EY702705

Overview
NameEY702705
Unique NameEY702705
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9997 contig Csv1_Contig9997:1..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: RELA_ECOL6 (GTP pyrophosphokinase OS=Escherichia coli O6 GN=relA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.510e-29
Identity = 64/136 (47.06%), Postives = 84/136 (61.76%), Query Frame = 3 
Query:   27 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCE 428
            GR K +YSI  KM KK L  DE+ D+  +R++ E  +DCY AL +VH  +  +P +  DY+  PK NGYQS+HTVV G G   +E+QIRTK+MH  AE G AAHW+YKEG       S     + W R ++ WQ E
Sbjct:  251 GRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEE 386
[Close]
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: RELA_ECO57 (GTP pyrophosphokinase OS=Escherichia coli O157:H7 GN=relA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.510e-29
Identity = 64/136 (47.06%), Postives = 84/136 (61.76%), Query Frame = 3 
Query:   27 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCE 428
            GR K +YSI  KM KK L  DE+ D+  +R++ E  +DCY AL +VH  +  +P +  DY+  PK NGYQS+HTVV G G   +E+QIRTK+MH  AE G AAHW+YKEG       S     + W R ++ WQ E
Sbjct:  251 GRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEE 386
[Close]
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: RELA_STAES (GTP pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=relA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.973e-29
Identity = 62/110 (56.36%), Postives = 75/110 (68.18%), Query Frame = 3 
Query:   27 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 356
            GR K +YSI+ KM+K+K   D+I D+  +R+IV +  DCY  L +VH LW  +PG+ KDYI  PK N YQSLHT V G    PLE+QIRT EMH  AE G AAHW YKEG
Sbjct:  240 GRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVGPNGDPLEIQIRTHEMHEIAEHGVAAHWAYKEG 349
[Close]
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: RELA_STAEQ (GTP pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=relA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.973e-29
Identity = 62/110 (56.36%), Postives = 75/110 (68.18%), Query Frame = 3 
Query:   27 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 356
            GR K +YSI+ KM+K+K   D+I D+  +R+IV +  DCY  L +VH LW  +PG+ KDYI  PK N YQSLHT V G    PLE+QIRT EMH  AE G AAHW YKEG
Sbjct:  240 GRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVGPNGDPLEIQIRTHEMHEIAEHGVAAHWAYKEG 349
[Close]
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: RELA_BACSU (GTP pyrophosphokinase OS=Bacillus subtilis GN=relA PE=3 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 5.740e-29
Identity = 72/183 (39.34%), Postives = 99/183 (54.10%), Query Frame = 3 
Query:   27 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDR---------------SFVGNGDSIKPPCTFPSHAADCPFSYK 527
            GR K +YSI+ KM+ +    +EI+D+  +R++V + +DCY  L ++H  W  +PG+ KDYI  PK N YQSLHT V G    PLEVQIRT EMH  AE+G AAHW YKEG   +     +  + W R +L +Q E+   +                 F   GD I+     PS +    FSY+
Sbjct:  240 GRPKHIYSIYRKMVLQNKQFNEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTFEMHEIAEYGVAAHWAYKEGKAANEGATFEKKLSWFREILEFQNESTDAEEFMESLKIDLFSDMVYVFTPKGDVIE----LPSGSVPIDFSYR 418
[Close]
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: RELA_STRAT (GTP pyrophosphokinase OS=Streptomyces antibioticus GN=relA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.496e-29
Identity = 65/148 (43.92%), Postives = 87/148 (58.78%), Query Frame = 3 
Query:   27 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV--------------LQMVEWARWVLTWQCE 428
            GR K  YS++ K++ +     EI+D+ G+R++V+   DCY AL  VH  W  VPG+ KDYI  PKFN YQSLHT V G    P+E+QIRT +MH +AE+G AAHW+YK+     +S V              L  + W R +L WQ E
Sbjct:  334 GRPKHYYSVYQKIIVRGRDFAEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPNGKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVARASKVRTDVPKPAKGKDDHLNDMAWLRQLLDWQKE 481
[Close]
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: RELA_STAAW (GTP pyrophosphokinase OS=Staphylococcus aureus (strain MW2) GN=relA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.670e-28
Identity = 61/110 (55.45%), Postives = 75/110 (68.18%), Query Frame = 3 
