DY305804

Overview
NameDY305804
Unique NameDY305804
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1192
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: TPC_MACFA (Mitochondrial thiamine pyrophosphate carrier OS=Macaca fascicularis GN=SLC25A19 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.077e-13
Identity = 57/172 (33.14%), Postives = 82/172 (47.67%), Query Frame = 3
Query:  306 GTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVN---QQIICGAGAGVAVSFLACPTELIKCRLQA---QSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVP 803
            G +      +  HP D ++ +  +Q     G+P  Y     AV     +EGP+  YKG+   L  +  +  L F+    ++ L +    A    N   Q ++CG+GAGV    L  P +L K RLQ    + A A  GQV    +Y G +D AK+VL+ EG L G FKGL P
Sbjct:  125 GGLAACTATLTVHPVDVLRTRFAAQ-----GEPKVYNTLRHAVGTMYRSEGPQVFYKGLAPTLIAIFPYAGLQFSCYSSLKHLYKWAMPAEGKKNENLQNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFEHARAAFGQVR---RYKGLMDCAKQVLQKEGAL-GFFKGLSP 287          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: MCP62_MOUSE (Putative mitochondrial carrier protein FLJ44862 homolog OS=Mus musculus PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 1.406e-13
Identity = 52/178 (29.21%), Postives = 84/178 (47.19%), Query Frame = 3
Query:  291 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRS------QPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGV----AVKYGGPVDVAKRVLRSEGGLRGLFKG 794
            +D  +G +GG A +I G+P DT+K +LQ+           YA   + ++     E   G +KGM  PLA++A +N+++F V    +  L        + G   +++  ++     GV    L  P ELIK RLQ Q+        G+       Y GPV     +++ E GL GL++G
Sbjct:    7 EDFVAGWIGGVASVIVGYPLDTVKTRLQAGVG--------YANTFNCIRMVYKRERVFGFFKGMSFPLASIAIYNSVVFGVFSNTQRFLSKYRCGELEAGPGRSLSDLLLASMLTGVVSVGLGGPVELIKIRLQMQTQPFREASHGLKSRAVAAYQGPVHCIATIVQME-GLTGLYRG 175          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: TPC_PONAB (Mitochondrial thiamine pyrophosphate carrier OS=Pongo abelii GN=SLC25A19 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.837e-13
Identity = 56/160 (35.00%), Postives = 79/160 (49.38%), Query Frame = 3
Query:  342 HPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVN---QQIICGAGAGVAVSFLACPTELIKCRLQA---QSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVP 803
            HP D ++ +  +Q     G+P  Y     AV     +EGP+  YKG+   L  +  +  L F+    ++ L +    A    N   Q ++CG+GAGV    L  P +L K RLQ    + A A  GQV    +Y G +D AK+VL+ EG L G FKGL P
Sbjct:  137 HPVDVLRTRFAAQ-----GEPKVYNTLCHAVGTMYRSEGPQVFYKGLAPTLIAIFPYAGLQFSCYSSLKHLYKWAIPAEGKKNENLQNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFEHARAAFGQVR---RYKGLMDCAKQVLQKEGAL-GFFKGLSP 287          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: TPC_HUMAN (Mitochondrial thiamine pyrophosphate carrier OS=Homo sapiens GN=SLC25A19 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.837e-13
Identity = 56/160 (35.00%), Postives = 79/160 (49.38%), Query Frame = 3
Query:  342 HPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVN---QQIICGAGAGVAVSFLACPTELIKCRLQA---QSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVP 803
            HP D ++ +  +Q     G+P  Y     AV     +EGP+  YKG+   L  +  +  L F+    ++ L +    A    N   Q ++CG+GAGV    L  P +L K RLQ    + A A  GQV    +Y G +D AK+VL+ EG L G FKGL P
Sbjct:  137 HPVDVLRTRFAAQ-----GEPKVYNTLRHAVGTMYRSEGPQVFYKGLAPTLIAIFPYAGLQFSCYSSLKHLYKWAIPAEGKKNENLQNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFEHARAAFGQVR---RYKGLMDCAKQVLQKEGAL-GFFKGLSP 287          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: UCP1_CANFA (Mitochondrial brown fat uncoupling protein 1 OS=Canis familiaris GN=UCP1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 6.980e-13
