EY702711
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: MFD_RICCN (Transcription-repair-coupling factor OS=Rickettsia conorii GN=mfd PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.728e-18 Identity = 33/94 (35.11%), Postives = 58/94 (61.70%), Query Frame = 3 Query: 93 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQR 374 Q A +VPT +L +QH+ ++ + I L+ K++++IR +L++G I ++IGTHSL+ + ++F L+L I+DE+Q FGV Q+ Sbjct: 633 QVAVVVPTTILCSQHFSRFIERFKGFGLN-----IKQLSSVISSKEAKIIRSELESGKINIIIGTHSLLHKNIKFFNLKLLIIDEEQHFGVGQK 721 HSP 2 Score: 45.4394 bits (106), Expect = 4.728e-18 Identity = 33/92 (35.87%), Postives = 49/92 (53.26%), Query Frame = 2 Query: 449 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY--KMMLDELQSGGKVYLVYPVIEQSEQL-PQLRAAASDL 715 HVLAMSATPIPRTL +++ G L+ I P R+ + T ++ Y+ V +L E GG+ + V P I+ E + QL+ +L Sbjct: 732 HVLAMSATPIPRTLQMSMTGLKELSIIATPPLNRLEVHTSVMP-----YDPVIIRDALLREHFRGGRSFYVVPRIKDIEDIAKQLKQIVPEL 818
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: MFD_BUCAI (Transcription-repair-coupling factor OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=mfd PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 8.042e-18 Identity = 34/91 (37.36%), Postives = 52/91 (57.14%), Query Frame = 3 Query: 93 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGV 365 Q A +VPT LLA QHY++ N + I +L+ K+ +I K + G I ++IGTH L+ + +E+ +L L I+DE+ RFGV Sbjct: 316 QVAILVPTTLLAQQHYKNFKIRFSNWPVN-----INILSRFQTQKEQDLIFKHTKNGRINIIIGTHKLLFKNIEWCSLGLLIIDEEHRFGV 401 HSP 2 Score: 50.0618 bits (118), Expect = 8.042e-18 Identity = 28/73 (38.36%), Postives = 43/73 (58.90%), Query Frame = 2 Query: 452 VLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPVIE 670 +L ++ATPIPRTL +A+ G L+ I P R+ IKT+I E + K +L E+ GG+VY +Y ++ Sbjct: 416 ILTLTATPIPRTLNMAMTGIKDLSIIAKPPAQRLAIKTFI---QEYSPILIRKTILREISRGGQVYYIYNKVQ 485
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: MFD_ECOLI (Transcription-repair-coupling factor OS=Escherichia coli (strain K12) GN=mfd PE=1 SV=2) HSP 1 Score: 61.2326 bits (147), Expect = 1.755e-17 Identity = 35/99 (35.35%), Postives = 52/99 (52.53%), Query Frame = 3 Query: 93 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNS 389 Q A +VPT LLA QHY++ N +I +++ K+ I ++ G I ++IGTH L+ V+F L L IVDE+ RFGV + R + Sbjct: 651 QVAVLVPTTLLAQQHYDNFRDRFANWPV-----RIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKA 744 HSP 2 Score: 49.2914 bits (116), Expect = 1.755e-17 Identity = 32/94 (34.04%), Postives = 53/94 (56.38%), Query Frame = 2 Query: 452 VLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYEN--VYKMMLDELQSGGKVYLVYPVIEQ--------SEQLPQLRAA 703 +L ++ATPIPRTL +A+ G L+ I P R+ +KT++ E Y++ V + +L E+ GG+VY +Y +E +E +P+ R A Sbjct: 751 ILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVRE-----YDSMVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIA 839
