EY702660

Overview
NameEY702660
Unique NameEY702660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 8.184e-13
Identity = 35/63 (55.56%), Postives = 44/63 (69.84%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 189
            IGFSV L HL  I  TG GINPARS G+++I +    + DHWIFWVGPF+GA LA L +  ++
Sbjct:  175 IGFSVALGHLLAIDYTGCGINPARSFGSSVITHN---FQDHWIFWVGPFIGAALAVLIYDFIL 234          
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 8.184e-13
Identity = 35/63 (55.56%), Postives = 44/63 (69.84%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 189
            IGFSV L HL  I  TG GINPARS G+++I +    + DHWIFWVGPF+GA LA L +  ++
Sbjct:  174 IGFSVALGHLLAIDYTGCGINPARSFGSSVITHN---FQDHWIFWVGPFIGAALAVLIYDFIL 233          
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 1.396e-12
Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 189
            IGFSV L HL  I  TG GINPARS G+A+I      + DHW+FWVGPF+G  LA L +  ++
Sbjct:  174 IGFSVALGHLLAIDYTGCGINPARSFGSAVI---THNFQDHWVFWVGPFIGGALAVLIYDFIL 233          
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 71.633 bits (174), Expect = 6.928e-12
Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 189
            IG SV L HL  I  TG GINPARS G+A++    R + +HWIFWVGPF+G+ LA L +  ++
Sbjct:  172 IGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIGSALAVLIYDFIL 231          
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 9.049e-12
Identity = 33/63 (52.38%), Postives = 42/63 (66.67%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 189
            IG SV L HL  I  TG GINPARS G+A++    R + +HWIFWVGPF+G  LA L +  ++
Sbjct:  172 IGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 1.543e-11
Identity = 33/63 (52.38%), Postives = 42/63 (66.67%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 189
            IG SV L HL  I  TG GINPARS G+++I +    + DHWIFWVGPF+G  LA L +  ++
Sbjct:  174 IGLSVALGHLLAIDYTGCGINPARSFGSSVITHN---FKDHWIFWVGPFIGGALAVLIYDFIL 233          
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 2.016e-11
Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 189
            IG SV L HL  I  TG GINPARS G+A+I      + +HWIFWVGPF+G  LA L +  ++
Sbjct:  172 IGLSVALGHLLAIDYTGCGINPARSFGSAVI---THNFSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 2.016e-11
Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 189
            IG SV L HL  I  TG GINPARS G+A+I      + +HWIFWVGPF+G  LA L +  ++
Sbjct:  172 IGLSVALGHLLAIDYTGCGINPARSFGSAVI---THNFSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.439e-11
Identity = 31/63 (49.21%), Postives = 43/63 (68.25%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 189
            +GFS+ L HL  IP TG G+NPARS   A+I    R + +HW+FW GP +GA LAAL +++ +
Sbjct:  164 VGFSLALGHLFGIPFTGAGMNPARSFAPAVI---TRNFTNHWVFWAGPLLGAALAALLYELAL 223          
BLAST of EY702660 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.491e-11
Identity = 30/64 (46.88%), Postives = 42/64 (65.62%), Query Frame = 1
Query:    1 IGFSVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIR 192
            +G S+   HL  I +TG  +NPARS G A++ N    W DHW++WVGP VGA +AAL ++ V +
Sbjct:  178 VGLSIAAGHLCAIKLTGASMNPARSFGPAVVQNM---WIDHWVYWVGPIVGAIVAALLYKFVFK 238          
The following BLAST results are available for this feature:
BLAST of EY702660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
AQP1_SHEEP8.184e-1355.56Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_BOVIN8.184e-1355.56Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_PIG1.396e-1253.97Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_RAT6.928e-1252.38Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_MOUSE9.049e-1252.38Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_CANFA1.543e-1152.38Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_PONAB2.016e-1152.38Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_HUMAN2.016e-1152.38Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
MIP_CHICK3.439e-1149.21Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP_HAEIX4.491e-1146.88Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-010-F10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702660 ID=EY702660; Name=EY702660; organism=Citrus sinensis; type=EST; length=913bp
ATTGGGTTCTCTGTGTTTTTGGTTCACTTGGCCACTATCCCAATTACCGG
AACTGGCATCAACCCAGCGAGGAGTCTTGGAGCTGCAATCATCTACAACA
AGGACCGCGGTTGGGATGACCACTGGATTTTCTGGGTGGGACCATTCGTT
GGAGCTGGACTCGCAGCTTTGTACCACCAAGTCGTGATCAGAGCCATTCC
CTTCAAATGAAGCTGATCGCTTCATCAACGTTCGTGATTGCACCTGCATT
TGTTTATGGCTGTTGCTGGCTTGCTTATGTGTATTATAAAATATTAATTA
GTCCTTTGTTCAAATCTGCTGGTGCTGGACCTGGGCCTGCTTCTCTGATT
TCCTTCCTTAAAACGTTTTTTTTTTTTTTTTAATTTTGAAGAGAGGTGGA
TGATGATGACCGATGGGCCCATGGTTAAATAGGTGGGCGCTGTCACTTTG
TACATTTGTATGGCTATGGATTTGTGCAATGCCATCTTGGTTATAATATG
GACAAAACTACTTCTATTTCCAAAATCAATACCCCCCTTATGCTCGGGCC
GCCGATCTAAAGGATCCAAGCCTTTCCTTACCCGATCATGAAACCCTCAT
ACCTTCTCTATTAGGGCCCCTAACTCTCATTTCCTGGCCGGCCTTTTTAA
AACCGCGGGGCCTGGGAAAACCCCTGAGGTTCCCCCAATTATTCCCCCTC
GAACCCCCTCCCCCCTTCTCCCACCTGGCGCTATTAACCAACAAGGCCCC
CCCCGATTCGCCCCCCCCAACAGTTCCCGCATCCTTTCATGGCACATTGT
GAACCCCCCCTTGTTTCGGTCTAATAATCCGCCGATGGGGTGGGTGGTTA
CCACACAGTGTTCAACCCTTTCTTTTCTCCTGCCCCTTCCCCCCGCTTCT
TCCCCTTTTCTCT
back to top