DY305825

Overview
NameDY305825
Unique NameDY305825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length988
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: ABI4_ARATH (Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana GN=ABI4 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 4.106e-13
Identity = 50/127 (39.37%), Postives = 69/127 (54.33%), Query Frame = 3
Query:  177 ASTDEQILVQKTSSTLSQRKPSSINVRIPPPTTSIFRLKDEDKDLEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNF-PLEIGEISLDSDEV 554
            AS  +   ++  + TL+   P S +      +TS  + K + K      D  +  YRGVR+R WGK+ AEIR+P K+ TR WLGTF TA +AA+AYD AA  + G +A LN  P     +S  S  V
Sbjct:    5 ASQHQHNHLEDNNQTLTHNNPQSDSTT--DSSTSSAQRKRKGKG---GPDNSKFRYRGVRQRSWGKWVAEIREPRKR-TRKWLGTFATAEDAARAYDRAAVYLYGSRAQLNLTPSSPSSVSSSSSSV 125          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: ERF84_ARATH (Ethylene-responsive transcription factor ERF084 OS=Arabidopsis thaliana GN=ERF084 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.362e-13
Identity = 41/96 (42.71%), Postives = 63/96 (65.62%), Query Frame = 3
Query:  342 YRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEIGEISLDSDEVQQVDCGKKRKYEENEEFERKVAVKK 629
            + GVR+RPWG+++AEIRD   +  R WLGTF+TA EAA+AYD AA ++RG KA  NF +      L   E+ Q     + + ++ ++ ++KV+V+K
Sbjct:  116 FMGVRKRPWGRWSAEIRDRIGR-CRHWLGTFDTAEEAARAYDAAARRLRGTKAKTNFVIP----PLFPKEIAQAQEDNRMRQKQKKKKKKKVSVRK 206          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.362e-13
Identity = 39/77 (50.65%), Postives = 53/77 (68.83%), Query Frame = 3
Query:  342 YRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEIGE-----ISLDSDEVQ 557
            YRG R R WGK+ +EIR+P KK +R+WLGTF TA  AA+A+D AA  ++G  AILNFP E+ +     +SL   ++Q
Sbjct:   26 YRGARMRSWGKWVSEIREPRKK-SRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFP-ELADFLPRPVSLSQQDIQ 100          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: ERF21_ARATH (Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana GN=ERF021 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.362e-13
Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 3
Query:  342 YRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFP 515
            YRGVR+R WGK+ +EIR+P  K  R+WLG+F T   AA AYD AAF  RGR+A LNFP
Sbjct:   24 YRGVRKRKWGKWVSEIREPGTKN-RIWLGSFETPEMAATAYDVAAFHFRGREARLNFP 80          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: DRE1A_ARATH (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana GN=DREB1A PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 5.362e-13
Identity = 37/57 (64.91%), Postives = 44/57 (77.19%), Query Frame = 3
Query:  342 YRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNF 512
            YRGVRRR  GK+  E+R+PNKK TR+WLGTF TA  AA+A+D AA  +RGR A LNF
Sbjct:   51 YRGVRRRNSGKWVCEVREPNKK-TRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 106          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: ERF69_ARATH (Ethylene-responsive transcription factor ERF069 OS=Arabidopsis thaliana GN=ERF069 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.003e-13
Identity = 42/80 (52.50%), Postives = 53/80 (66.25%), Query Frame = 3
Query:  333 ERHYRGVRRRPWGKYAAEIRDPNKKGT--RVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEIGEISLDSDEVQQVD 566
            ++ +RGVR+RPWGK+AAEIR    KG   R+WLGTF TA EAA AYDNAA ++ G  A  NF    G   +DS  V++ D
Sbjct:   72 KKKFRGVRQRPWGKWAAEIRCGRVKGRPERIWLGTFETAEEAALAYDNAAIQLIGPDAPTNF----GRPDVDSAVVKKQD 147          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.003e-13
Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 3
Query:  342 YRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFP 515
            YRGVR R WGK+ +EIR+P KK +R+WLGTF+T   AA+A+D AA  ++G  A+LNFP
