EY702711
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: MFD_MYCTU (Transcription-repair-coupling factor OS=Mycobacterium tuberculosis GN=mfd PE=3 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 1.593e-14 Identity = 35/99 (35.35%), Postives = 49/99 (49.49%), Query Frame = 3 Query: 93 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNS 389 Q A +VPT LLA QH + + + I L+ T +SR + L G + +VIGTH L+ V + L L +VDE+QRFGV + S Sbjct: 699 QVAVLVPTTLLADQHLQTFGERMSGFPVT-----IKGLSRFTDAAESRAVIDGLADGSVDIVIGTHRLLQTGVRWKDLGLVVVDEEQRFGVEHKEHIKS 792 HSP 2 Score: 44.669 bits (104), Expect = 1.593e-14 Identity = 34/110 (30.91%), Postives = 51/110 (46.36%), Query Frame = 2 Query: 452 VLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPVIEQ--------SEQLPQLRAAASD-------LETISQRF 736 VL MSATPIPRTL ++L G ++ I P R P+ TY+ ++K + + EL G+ + V+ + E +P+ R + LET QRF Sbjct: 799 VLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGPHDDK---QIAAALRRELLRDGQAFYVHNRVSSIDAAAARVRELVPEARVVVAHGQMPEDLLETTVQRF 905
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: MFD_MYCBO (Transcription-repair-coupling factor OS=Mycobacterium bovis GN=mfd PE=3 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 1.593e-14 Identity = 35/99 (35.35%), Postives = 49/99 (49.49%), Query Frame = 3 Query: 93 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNS 389 Q A +VPT LLA QH + + + I L+ T +SR + L G + +VIGTH L+ V + L L +VDE+QRFGV + S Sbjct: 699 QVAVLVPTTLLADQHLQTFGERMSGFPVT-----IKGLSRFTDAAESRAVIDGLADGSVDIVIGTHRLLQTGVRWKDLGLVVVDEEQRFGVEHKEHIKS 792 HSP 2 Score: 44.669 bits (104), Expect = 1.593e-14 Identity = 34/110 (30.91%), Postives = 51/110 (46.36%), Query Frame = 2 Query: 452 VLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPVIEQ--------SEQLPQLRAAASD-------LETISQRF 736 VL MSATPIPRTL ++L G ++ I P R P+ TY+ ++K + + EL G+ + V+ + E +P+ R + LET QRF Sbjct: 799 VLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGPHDDK---QIAAALRRELLRDGQAFYVHNRVSSIDAAAARVRELVPEARVVVAHGQMPEDLLETTVQRF 905
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: MFD_HELPY (Transcription-repair-coupling factor OS=Helicobacter pylori GN=mfd PE=3 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 5.920e-14 Identity = 33/94 (35.11%), Postives = 51/94 (54.26%), Query Frame = 3 Query: 93 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQR 374 Q+A +VPT LLA QH+E L +N K+A L + + K ++ G + +IGTH+++ K F L L +VDE+ +FGV Q+ Sbjct: 535 QSALVVPTTLLAHQHFETLRARFENF-----GVKVARL--DRYASEKNKLLKAVELGQVDALIGTHAILGAK--FKNLGLVVVDEEHKFGVKQK 619 HSP 2 Score: 45.8246 bits (107), Expect = 5.920e-14 Identity = 24/70 (34.29%), Postives = 43/70 (61.43%), Query Frame = 2 Query: 449 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVY 658 H L+MSATPIPRTL +AL ++ + P R P +T++ E N+ E + +++ EL+ G+++ ++ Sbjct: 630 HFLSMSATPIPRTLNMALSQIKGISSLKTPPTDRKPSRTFLKEKND---ELLKEIIYRELRRNGQIFYIH 696
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: MFD_BORBU (Transcription-repair-coupling factor OS=Borrelia burgdorferi GN=mfd PE=3 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 1.359e-12 Identity = 32/94 (34.04%), Postives = 50/94 (53.19%), Query Frame = 3 Query: 93 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQR 374 Q + PT +LA QH+ K N KI +L+ I K+L++G I ++IGTH ++++K L L I+DE+QRFGV ++ Sbjct: 633 QVIVLSPTTILAEQHFNTFKKRFKNFPI-----KIEVLSRFIKNNAESRILKELKSGKIDIIIGTHKILSKKFTCKNLGLIIIDEEQRFGVKEK 721 HSP 2 Score: 37.7354 bits (86), Expect = 1.359e-12 Identity = 26/80 (32.50%), Postives = 43/80 (53.75%), Query Frame = 2 Query: 455 LAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPVIEQSEQLPQL 694 LA+SATPIPR+L ++L ++ + P R+ I+ Y+ +E ++ + EL G+V+LV IE+ L L Sbjct: 734 LALSATPIPRSLHMSLIKLRDISVLKIPPQNRVKIEAYLESFSELLIKHAIE---SELSRDGQVFLVNHNIEELYYLKTL 810 The following BLAST results are available for this feature:
BLAST of EY702711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702711 ID=EY702711; Name=EY702711; organism=Citrus sinensis; type=EST; length=869bpback to top |