DY305825

Overview
NameDY305825
Unique NameDY305825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length988
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.729e-15
Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 3
Query:  336 RHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPL 518
            + +RGVR+RPWGK+AAEIRDP ++  R+WLGTF TA EAA  YDNAA ++RG  A+ NF +
Sbjct:  123 KKFRGVRQRPWGKWAAEIRDPEQR-RRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNFSI 182          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: ESR1_ARATH (Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana GN=ESR1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.667e-14
Identity = 53/113 (46.90%), Postives = 64/113 (56.64%), Query Frame = 3
Query:  189 EQILVQKTSSTLSQRKPSSINVRIPPPTTSIF----RLKDEDKDLEVAD-DYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNF 512
            E+ L   T ST S   P+ +      PT S      +L  +D  + +A        YRGVRRRPWG+YAAEIRDP  K  R WLGTF+TA +AA AYD+AA   RG KA  NF
Sbjct:    2 EKALRNFTESTHSP-DPNPLTKFFTEPTASPVSRNRKLSSKDTTVTIAGAGSSTTRYRGVRRRPWGRYAAEIRDPMSKERR-WLGTFDTAEQAACAYDSAARAFRGAKARTNF 112          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: ERF43_ARATH (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana GN=ERF043 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.667e-14
Identity = 39/76 (51.32%), Postives = 52/76 (68.42%), Query Frame = 3
Query:  288 LKDEDKDLEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFP 515
            + D   D E  ++ K+  YRGVR R WGK+ +EIR+P KK +R+WLGTF TA  A +A+D AA  ++G  AILNFP
Sbjct:    1 MADSSSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKK-SRIWLGTFPTAEMAMRAHDVAAMSIKGTSAILNFP 75          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: ERF36_ARATH (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF036 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.667e-14
Identity = 45/130 (34.62%), Postives = 70/130 (53.85%), Query Frame = 3
Query:  126 TPMDSYSFISNLPQQNPASTDEQILVQKTSSTLSQRKPSSINVRIPPPTTSIFRLKDEDKDLEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFP 515
            T +   + +++      +S+D+      TS+ LS+ +        PP   +  + + +      +   +   YRGVR R WGK+ +EIR P KK TR+WLGTF TA  AA+A+D AA  ++G  A+LNFP
Sbjct:   14 TRVQKMTSLNSSASPTSSSSDQSDATTTTSTHLSEEEA-------PPRNNNTRKRRRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKK-TRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFP 135          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: DRE2G_ARATH (Dehydration-responsive element-binding protein 2G OS=Arabidopsis thaliana GN=DREB2G PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.667e-14
Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 3
Query:  342 YRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILN 509
            +RGVR+R WGK+ AEIR+PN+ GTR+WLGTFNT+VEAA AYD AA K+ G +A LN
Sbjct:   34 FRGVRQRTWGKWVAEIREPNR-GTRLWLGTFNTSVEAAMAYDEAAKKLYGHEAKLN 88          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: LEP_ARATH (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.177e-14
Identity = 42/70 (60.00%), Postives = 47/70 (67.14%), Query Frame = 3
Query:  303 KDLEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNF 512
            K  +  DD     + GVRRRPWG+YAAEIRDP  K  R WLGTF+TA EAA AYD AA  MRG +A  NF
Sbjct:    7 KSKKKQDDQVGTRFLGVRRRPWGRYAAEIRDPTTK-ERHWLGTFDTAEEAALAYDRAARSMRGTRARTNF 75          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: ESR2_ARATH (Ethylene-responsive transcription factor ESR2 OS=Arabidopsis thaliana GN=ESR2 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.177e-14
Identity = 42/57 (73.68%), Postives = 44/57 (77.19%), Query Frame = 3
Query:  342 YRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNF 512
            YRGVRRRPWG+YAAEIRDP  K  R WLGTF+TA EAA AYD AA  MRG KA  NF
