EY702660

Overview
NameEY702660
Unique NameEY702660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.942e-26
Identity = 51/65 (78.46%), Postives = 58/65 (89.23%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 195
            IGF+VF+VHLATIPITGTGINPARSLG A+IYNKD+ WDD WIFWVGP +GA +AA YHQ V+RA
Sbjct:  212 IGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRA 276          
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.430e-26
Identity = 49/65 (75.38%), Postives = 59/65 (90.77%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 195
            IGF+VF+VHLATIPITGTGINPARSLG A++YN ++ W D WIFWVGPF+GA +AALYHQV++RA
Sbjct:  210 IGFAVFMVHLATIPITGTGINPARSLGVAVVYNNNKAWSDQWIFWVGPFIGAAIAALYHQVILRA 274          
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.438e-25
Identity = 50/69 (72.46%), Postives = 59/69 (85.51%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 207
            IGF+VF+VHLATIPITGTGINPARS+GAA+IYN+ + WDDHWIFW GPF+GA  AA YHQ ++RA   K
Sbjct:  203 IGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYILRAAAIK 271          
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.453e-25
Identity = 50/65 (76.92%), Postives = 58/65 (89.23%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 195
            IGF+VF+VHLATIPITGTGINPARSLGAA+IYN+ + W DHWIFWVGP +GA +AA YHQ V+RA
Sbjct:  213 IGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQYVLRA 277          
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.184e-25
Identity = 48/65 (73.85%), Postives = 59/65 (90.77%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 195
            IGF+VF+VHLATIPITGTGINPARS+GAA+I+N ++ W +HWIFWVGPFVGA +AA YHQ ++RA
Sbjct:  213 IGFAVFMVHLATIPITGTGINPARSIGAAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQYILRA 277          
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.464e-25
Identity = 49/69 (71.01%), Postives = 57/69 (82.61%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 207
            IGF+VF+VHLATIPITGTGINPARS GAA+IYN ++ WDD WIFWVGP +GA  AA YHQ ++RA   K
Sbjct:  208 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFILRAAAIK 276          
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 9.321e-25
Identity = 50/69 (72.46%), Postives = 58/69 (84.06%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 207
            IGF+VF+VHLATIPITGTGINPARS GAA+IYN ++ WDD WIFWVGPF+GA  AA YHQ ++RA   K
Sbjct:  201 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFLGALAAAAYHQYILRASAIK 269          
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.217e-24
Identity = 47/69 (68.12%), Postives = 58/69 (84.06%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 207
            IGF+VF+VHLATIP+TGTGINPARS G A+I+N D+ WDD WI+WVGPFVGA +AA+YHQ ++R    K
Sbjct:  210 IGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFVGAAVAAIYHQYILRGSAIK 278          
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 1.031e-23
Identity = 48/64 (75.00%), Postives = 57/64 (89.06%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIR 192
            IGF+VF+VHLATIPITGTGINPARSLGAA++YN+   W DHWIFWVGP +GA LAA YH++V+R
Sbjct:  210 IGFAVFVVHLATIPITGTGINPARSLGAAVLYNQHAAWKDHWIFWVGPVIGAFLAAAYHKLVLR 273          
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.081e-16
Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAII--YNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 207
            IG +V +VHLATIPITGTGINPARSLG A++      + W   WIFWVGPF GA  A +YH  ++R    K
Sbjct:  198 IGLAVLVVHLATIPITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAGAAAAMIYHHYILRGAAAK 268          
The following BLAST results are available for this feature:
BLAST of EY702660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
PIP22_ORYSJ4.942e-2678.46Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP24_ORYSJ8.430e-2675.38Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP26_ORYSJ1.438e-2572.46Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP23_ORYSJ2.453e-2576.92Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP21_ORYSJ4.184e-2573.85Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP24_ARATH5.464e-2571.01Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP27_ARATH9.321e-2572.46Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP27_MAIZE1.217e-2468.12Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP27_ORYSJ1.031e-2375.00Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP28_ORYSJ2.081e-1656.34Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-010-F10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702660 ID=EY702660; Name=EY702660; organism=Citrus sinensis; type=EST; length=913bp
ATTGGGTTCTCTGTGTTTTTGGTTCACTTGGCCACTATCCCAATTACCGG
AACTGGCATCAACCCAGCGAGGAGTCTTGGAGCTGCAATCATCTACAACA
AGGACCGCGGTTGGGATGACCACTGGATTTTCTGGGTGGGACCATTCGTT
GGAGCTGGACTCGCAGCTTTGTACCACCAAGTCGTGATCAGAGCCATTCC
CTTCAAATGAAGCTGATCGCTTCATCAACGTTCGTGATTGCACCTGCATT
TGTTTATGGCTGTTGCTGGCTTGCTTATGTGTATTATAAAATATTAATTA
GTCCTTTGTTCAAATCTGCTGGTGCTGGACCTGGGCCTGCTTCTCTGATT
TCCTTCCTTAAAACGTTTTTTTTTTTTTTTTAATTTTGAAGAGAGGTGGA
TGATGATGACCGATGGGCCCATGGTTAAATAGGTGGGCGCTGTCACTTTG
TACATTTGTATGGCTATGGATTTGTGCAATGCCATCTTGGTTATAATATG
GACAAAACTACTTCTATTTCCAAAATCAATACCCCCCTTATGCTCGGGCC
GCCGATCTAAAGGATCCAAGCCTTTCCTTACCCGATCATGAAACCCTCAT
ACCTTCTCTATTAGGGCCCCTAACTCTCATTTCCTGGCCGGCCTTTTTAA
AACCGCGGGGCCTGGGAAAACCCCTGAGGTTCCCCCAATTATTCCCCCTC
GAACCCCCTCCCCCCTTCTCCCACCTGGCGCTATTAACCAACAAGGCCCC
CCCCGATTCGCCCCCCCCAACAGTTCCCGCATCCTTTCATGGCACATTGT
GAACCCCCCCTTGTTTCGGTCTAATAATCCGCCGATGGGGTGGGTGGTTA
CCACACAGTGTTCAACCCTTTCTTTTCTCCTGCCCCTTCCCCCCGCTTCT
TCCCCTTTTCTCT
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