DY305813

Overview
NameDY305813
Unique NameDY305813
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1271
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY305813 vs. ExPASy Swiss-Prot
Match: SAR1_ASPCL (Small COPII coat GTPase sar1 OS=Aspergillus clavatus GN=sar1 PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 4.405e-53
Identity = 108/192 (56.25%), Postives = 130/192 (67.71%), Query Frame = 1 
Query:  112 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 687
            M++++WFY VLASLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK              VPFL+LGNKID P A SE+ELR+ LGL   TTGKGKV L    +RP+EVFMCS+V + GYG+G +WLSQY+
Sbjct:    1 MWIINWFYDVLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVATLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELSKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189
[Close]
BLAST of DY305813 vs. ExPASy Swiss-Prot
Match: SAR1_ASPOR (Small COPII coat GTPase sar1 OS=Aspergillus oryzae GN=sar1 PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 5.754e-53
Identity = 108/192 (56.25%), Postives = 130/192 (67.71%), Query Frame = 1 
Query:  112 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 687
            M++++WFY VLASLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK              VPFL+LGNKID P A SE+ELR+ LGL   TTGKGKV L    +RP+EVFMCS+V + GYG+G +WLSQY+
Sbjct:    1 MWIINWFYDVLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAVLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189
[Close]
BLAST of DY305813 vs. ExPASy Swiss-Prot
Match: SAR1_ASPFU (Small COPII coat GTPase sar1 OS=Aspergillus fumigatus GN=sar1 PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 5.754e-53
Identity = 107/192 (55.73%), Postives = 130/192 (67.71%), Query Frame = 1 
Query:  112 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 687
            M++++WFY +LASLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK              VPFL+LGNKID P A SE+ELR+ LGL   TTGKGKV L    +RP+EVFMCS+V + GYG+G +WLSQY+
Sbjct:    1 MWIINWFYDILASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVATLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189
[Close]
BLAST of DY305813 vs. ExPASy Swiss-Prot
Match: SAR1_DEBHA (Small COPII coat GTPase SAR1 OS=Debaryomyces hansenii GN=SAR1 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 7.514e-53
Identity = 111/192 (57.81%), Postives = 127/192 (66.15%), Query Frame = 1 
Query:  112 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 687
            M+L DWF  VLASLGLW K AK+LFLGLDNAGKTTLLHMLK++RL   QPT +PTSEEL+IG ++F  FDLGGHQ ARR+W                   ERFAESK             +VPFL+LGNKID   A  E EL+  LGL N TTGK    L +   RP+EVFM S+V +MGYGDGFKWLSQYI
Sbjct:    1 MWLFDWFQDVLASLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELASVPFLILGNKIDASSAVGEMELKSALGLYN-TTGKDTGKLPEGQ-RPIEVFMVSVVMRMGYGDGFKWLSQYI 190
[Close]
BLAST of DY305813 vs. ExPASy Swiss-Prot
Match: SAR1_ASPTN (Small COPII coat GTPase sar1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sar1 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 9.814e-53
Identity = 107/192 (55.73%), Postives = 130/192 (67.71%), Query Frame = 1 
Query:  112 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 687
