DY305804

Overview
NameDY305804
Unique NameDY305804
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1192
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: UCP2_PIG (Mitochondrial uncoupling protein 2 OS=Sus scrofa GN=UCP2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.533e-11
Identity = 56/175 (32.00%), Postives = 85/175 (48.57%), Query Frame = 3 
Query:  291 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQP---APLPGQPP-KYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVP 803
            K L +GT    A LI   P DT KV+LQ Q     P+      +Y G +  +   +  EGPR LY G+ A L    +F ++   +   ++    ++      +  +++ G+  G     +A PT+++K R QAQ A AG G+     +Y   VD  K + R E GLRGL+KG  P
Sbjct:   16 KFLGAGTAACIADLIT-FPLDTAKVRLQIQGERRGPVQAAASAQYRGVLGTILTMVRNEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKHFY-TKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQ-ARAGGGR-----RYRSTVDAYKTIAREE-GLRGLWKGTSP 181
The following BLAST results are available for this feature:
BLAST of DY305804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
UCP2_PIG6.533e-1132.00Mitochondrial uncoupling protein 2 OS=Sus scrofa G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2BF08RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305804 ID=DY305804; Name=DY305804; organism=Citrus sinensis; type=EST; length=1192bp
GCCCATTACCTACCTCCTTCCTTTTTAGTACCTTTTTTTTCTATTGTCAT
TCCTTTTTTTCTCTCATTAAAAAAGTAAACCCGGAAGAAAAAATAAGAAA
AATTAAACCCAGTTCCTTTTTCCTGGCGTATTTTTAATTTGTATACCCTC
CTTTTAATCTAATACTTTGTGTTTTCTCAAATTGAATCATTTGAGGGAAA
CAACTTTTCTCCACTTAGATTCGGTTGCCGTTCTCGGGGCTCTGCTTACT
CCGGTGCCAGTGAGAATCGGCTCTGATGGGAGACATAGCCAAGGATCTAT
TTTCTGGGACTGTTGGAGGGGCAGCACAATTAATATGTGGGCACCCATTT
GATACCATCAAGGTCAAGCTTCAAAGCCAGCCTGCTCCACTCCCTGGCCA
ACCTCCCAAGTATGCTGGTGCCATGGATGCTGTCAAGCAAACCATAGCTG
CCGAAGGGCCAAGGGGCTTGTACAAAGGTATGGGAGCTCCACTAGCTACT
GTTGCCGCTTTTAATGCCCTCCTATTTACAGTGAGAGGACAAATGGAGGC
ACTGCTCAGATCTCAACCTGGTGCCCCACTAACCGTCAACCAGCAGATTA
TTTGCGGGGCTGGGGCTGGTGTTGCTGTTTCTTTTCTTGCTTGCCCCACA
GAATTGATCAAATGCAGGTTGCAAGCCCAAAGTGCATTAGCAGGTTCTGG
CCAAGTTGGTGTGGCAGTGAAGTATGGTGGACCAGTGGATGTGGCTAAGC
GTGTTCTTAGATCAGAAGGCGGTCTTAGGGGTCTCTTCAAGGGCCTGGTC
CCACAATGGCACGTGAGGTTCAAGGGATGCTGCCATGGTTTGGTGTGTAT
GGAATGGGTGAAAAAGTAAATGGCAGGAAGCCAAGACACCTCCCCATTGG
GAAAAAGGAACAGTGTTTTTGGGAGGTGGTTAATCTGGGAGCTTGTTTCC
GGGTTCCCTGGTTACCCCCCTGAAGTTTTTCAAGAGGGGTTTTTCGGGGT
GAATAAATTACAAAATCCCCCAATTCCTCTGGGTTCCTTTGAAGCCCTTT
CAAAAAAATCCCGAAAAACCAAAAGGGGTCGCAAGGGTTTGGTAAAAGGG
GTTTCCCCCCCCGGCCCCGGGGGCCCAAAAAAGGTTTTCCCGCGGCAAAA
GGCGCGCGAGGGTTTCTCCTTTGGGGCCGTAAAAAGAAAGGT
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