DY305825

Overview
NameDY305825
Unique NameDY305825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length988
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: ERF17_ARATH (Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana GN=ERF017 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.561e-11
Identity = 38/113 (33.63%), Postives = 59/113 (52.21%), Query Frame = 3 
Query:  309 LEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEIGEISLDSDEVQQVDCGKKRKYEENEEFERKVAVKKEETVSG 647
            +E +    +  Y+GVR+R WGK+ +EIR PN +  R+WLG+++T  +AA+A+D A + +RG  A  NFP          D    +  G+     E  E   + A   E+  SG
Sbjct:    1 MEGSSSSMQSKYKGVRKRKWGKWVSEIRLPNSR-ERIWLGSYDTPEKAARAFDAALYCLRGNNAKFNFP----------DNPPVISGGRNLSRSEIREAAARFANSAEDDSSG 102
The following BLAST results are available for this feature:
BLAST of DY305825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
ERF17_ARATH8.561e-1133.63Ethylene-responsive transcription factor ERF017 OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2CA01RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305825 ID=DY305825; Name=DY305825; organism=Citrus sinensis; type=EST; length=988bp
GCCACTTCCTGTTTACTCAAATTTTACAACTAATATTTTTTGAAATGGCA
GCTGGTCATCATCATCACCAAGATCATGAAGCTTTAACCTTAGAGCGCAT
AAGCCAGTACCTCCTCAATGACTTAACACCGATGGATAGCTATAGCTTCA
TCTCCAACCTCCCGCAGCAAAACCCTGCTTCCACTGATGAACAAATTTTA
GTACAAAAGACATCAAGCACTCTAAGTCAACGCAAGCCTTCTTCTATAAA
CGTAAGAATACCTCCTCCAACTACTAGCATCTTCAGGTTGAAAGATGAAG
ATAAAGATTTGGAGGTTGCTGACGATTACAAGGAAAGGCATTACAGGGGA
GTGAGGAGACGGCCGTGGGGAAAATATGCAGCTGAAATTCGTGACCCGAA
TAAAAAGGGGACCCGGGTTTGGCTTGGAACATTTAATACTGCCGTTGAAG
CTGCGAAAGCTTATGACAACGCTGCCTTTAAGATGCGTGGAAGAAAAGCC
ATACTGAATTTTCCTCTTGAAATTGGTGAGATCAGTTTGGACTCTGATGA
AGTGCAGCAAGTTGATTGTGGGAAAAAGAGGAAATATGAGGAAAACGAGG
AGTTTGAGAGAAAAGTGGCCGTGAAGAAGGAGGAAACGGTGAGTGGGTGG
TGTTGGACTANGCCCTTTGACGCCGTCAAGTTGGACCGGGTTTTGGGATG
ATGGAAATGGGATATTTAGTGTGCCGCCGTTATCTCCTTGCTTTGGCCAG
TTGGGCGTTTGCTTAATTTGGAAATATTTGACGGCAAAACACTATTTGAT
GACCTGGGAATGAATTATCCACTTGGTTAAATACTTAACCCACGAATGAA
ACTTGTTTAACCCTGCCATGCACCTAAATTTAAAATAAAAAATTGAATTT
CCCAAACAATTGGCTTTTTTTTTTTTTTTTGGAACCCATGTTTTTTAAAA
AAACTTTTTAATTATTTTATTAATTTGTTTTTTTTTTT
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