            M++++WFY +LASLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK              VPFL+LGNKID P A SE+ELR+ LGL   TTGKGKV L    +RP+EVFMCS+V + GYG+G +WLSQY+
Sbjct:    1 MWIINWFYDILASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDYERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189
[Close]
BLAST of DY305813 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNC (Small COPII coat GTPase SAR1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sar1 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 9.814e-53
Identity = 108/192 (56.25%), Postives = 130/192 (67.71%), Query Frame = 1 
Query:  112 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 687
            M+L++WFY +LASLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK              VPFL+LGNKID P A SE+ELR+ LGL   TTGKGKV L    +RP+EVFMCS+V + GYG+G +WLSQY+
Sbjct:    1 MWLINWFYDLLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189
[Close]
BLAST of DY305813 vs. ExPASy Swiss-Prot
Match: SAR1_PICST (Small COPII coat GTPase SAR1 OS=Pichia stipitis GN=SAR1 PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.674e-52
Identity = 108/192 (56.25%), Postives = 129/192 (67.19%), Query Frame = 1 
Query:  112 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 687
            M+L DWF  VL+SLGLW K AK+LFLGLDNAGKTTLLHMLK++RL   QPT +PTSEEL+IG ++F  FDLGGHQ ARR+W                   ERFAESK             +VPFL+LGNKID+P A  E EL+  LGL N TTGK    L + + RP+EV+M S+V + GYG+GFKWLSQYI
Sbjct:    1 MWLFDWFQDVLSSLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELSHVPFLILGNKIDVPTAVGEMELKSALGLYN-TTGKDTGKLPEGS-RPIEVYMVSVVMRSGYGEGFKWLSQYI 190
[Close]
BLAST of DY305813 vs. ExPASy Swiss-Prot
Match: SAR1_MAGGR (Small COPII coat GTPase SAR1 OS=Magnaporthe grisea GN=SAR1 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 2.186e-52
Identity = 105/192 (54.69%), Postives = 131/192 (68.23%), Query Frame = 1 
Query:  112 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 687
            M++++WFY VL+SLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEEL+IG ++F  FDLGGHQ ARR+W                   +RF E+K              VPF++LGNKID P A SEEELR+ LGL   TTGKGKV L    +RP+EVFMCS+V + GYG+G +WLSQY+
Sbjct:    1 MWIINWFYDVLSSLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHDRFPEAKAELDALLSMEELAKVPFVILGNKIDHPEAISEEELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189
[Close]
BLAST of DY305813 vs. ExPASy Swiss-Prot
Match: SAR1_TRIRE (Small COPII coat GTPase sar1 OS=Trichoderma reesei GN=sar1 PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 4.871e-52
Identity = 103/192 (53.65%), Postives = 130/192 (67.71%), Query Frame = 1 
Query:  112 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 687
            M++++WFY VL+SLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT +PTSEEL+IG ++F  FDLGGHQ ARR+W                   ERF E+K              VPF++LGNKID P A SE+ELR+ LGL   TTGKG+V L    +RP+E+FMCS+V + GYGDG +WLS Y+
Sbjct:    1 MWIVNWFYDVLSSLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELAIGNVRFNTFDLGGHQQARRIWRDYFPDVNGVVFLVDAKDHERFPEAKAELDALLSMEELSKVPFVILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGRVQL--EGIRPIELFMCSVVMRQGYGDGIRWLSNYV 189
[Close]
BLAST of DY305813 vs. ExPASy Swiss-Prot