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: MFD_RICTY (Transcription-repair-coupling factor OS=Rickettsia typhi GN=mfd PE=3 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 3.857e-17 Identity = 31/94 (32.98%), Postives = 56/94 (59.57%), Query Frame = 3 Query: 93 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQR 374 Q A +VPT +L +QH+ ++ + I L+ +++ +IR +L +G I ++IGTH+L+ + ++F L+L I+DE+Q FGV Q+ Sbjct: 631 QVAVVVPTTILCSQHFSRFIERFKGFGLN-----IKQLSSVVSSQEANIIRLELASGKINIIIGTHTLLHKNIKFFNLKLLIIDEEQHFGVSQK 719 HSP 2 Score: 46.9802 bits (110), Expect = 3.857e-17 Identity = 32/90 (35.56%), Postives = 49/90 (54.44%), Query Frame = 2 Query: 449 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPVIEQSEQL-PQLRAAASDL 715 HVLAMSATPIPRTL ++L G L+ I P R+ ++T ++ + + +L E GG+ + V P I+ E + QL+ +L Sbjct: 730 HVLAMSATPIPRTLQMSLTGLKELSIIATPPLNRLEVRTSVMPFDT---VIIRDALLREHFRGGRSFYVVPRIKDMEDIEKQLKQIVPEL 816
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: MFD_RICPR (Transcription-repair-coupling factor OS=Rickettsia prowazekii GN=mfd PE=3 SV=2) HSP 1 Score: 62.3882 bits (150), Expect = 8.470e-17 Identity = 32/94 (34.04%), Postives = 55/94 (58.51%), Query Frame = 3 Query: 93 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQR 374 Q A +VPT +L +QH+ ++ + I L+ K++ +IR +L +G I ++IGTH+L+ + +F L+L I+DE+Q FGV Q+ Sbjct: 631 QVAVVVPTTILCSQHFSRFIERFKGFGLN-----IKQLSSVISSKEANIIRLELASGKINIIIGTHALLHKNTKFFNLKLLIIDEEQHFGVSQK 719 HSP 2 Score: 45.8246 bits (107), Expect = 8.470e-17 Identity = 31/90 (34.44%), Postives = 49/90 (54.44%), Query Frame = 2 Query: 449 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPVIEQSEQL-PQLRAAASDL 715 HVLAMSATPIPRTL +++ G L+ I P R+ ++T ++ + + +L E GG+ + V P I+ E + QL+ +L Sbjct: 730 HVLAMSATPIPRTLQMSMTGLKELSIIATPPLNRLEVRTSVMPFDP---VIIRDALLREHFRGGRSFYVAPRIKDMEDIEKQLKQIVPEL 816
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: MFD_BUCBP (Transcription-repair-coupling factor OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=mfd PE=3 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 1.176e-15 Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = 2 Query: 452 VLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPVIEQSEQ 682 VL ++ATPIPRTL +A G L+ I P R+ +KT++ E Y + K +L E+ GG+VY +Y + + E+ Sbjct: 304 VLTLTATPIPRTLNMAFVGIRDLSIIATPPKQRLIVKTFV---REFSYTVIRKAILREILRGGQVYYIYNNVNKIER 377 HSP 2 Score: 51.6026 bits (122), Expect = 1.176e-15 Identity = 29/91 (31.87%), Postives = 49/91 (53.85%), Query Frame = 3 Query: 93 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGV 365 Q A +VPT LLA QH+ + + KI +L+ + I ++ G++ ++IGTH ++ + +++ L L IVDE+ RFGV Sbjct: 204 QVAILVPTTLLAQQHFNNF-----TLRFKYWSTKIEILSRFQSETKCNEIINNVNIGNVHVLIGTHKILLKNLKWKNLGLLIVDEEHRFGV 289
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: MFD_MYXXA (Transcription-repair-coupling factor OS=Myxococcus xanthus GN=mfd PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 2.551e-15 Identity = 34/94 (36.17%), Postives = 52/94 (55.32%), Query Frame = 3 Query: 93 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQR 374 Q A +VPT +LA QH+ K + + + +++G + R I K + G + ++IGTH L+ +V F L L IVDE+QRFGV Q+ Sbjct: 706 QVAVLVPTTVLAQQHFLSFKKRFAD-----YPVTVEVISGLKKAPEVREILKRAKEGKVDILIGTHKLLGGEVAFKELGLMIVDEEQRFGVKQK 794 HSP 2 Score: 43.1282 bits (100), Expect = 2.551e-15 Identity = 29/85 (34.12%), Postives = 49/85 (57.65%), Query Frame = 2 Query: 452 VLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLD-ELQSGGKVYLVYPVIEQSEQL-PQLRA 700 VL ++ATPIPRTL +++ G ++ I P R I+T+++ K + V K ++ E+ GG+V+ V+ +E + QLRA Sbjct: 806 VLTLTATPIPRTLHMSMSGVRDMSIIATPPQDRRAIRTFVM----KYEDTVVKEAIEREVARGGQVFFVHNRVESLPSIETQLRA 886