Sbjct:   43 YRGVRMRTWGKWVSEIREPRKK-SRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFP 99          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: ERF15_ARATH (Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana GN=ERF015 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.147e-13
Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 3
Query:  321 DDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLE 521
            +D K + YRGVR+R WGK+ +EIR P K G R+WLG+++   +AA+AYD A F +RG K + NFP +
Sbjct:   20 EDRKFKCYRGVRKRSWGKWVSEIRVP-KTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFPTD 85          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: ERF35_ARATH (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF035 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.195e-12
Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = 3
Query:  315 VADDYKE-RHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFP 515
            V+DD K    YRGVR R WGK+ +EIR+P KK +R+WLGT+ TA  AA+A+D AA  ++G    LNFP
Sbjct:   61 VSDDNKNPTSYRGVRMRSWGKWVSEIREPRKK-SRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFP 127          
BLAST of DY305825 vs. ExPASy Swiss-Prot
Match: ERF08_ARATH (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana GN=ERF008 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.195e-12
Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 3
Query:  342 YRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFP 515
            Y+G+R R WGK+ AEIR+PNK+ +R+WLG++ T   AA+AYD A F +RG  A LNFP
Sbjct:   28 YKGIRMRKWGKWVAEIREPNKR-SRIWLGSYATPEAAARAYDTAVFYLRGPSARLNFP 84          
The following BLAST results are available for this feature:
BLAST of DY305825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
ABI4_ARATH4.106e-1339.37Ethylene-responsive transcription factor ABI4 OS=A... [more]
ERF84_ARATH5.362e-1342.71Ethylene-responsive transcription factor ERF084 OS... [more]
ERF42_ARATH5.362e-1350.65Ethylene-responsive transcription factor ERF042 OS... [more]
ERF21_ARATH5.362e-1362.07Ethylene-responsive transcription factor ERF021 OS... [more]
DRE1A_ARATH5.362e-1364.91Dehydration-responsive element-binding protein 1A ... [more]
ERF69_ARATH7.003e-1352.50Ethylene-responsive transcription factor ERF069 OS... [more]
ERF37_ARATH7.003e-1358.62Ethylene-responsive transcription factor ERF037 OS... [more]
ERF15_ARATH9.147e-1350.75Ethylene-responsive transcription factor ERF015 OS... [more]
ERF35_ARATH1.195e-1254.41Ethylene-responsive transcription factor ERF035 OS... [more]
ERF08_ARATH1.195e-1256.90Ethylene-responsive transcription factor ERF008 OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAM2CA01RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305825 ID=DY305825; Name=DY305825; organism=Citrus sinensis; type=EST; length=988bp
GCCACTTCCTGTTTACTCAAATTTTACAACTAATATTTTTTGAAATGGCA
GCTGGTCATCATCATCACCAAGATCATGAAGCTTTAACCTTAGAGCGCAT
AAGCCAGTACCTCCTCAATGACTTAACACCGATGGATAGCTATAGCTTCA
TCTCCAACCTCCCGCAGCAAAACCCTGCTTCCACTGATGAACAAATTTTA
GTACAAAAGACATCAAGCACTCTAAGTCAACGCAAGCCTTCTTCTATAAA
CGTAAGAATACCTCCTCCAACTACTAGCATCTTCAGGTTGAAAGATGAAG
ATAAAGATTTGGAGGTTGCTGACGATTACAAGGAAAGGCATTACAGGGGA
GTGAGGAGACGGCCGTGGGGAAAATATGCAGCTGAAATTCGTGACCCGAA
TAAAAAGGGGACCCGGGTTTGGCTTGGAACATTTAATACTGCCGTTGAAG
CTGCGAAAGCTTATGACAACGCTGCCTTTAAGATGCGTGGAAGAAAAGCC
ATACTGAATTTTCCTCTTGAAATTGGTGAGATCAGTTTGGACTCTGATGA
AGTGCAGCAAGTTGATTGTGGGAAAAAGAGGAAATATGAGGAAAACGAGG
AGTTTGAGAGAAAAGTGGCCGTGAAGAAGGAGGAAACGGTGAGTGGGTGG
TGTTGGACTANGCCCTTTGACGCCGTCAAGTTGGACCGGGTTTTGGGATG
ATGGAAATGGGATATTTAGTGTGCCGCCGTTATCTCCTTGCTTTGGCCAG
TTGGGCGTTTGCTTAATTTGGAAATATTTGACGGCAAAACACTATTTGAT
GACCTGGGAATGAATTATCCACTTGGTTAAATACTTAACCCACGAATGAA
ACTTGTTTAACCCTGCCATGCACCTAAATTTAAAATAAAAAATTGAATTT
CCCAAACAATTGGCTTTTTTTTTTTTTTTTGGAACCCATGTTTTTTAAAA
AAACTTTTTAATTATTTTATTAATTTGTTTTTTTTTTT
back to top