Query:   27 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 356
            GR K +YSI+ KM+K+K   D+I D+  +R+IV +  DCY  L +VH LW  +PG+ KDYI  PK N YQSLHT V G    PLE+QIRT +MH  AE G AAHW YKEG
Sbjct:  247 GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVGPNGDPLEIQIRTFDMHEIAEHGVAAHWAYKEG 356
[Close]
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: RELA_STAAU (GTP pyrophosphokinase OS=Staphylococcus aureus GN=relA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.670e-28
Identity = 61/110 (55.45%), Postives = 75/110 (68.18%), Query Frame = 3 
Query:   27 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 356
            GR K +YSI+ KM+K+K   D+I D+  +R+IV +  DCY  L +VH LW  +PG+ KDYI  PK N YQSLHT V G    PLE+QIRT +MH  AE G AAHW YKEG
Sbjct:  247 GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVGPNGDPLEIQIRTFDMHEIAEHGVAAHWAYKEG 356
[Close]
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: RELA_STAAS (GTP pyrophosphokinase OS=Staphylococcus aureus (strain MSSA476) GN=relA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.670e-28
Identity = 61/110 (55.45%), Postives = 75/110 (68.18%), Query Frame = 3 
Query:   27 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 356
            GR K +YSI+ KM+K+K   D+I D+  +R+IV +  DCY  L +VH LW  +PG+ KDYI  PK N YQSLHT V G    PLE+QIRT +MH  AE G AAHW YKEG
Sbjct:  247 GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVGPNGDPLEIQIRTFDMHEIAEHGVAAHWAYKEG 356
[Close]
BLAST of EY702705 vs. ExPASy Swiss-Prot
Match: RELA_STAAR (GTP pyrophosphokinase OS=Staphylococcus aureus (strain MRSA252) GN=relA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.670e-28
Identity = 61/110 (55.45%), Postives = 75/110 (68.18%), Query Frame = 3 
Query:   27 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 356
            GR K +YSI+ KM+K+K   D+I D+  +R+IV +  DCY  L +VH LW  +PG+ KDYI  PK N YQSLHT V G    PLE+QIRT +MH  AE G AAHW YKEG
Sbjct:  247 GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVGPNGDPLEIQIRTFDMHEIAEHGVAAHWAYKEG 356
The following BLAST results are available for this feature:
BLAST of EY702705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
RELA_ECOL61.510e-2947.06GTP pyrophosphokinase OS=Escherichia coli O6 GN=re... [more]
RELA_ECO571.510e-2947.06GTP pyrophosphokinase OS=Escherichia coli O157:H7 ... [more]
RELA_STAES1.973e-2956.36GTP pyrophosphokinase OS=Staphylococcus epidermidi... [more]
RELA_STAEQ1.973e-2956.36GTP pyrophosphokinase OS=Staphylococcus epidermidi... [more]
RELA_BACSU5.740e-2939.34GTP pyrophosphokinase OS=Bacillus subtilis GN=relA... [more]
RELA_STRAT7.496e-2943.92GTP pyrophosphokinase OS=Streptomyces antibioticus... [more]
RELA_STAAW1.670e-2855.45GTP pyrophosphokinase OS=Staphylococcus aureus (st... [more]
RELA_STAAU1.670e-2855.45GTP pyrophosphokinase OS=Staphylococcus aureus GN=... [more]
RELA_STAAS1.670e-2855.45GTP pyrophosphokinase OS=Staphylococcus aureus (st... [more]
RELA_STAAR1.670e-2855.45GTP pyrophosphokinase OS=Staphylococcus aureus (st... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-C10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702705 ID=EY702705; Name=EY702705; organism=Citrus sinensis; type=EST; length=871bp
AAAACATCTCCTTCCTTGTTCTATGTGGGCGGCATAAAAGCTTGTACAGC
ATTCACTGCAAAATGTTGAAAAAGAAGCTGACCATGGATGAAATCCATGA
TATCTATGGTCTTCGTTTAATTGTTGAAAATGAGGAAGACTGCTACCAAG
CACTGAGAGTTGTTCATCAGTTGTGGGCTGAAGTACCTGGAAAGATGAAG
GATTACATAACCCGGCCCAAGTTCAACGGGTATCAGTCGCTTCACACAGT
GGTGACAGGTGAAGGTCTGGTTCCACTTGAAGTTCAAATCCGAACAAAAG
AGATGCATTTGCAGGCTGAGTTTGGGTTTGCTGCTCATTGGAGATATAAA
GAAGGTGATTGCCAGCATTCTTCTTTTGTGCTTCAGATGGTTGAGTGGGC
TAGATGGGTTCTTACCTGGCAGTGTGAGGCAATGAGCAAAGATCGTTCTT
TTGTTGGCAATGGTGACTCCATCAAGCCACCATGCACGTTTCCCTCACAT
GCTGCTGATTGCCCATTTTCTTATAAGCCTCAGTGCAGCCATGATGGACC
TGTCTTTGTCATCATGATTGAGAATGATAAGATGTCAGTGCAGGAGTTTC
CTACAAGCTCAACAGTAATGGATTTGCTGGAAAGAGCCGGACGGGGAAGC
TCAAGATGGTCTCCGTATGGGTTCCCTCTGAAGGAAGAATTGAGGCCAAA
GCTGAACCACAAGGCAGTAGGTGATCCCAGATGTAAGTTGAAAATGGGTG
ATGTGGTAGAGCTCACTCCAGCTATACCTGACAAATCTTTTACGGAATAC
AGAGAAGAGATCCAGCGGATGTATGAGCGNAGCCTGGCAGTATCAACACA
GGACCTGCTGTCACAGCATGG
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