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: RECG_HELPY (ATP-dependent DNA helicase recG OS=Helicobacter pylori GN=recG PE=3 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 4.370e-15 Identity = 30/83 (36.14%), Postives = 53/83 (63.86%), Query Frame = 2 Query: 446 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPVIEQSEQLPQL 694 PH L SATPIPRTLALA + T I ++P + I+T ++ +++ ++ V + + +E+ +V +VYP++ +SE++P L Sbjct: 377 PHSLQFSATPIPRTLALAKSAFVKTTMIREIPYPK-EIETLVL--HKRDFKIVMEKISEEIAKNHQVIVVYPLVNESEKIPYL 456 HSP 2 Score: 46.595 bits (109), Expect = 4.370e-15 Identity = 32/90 (35.56%), Postives = 45/90 (50.00%), Query Frame = 3 Query: 105 MVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQR 374 M PT +LA Q Y LK L E + LL G + K+S + + + +VIGT +L+ +K + + L I DEQ RFG QR Sbjct: 284 MAPTSILAKQLYNEALKFLPPYFE------VELLLGGSYKKRSNHLFETITH----VVIGTQALLFDKRDLNEFALVITDEQHRFGTKQR 363
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: RECG_HELPJ (ATP-dependent DNA helicase recG OS=Helicobacter pylori J99 GN=recG PE=3 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 4.370e-15 Identity = 31/83 (37.35%), Postives = 51/83 (61.45%), Query Frame = 2 Query: 446 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPVIEQSEQLPQL 694 PH L SATPIPRTLALA + T I ++P + I+T ++ E ++ V + + +E+ +V +VYP++ +SE++P L Sbjct: 377 PHSLQFSATPIPRTLALAKSAFVKTTMIREIPYPK-EIETLVLHKRE--FKIVMEKISEEIAKNHQVIVVYPLVNKSEKIPYL 456 HSP 2 Score: 46.9802 bits (110), Expect = 4.370e-15 Identity = 32/90 (35.56%), Postives = 45/90 (50.00%), Query Frame = 3 Query: 105 MVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQR 374 M PT +LA Q Y LK L E + LL G + K+S + + + +VIGT +L+ +K + + L I DEQ RFG QR Sbjct: 284 MAPTSILAKQLYHEALKFLPPYFE------VELLLGGSHKKRSNHLFEKITH----VVIGTQALLFDKRDLNEFALVITDEQHRFGTKQR 363
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: MFD_HELPJ (Transcription-repair-coupling factor OS=Helicobacter pylori J99 GN=mfd PE=3 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 1.232e-14 Identity = 33/94 (35.11%), Postives = 52/94 (55.32%), Query Frame = 3 Query: 93 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQR 374 Q+A +VPT LLA QH+E L +N K+A L + + K ++ G + ++IGTH+++ K F L L +VDE+ +FGV Q+ Sbjct: 535 QSALVVPTTLLAHQHFETLKARFENF-----GVKVARLDRYIKTSEKSKLLKAVELGLVDVLIGTHAILGTK--FKNLGLMVVDEEHKFGVKQK 621 HSP 2 Score: 45.8246 bits (107), Expect = 1.232e-14 Identity = 24/70 (34.29%), Postives = 43/70 (61.43%), Query Frame = 2 Query: 449 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVY 658 H L+MSATPIPRTL +AL ++ + P R P +T++ E N+ E + +++ EL+ G+++ ++ Sbjct: 632 HFLSMSATPIPRTLNMALSQIKGISSLKTPPTDRKPSRTFLKEKND---ELLKEIIYRELRRNGQIFYIH 698 The following BLAST results are available for this feature:
BLAST of EY702711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702711 ID=EY702711; Name=EY702711; organism=Citrus sinensis; type=EST; length=869bpback to top |