Sbjct:   58 YRGVRRRPWGRYAAEIRDPLSKERR-WLGTFDTAEEAACAYDCAARAMRGLKARTNF 113          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.843e-14
Identity = 39/74 (52.70%), Postives = 52/74 (70.27%), Query Frame = 3
Query:  294 DEDKDLEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFP 515
            +E+K   V D  K   YRGVR+R WGK+ +EIR+P KK +R+WLGTF +   AA+A+D AA  ++G  AILNFP
Sbjct:   20 EEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKK-SRIWLGTFPSPEMAARAHDVAALSIKGASAILNFP 92          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: ERF60_ARATH (Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana GN=ERF060 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.843e-14
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 3
Query:  333 ERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFP 515
            ++ YRGVR+R WGK+ AEIR P K  TR+WLGTF+TA EAA AYD AA+K+RG  A LNFP
Sbjct:   90 QKLYRGVRQRHWGKWVAEIRLP-KNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFP 149          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: ERF23_ARATH (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF023 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.714e-14
Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 3
Query:  237 PSSINVRIPP-----PTTSIFRLKDEDKDLEVADDYKERH--YRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEIGEI 533
            P  + +  PP     PT +   +K      +       RH  Y GVR+R WGK+ +EIR+P KK +R+WLG+F     AAKAYD AAF ++GRKA LNFP EI ++
Sbjct:    3 PQRMKLSSPPVTNNEPTATASAVKSCGGGGKETSSSTTRHPVYHGVRKRRWGKWVSEIREPRKK-SRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPEEIEDL 107          
The following BLAST results are available for this feature:
BLAST of DY305825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
CRF3_ARATH5.729e-1560.66Ethylene-responsive transcription factor CRF3 OS=A... [more]
ESR1_ARATH1.667e-1446.90Ethylene-responsive transcription factor ESR1 OS=A... [more]
ERF43_ARATH1.667e-1451.32Ethylene-responsive transcription factor ERF043 OS... [more]
ERF36_ARATH1.667e-1434.62Ethylene-responsive transcription factor ERF036 OS... [more]
DRE2G_ARATH1.667e-1467.86Dehydration-responsive element-binding protein 2G ... [more]
LEP_ARATH2.177e-1460.00Ethylene-responsive transcription factor LEP OS=Ar... [more]
ESR2_ARATH2.177e-1473.68Ethylene-responsive transcription factor ESR2 OS=A... [more]
TINY_ARATH2.843e-1452.70Ethylene-responsive transcription factor TINY OS=A... [more]
ERF60_ARATH2.843e-1465.57Ethylene-responsive transcription factor ERF060 OS... [more]
ERF23_ARATH3.714e-1443.40Ethylene-responsive transcription factor ERF023 OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2CA01RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305825 ID=DY305825; Name=DY305825; organism=Citrus sinensis; type=EST; length=988bp
GCCACTTCCTGTTTACTCAAATTTTACAACTAATATTTTTTGAAATGGCA
GCTGGTCATCATCATCACCAAGATCATGAAGCTTTAACCTTAGAGCGCAT
AAGCCAGTACCTCCTCAATGACTTAACACCGATGGATAGCTATAGCTTCA
TCTCCAACCTCCCGCAGCAAAACCCTGCTTCCACTGATGAACAAATTTTA
GTACAAAAGACATCAAGCACTCTAAGTCAACGCAAGCCTTCTTCTATAAA
CGTAAGAATACCTCCTCCAACTACTAGCATCTTCAGGTTGAAAGATGAAG
ATAAAGATTTGGAGGTTGCTGACGATTACAAGGAAAGGCATTACAGGGGA
GTGAGGAGACGGCCGTGGGGAAAATATGCAGCTGAAATTCGTGACCCGAA
TAAAAAGGGGACCCGGGTTTGGCTTGGAACATTTAATACTGCCGTTGAAG
CTGCGAAAGCTTATGACAACGCTGCCTTTAAGATGCGTGGAAGAAAAGCC
ATACTGAATTTTCCTCTTGAAATTGGTGAGATCAGTTTGGACTCTGATGA
AGTGCAGCAAGTTGATTGTGGGAAAAAGAGGAAATATGAGGAAAACGAGG
AGTTTGAGAGAAAAGTGGCCGTGAAGAAGGAGGAAACGGTGAGTGGGTGG
TGTTGGACTANGCCCTTTGACGCCGTCAAGTTGGACCGGGTTTTGGGATG
ATGGAAATGGGATATTTAGTGTGCCGCCGTTATCTCCTTGCTTTGGCCAG
TTGGGCGTTTGCTTAATTTGGAAATATTTGACGGCAAAACACTATTTGAT
GACCTGGGAATGAATTATCCACTTGGTTAAATACTTAACCCACGAATGAA
ACTTGTTTAACCCTGCCATGCACCTAAATTTAAAATAAAAAATTGAATTT
CCCAAACAATTGGCTTTTTTTTTTTTTTTTGGAACCCATGTTTTTTAAAA
AAACTTTTTAATTATTTTATTAATTTGTTTTTTTTTTT
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