Match: SAR1_LODEL (Small COPII coat GTPase SAR1 OS=Lodderomyces elongisporus GN=SAR1 PE=3 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 4.871e-52
Identity = 107/192 (55.73%), Postives = 126/192 (65.62%), Query Frame = 1 
Query:  112 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 687
            M++ DWF  +LASLGLW K AK+LFLGLDNAGKTTLLHMLK++RL   QPT +PTSEEL+IG ++F  FDLGGHQ ARR+W                   ERFAESK              VPF++LGNKID+P A  E EL+  LGL N TTGK    L +   RP+EVFM S+V + GYGD FKWLSQYI
Sbjct:    1 MWIFDWFQDILASLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADSERFAESKAELESLFKIEELSQVPFVILGNKIDVPTAVGEMELKNALGLYN-TTGKDTGKLPEGQ-RPIEVFMVSVVMRSGYGDAFKWLSQYI 190
The following BLAST results are available for this feature:
BLAST of DY305813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
SAR1_ASPCL4.405e-5356.25Small COPII coat GTPase sar1 OS=Aspergillus clavat... [more]
SAR1_ASPOR5.754e-5356.25Small COPII coat GTPase sar1 OS=Aspergillus oryzae... [more]
SAR1_ASPFU5.754e-5355.73Small COPII coat GTPase sar1 OS=Aspergillus fumiga... [more]
SAR1_DEBHA7.514e-5357.81Small COPII coat GTPase SAR1 OS=Debaryomyces hanse... [more]
SAR1_ASPTN9.814e-5355.73Small COPII coat GTPase sar1 OS=Aspergillus terreu... [more]
SAR1_ASPNC9.814e-5356.25Small COPII coat GTPase SAR1 OS=Aspergillus niger ... [more]
SAR1_PICST1.674e-5256.25Small COPII coat GTPase SAR1 OS=Pichia stipitis GN... [more]
SAR1_MAGGR2.186e-5254.69Small COPII coat GTPase SAR1 OS=Magnaporthe grisea... [more]
SAR1_TRIRE4.871e-5253.65Small COPII coat GTPase sar1 OS=Trichoderma reesei... [more]
SAR1_LODEL4.871e-5255.73Small COPII coat GTPase SAR1 OS=Lodderomyces elong... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2BG11RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305813 ID=DY305813; Name=DY305813; organism=Citrus sinensis; type=EST; length=1271bp
CAAATCGAAACAGAGGCCTTGAATTGGACGATCTGATTCGTTCTCAGCCT
TAGATCGTCGTAAATTCAAGCTCGATCCGTTTTCGTTTCTAATTTGTCTA
CCGATAAAGCCATGTTTCTCCTCGACTGGTTCTACGGCGTGCTGGCCTCC
CTCGGTCTTTGGCAGAAAGAGGCCAAGATCTTGTTTTTAGGGCTTGATAA
TGCTGGAAAAACAACGTTGCTTCACATGTTGAAAGATGAGAGATTGGTTC
AACATCAGCCAACACAGTATCCCACATCGGAAGAGCTTAGTATTGGGAAA
ATTAAGTTCAAGGCGTTTGATTTGGGAGGCCATCAGATTGCTAGGAGAGT
CTGGAAGGATTACTATGCGAAGGTTGATGCTGTGGTATACCTAGTGGATG
CCTATGACAAAGAGAGGTTTGCAGAATCAAAGAAAGAACTGGATGCACTC
CTTTCTGATGAGGCATTGGCCAATGTTCCTTTTCTTGTGTTAGGAAACAA
GATTGACATCCCTTATGCTGCTTCTGAGGAAGAGTTGCGTTACCACCTTG
GCCTATCAAATTTCACCACTGGGAAGGGGAAGGTTAATCTAGCGGACTCA
AATGTCCGTCCACTGGAGGTGTTTATGTGTAGCATAGTTCGCAAAATGGG
ATATGGTGATGGTTTCAAATGGCTCTCTCAATACATTAAGTAGGCCAGTG
TCAACACTTCTGGAGGTTCCAGCACGCAGACTACGTGGGGTGGCAGCGGT
GGATGCAATCCGGGCACTTATCAAGCAATGCGTTTACTGGGATAAAGTTT
AATAACGCAAAATTCGGCAAAAGTCCGCAGCACCCCAGGACCCATAATGG
CTATTTTGACTCGATAATGAAGCGGAAATGGCTTTGGGCTTTTGGTTACA
CGTGGTGATAAATAACCGAATCTTTCCTTTGCCCGACTTTAGCTTTCAAA
ATTTTTAAGCCCACCACCCCACCTTAAATTGTGTTTTTTAAATTTTTAAA
AAAAAAAAAAAAAAAAAATCCCGGGGGGGGGGCCCGGGGCCCCAAATCTC
CCCCTTATGGGTAGGCGATATAAAATTTCCCTGGGGCCCCCTTTTTATAA
AACCGGGGAGAGGGGGAAAAAAACCCGGTGGGGTTACCCCCCATATAAAT
ACGCCCCTTGGGGTGCCAAAAACTCGCCCGGCCGCCGTCCCCGGCGGTGT
TGGGGGGGGAAAAGGTAGTAAGTGGAGGTACGCCCCCCCGCCGGGCAGTT
GTGTTGCCTTCGCCTTTCTGC
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