Identity = 61/183 (33.33%), Postives = 82/183 (44.81%), Query Frame = 3
Query:  279 GDIAKDLFSGTVGGAAQLIC-----GHPFDTIKVKLQSQPAPLPGQPPK---YAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVP 803
            G  A    S  +  AA   C       P DT KV+LQ Q     GQPP+   Y G +  V      EG + LY G+ A L     F +L   +   +   L    GA  ++  +I  G   G A  F+  PTE++K RLQAQS L G        +Y G  + A R++ +  GL GL+KG  P
Sbjct:    6 GSDAPPTLSVRIAAAAGAACLADMITFPLDTAKVRLQIQGEG-QGQPPRAPRYRGVLGTVATLARTEGLQKLYSGLPAGLQRQVGFASLRIGLYDSVREWLSPGQGAAASLGSRISAGVMTGGAAVFIGQPTEVVKVRLQAQSHLHGR-----KPRYTGTYN-AYRIIATTEGLTGLWKGTTP 181          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: HDMCP_MOUSE (Hepatocellular carcinoma down-regulated mitochondrial carrier homolog OS=Mus musculus GN=Hdmcp PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 6.980e-13
Identity = 59/191 (30.89%), Postives = 87/191 (45.55%), Query Frame = 3
Query:  294 DLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLF-TVRGQMEALLRSQPG---APLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQ----------SALAGSGQVGVA----------VKYGGPVDVAKRVLRSEGGLRGLFKG 794
            D  +G +GG   +  G+P DT+KV++Q++         KYAG    ++ T   E   G Y+G+  P+ TV+  +++ F T    +  + R + G   A  T     + G  +G+   FL  PTE+ K RLQ Q          SA   SG   +            KY GP+     V R E GLRGL+KG
Sbjct:    2 DFVAGAIGGVCGVAVGYPLDTVKVRIQTE--------AKYAGIWHCIRDTYRQERVWGFYRGLSLPVCTVSLVSSVSFGTYHHCLAHICRFRYGSTDAKPTKADITLSGCASGLVRVFLTSPTEVAKVRLQTQTQAQTQQRRSSASWTSGAPALCPTPTACLEPRPKYSGPLHCLVTVAREE-GLRGLYKG 183          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: ODC2_YEAST (Mitochondrial 2-oxodicarboxylate carrier 2 OS=Saccharomyces cerevisiae GN=ODC2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.191e-12
Identity = 50/171 (29.24%), Postives = 83/171 (48.54%), Query Frame = 3
Query:  303 SGTVGGAAQLICGHPFDTIKVKLQSQ-----PAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQ-QIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGL 797
            SG V G ++L   +P D +K + Q +      A +  Q  +Y G +D +K+ +  EG   LY+G+ +P+   A   A  F    Q + + ++      T  +  I  GA AG+  + +  P ELIK R+Q            V   Y GP+D  K+ +++E G+ GL+KG+
Sbjct:   18 SGAVAGISELTVMYPLDVVKTRFQLEVTTPTAAAVGKQVERYNGVIDCLKKIVKKEGFSRLYRGISSPMLMEAPKRATKFACNDQYQKIFKNLFNTNETTQKISIAAGASAGMTEAAVIVPFELIKIRMQ-----------DVKSSYLGPMDCLKKTIKNE-GIMGLYKGI 176          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: UCP3_BOVIN (Mitochondrial uncoupling protein 3 OS=Bos taurus GN=UCP3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.031e-12
Identity = 52/174 (29.89%), Postives = 83/174 (47.70%), Query Frame = 3
Query:  291 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQ---PAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVP 803
            K L +GT    A L+   P DT KV+LQ Q    A L  +  +Y G +  +   +  EGPR LY G+ A L    +F ++   +   ++     +     ++  +I+ G   G      A PT+++K R QA         +G   KY G +D  + + R E G+RGL+KG++P
Sbjct:   16 KFLAAGTAACFADLLT-FPLDTAKVRLQIQGENQAALAARSAQYRGVLGTILTMVRTEGPRSLYSGLVAGLQRQMSFASIRIGLYDSVKQFYTPKGSDHSSIITRILAGCTTGAMAVTCAQPTDVVKIRFQASMHTG----LGGNRKYSGTMDAYRTIAREE-GVRGLWKGILP 183          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: TPC_BOVIN (Mitochondrial thiamine pyrophosphate carrier OS=Bos taurus GN=SLC25A19 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.652e-12
Identity = 51/177 (28.81%), Postives = 74/177 (41.81%), Query Frame = 3
Query:  282 DIAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVN---QQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVP 803
