201 (60.70%), Postives = 154/201 (76.62%), Query Frame = 3
Query:  120 SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEE 722
            S KE  I  ML  +VH+GTKN + +M+RYV+ R  DG++IINL KT+EKLQ+AAR+IVAI NP D++V SARP+G RAVLKFA+YT A AIAGR TPG  TNQ+   F EPRLLI+TDPRTD Q +KE+A  NIP IA CD+DSP+ +VDI IP NNKGK SI  ++WLLA+ VL ++G I     W+VMVD+F +R+PE+
Sbjct:    8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARIIVAISNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFTEPRLLIVTDPRTDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGVIPRSEPWNVMVDMFLWRDPEQ 208          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA_NANOT (40S ribosomal protein S0 OS=Nannizzia otae (strain CBS 113480) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.082e-67
Identity = 122/205 (59.51%), Postives = 160/205 (78.05%), Query Frame = 3
Query:  135 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYREP--EETSRLKK 740
            D++MML A+ HLG+KN    ME Y++K R DG+ +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG+FTN +  SF EPRL+++TDPRTD Q IKEA+  NIP IA CD DSP  +VD+ IP NNKG+H+IG ++W+LAR VL++RGT+     +WD++VDL+FYR+P  EET  +++
Sbjct:   16 DMEMMLTAQCHLGSKNMQTHMEPYLWKTRPDGVNVINIGKTWEKIVLAARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGSFTNYITRSFKEPRLIVVTDPRTDAQAIKEASYVNIPVIALCDADSPTEFVDVAIPTNNKGRHAIGLVWWMLAREVLRLRGTLASRETEWDIVVDLYFYRDPEAEETKEIEE 220          
BLAST of EY702724 vs. ExPASy Swiss-Prot
Match: RSSA1_SCHPO (40S ribosomal protein S0-A OS=Schizosaccharomyces pombe GN=rps0a PE=1 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.414e-67
Identity = 122/208 (58.65%), Postives = 157/208 (75.48%), Query Frame = 3
Query:  108 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETSR 731
            P  L+  + DI+ +LAA  H+G+KN + +M+ YV+KRR+DG++I+NLGKTWEKL +AARVI  IENP D+ V S R YG RAVLKFA +T A AIAGR TPG FTN +  ++ EPRL+++TDPR D Q IKEA+  NIP IA CDTDS + +VDI IP NNKG+ SIG +++LLAR VL++RGT+     WDVM DL+FYR+PEE  R
Sbjct:    7 PNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAARVIATIENPADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIVVTDPRADAQAIKEASFVNIPVIALCDTDSILNHVDIAIPTNNKGRKSIGLIWYLLAREVLRVRGTLSRSAPWDVMPDLYFYRDPEEVER 214          
The following BLAST results are available for this feature:
BLAST of EY702724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
RSSA_BOTFB1.279e-6861.4340S ribosomal protein S0 OS=Botryotinia fuckeliana... [more]
RSSA_PLAVI1.670e-6860.7040S ribosomal protein SA OS=Plasmodium vivax GN=PV... [more]
RSSA_ASPOR2.181e-6860.0040S ribosomal protein S0 OS=Aspergillus oryzae GN=... [more]
RSSA_ASPFN2.181e-6860.0040S ribosomal protein S0 OS=Aspergillus flavus (st... [more]
RSSA_PLACH3.720e-6861.1940S ribosomal protein SA OS=Plasmodium chabaudi GN... [more]
RSSA_PLABA3.720e-6861.1940S ribosomal protein SA OS=Plasmodium berghei (st... [more]
RSSA_PENCW4.859e-6859.5240S ribosomal protein S0 OS=Penicillium chrysogenu... [more]
RSSA_PLAF78.287e-6860.7040S ribosomal protein SA OS=Plasmodium falciparum ... [more]
RSSA_NANOT1.082e-6759.5140S ribosomal protein S0 OS=Nannizzia otae (strain... [more]
RSSA1_SCHPO1.414e-6758.6540S ribosomal protein S0-A OS=Schizosaccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-E08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702724 ID=EY702724; Name=EY702724; organism=Citrus sinensis; type=EST; length=875bp
TTCCGTCGACCCACGCGTCCGAGCAGAAGTCTCCGTCGGTACCACGAGTC
TCAGCTTTCTCTCGCAGGTTTTGAGAAATAAAGATGGCGACCGGAACAGC
AACGGCCCCGAGGCAGCTCTCTCAGAAAGAGGCTGACATTCAGATGATGT
TAGCCGCCGAAGTTCATTTGGGTACTAAGAACTGTGACTTCCAAATGGAA
CGTTACGTGTTCAAGCGCCGAAACGATGGAATTTATATTATCAATCTTGG
CAAGACTTGGGAGAAGCTACAGATGGCGGCCAGGGTTATCGTAGCCATTG
AAAACCCTGGGGACATTATTGTCCAATCAGCTAGACCCTATGGACAGCGA
GCTGTGTTGAAGTTTGCAAAGTACACTCACGCCCATGCCATTGCTGGCAG
GCACACTCCTGGTACATTTACCAATCAAATGCAAACATCATTCAATGAGC
CCCGACTTCTCATTCTAACAGATCCACGAACAGACCATCAGCCAATTAAG
GAAGCTGCTCTTGGAAACATTCCCACCATTGCCTTTTGTGACACTGACTC
ACCTATGCGTTATGTTGATATTGGCATTCCTGCCAATAACAAGGGCAAAC
ACAGCATTGGGTGTCTCTTCTGGCTTTTGGCTAGAATGGTTCTCCAGATG
CGCGGCACTATTCGTCCTGGCCACAAGTGGGATGTGATGGTCGATCTGTT
CTTCTACAGGGAGCCAGAAGAAACAAGCAGGCTGAAGAAGAGAAACTGCT
GCTATTGATTATGCTACAGCAGAGTACAGCATGAATCTTATCAGTGGTGA
GCAATGGCTTCCCCAATTGCTGATGGTGGGTGGGCGGGTGGTGAATTTCT
AAAGCCATTCCTGTGGTCCTATTTC
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