            D +     G +      +  HP D ++ +  +Q     G+P  Y    DAV      EGP   YKG+   L  +  +    F++   ++        A    N   + ++CG+GAGV    L  P +L K RLQ           G    Y G +D A +VLR EG  +G FKGL P
Sbjct:  117 DFSVHFLCGGLSACVATLAVHPVDVLRTRFAAQ-----GEPRVYKTLRDAVVTMYRTEGPLVFYKGLNPTLIAIFPYAGFQFSIYSSLKRAYEWALPAEGKKNGNFKNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFEQARASFGQVRSYKGLLDCAGQVLREEGA-QGCFKGLSP 287          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: ORT1_YEAST (Mitochondrial ornithine carrier protein OS=Saccharomyces cerevisiae GN=ORT1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.652e-12
Identity = 50/168 (29.76%), Postives = 80/168 (47.62%), Query Frame = 3
Query:  294 DLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEG-PRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKG 794
            D+ +G++ GA   +   PFDT+KV+LQ+Q + +      +      +K T   EG  RG ++G+ +PL      NA LF    Q    L         + Q +I G  AG   S +  P EL+KC+LQ  +    S +     K+   +   K ++ +E GL GL++G
Sbjct:   16 DIINGSIAGACGKVIEFPFDTVKVRLQTQASNV------FPTTWSCIKFTYQNEGIARGFFQGIASPLVGACLENATLFVSYNQCSKFLEKHTNV-FPLGQILISGGVAGSCASLVLTPVELVKCKLQVANLQVASAK----TKHTKVLPTIKAII-TERGLAGLWQG 171          
The following BLAST results are available for this feature:
BLAST of DY305804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
TPC_MACFA1.077e-1333.14Mitochondrial thiamine pyrophosphate carrier OS=Ma... [more]
MCP62_MOUSE1.406e-1329.21Putative mitochondrial carrier protein FLJ44862 ho... [more]
TPC_PONAB1.837e-1335.00Mitochondrial thiamine pyrophosphate carrier OS=Po... [more]
TPC_HUMAN1.837e-1335.00Mitochondrial thiamine pyrophosphate carrier OS=Ho... [more]
UCP1_CANFA6.980e-1333.33Mitochondrial brown fat uncoupling protein 1 OS=Ca... [more]
HDMCP_MOUSE6.980e-1330.89Hepatocellular carcinoma down-regulated mitochondr... [more]
ODC2_YEAST1.191e-1229.24Mitochondrial 2-oxodicarboxylate carrier 2 OS=Sacc... [more]
UCP3_BOVIN2.031e-1229.89Mitochondrial uncoupling protein 3 OS=Bos taurus G... [more]
TPC_BOVIN2.652e-1228.81Mitochondrial thiamine pyrophosphate carrier OS=Bo... [more]
ORT1_YEAST2.652e-1229.76Mitochondrial ornithine carrier protein OS=Sacchar... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2BF08RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305804 ID=DY305804; Name=DY305804; organism=Citrus sinensis; type=EST; length=1192bp
GCCCATTACCTACCTCCTTCCTTTTTAGTACCTTTTTTTTCTATTGTCAT
TCCTTTTTTTCTCTCATTAAAAAAGTAAACCCGGAAGAAAAAATAAGAAA
AATTAAACCCAGTTCCTTTTTCCTGGCGTATTTTTAATTTGTATACCCTC
CTTTTAATCTAATACTTTGTGTTTTCTCAAATTGAATCATTTGAGGGAAA
CAACTTTTCTCCACTTAGATTCGGTTGCCGTTCTCGGGGCTCTGCTTACT
CCGGTGCCAGTGAGAATCGGCTCTGATGGGAGACATAGCCAAGGATCTAT
TTTCTGGGACTGTTGGAGGGGCAGCACAATTAATATGTGGGCACCCATTT
GATACCATCAAGGTCAAGCTTCAAAGCCAGCCTGCTCCACTCCCTGGCCA
ACCTCCCAAGTATGCTGGTGCCATGGATGCTGTCAAGCAAACCATAGCTG
CCGAAGGGCCAAGGGGCTTGTACAAAGGTATGGGAGCTCCACTAGCTACT
GTTGCCGCTTTTAATGCCCTCCTATTTACAGTGAGAGGACAAATGGAGGC
ACTGCTCAGATCTCAACCTGGTGCCCCACTAACCGTCAACCAGCAGATTA
TTTGCGGGGCTGGGGCTGGTGTTGCTGTTTCTTTTCTTGCTTGCCCCACA
GAATTGATCAAATGCAGGTTGCAAGCCCAAAGTGCATTAGCAGGTTCTGG
CCAAGTTGGTGTGGCAGTGAAGTATGGTGGACCAGTGGATGTGGCTAAGC
GTGTTCTTAGATCAGAAGGCGGTCTTAGGGGTCTCTTCAAGGGCCTGGTC
CCACAATGGCACGTGAGGTTCAAGGGATGCTGCCATGGTTTGGTGTGTAT
GGAATGGGTGAAAAAGTAAATGGCAGGAAGCCAAGACACCTCCCCATTGG
GAAAAAGGAACAGTGTTTTTGGGAGGTGGTTAATCTGGGAGCTTGTTTCC
GGGTTCCCTGGTTACCCCCCTGAAGTTTTTCAAGAGGGGTTTTTCGGGGT
GAATAAATTACAAAATCCCCCAATTCCTCTGGGTTCCTTTGAAGCCCTTT
CAAAAAAATCCCGAAAAACCAAAAGGGGTCGCAAGGGTTTGGTAAAAGGG
GTTTCCCCCCCCGGCCCCGGGGGCCCAAAAAAGGTTTTCCCGCGGCAAAA
GGCGCGCGAGGGTTTCTCCTTTGGGGCCGTAAAAAGAAAGGT
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