DY305796

Overview
NameDY305796
Unique NameDY305796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1246
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY305796 vs. ExPASy Swiss-Prot
Match: RL10_PAPAN (60S ribosomal protein L10 OS=Papio anubis GN=RPL10 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 3.299e-37
Identity = 77/113 (68.14%), Postives = 86/113 (76.11%), Query Frame = 2 
Query:   53 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACTQYMAKYAGKDAFLLQVRVRPFPVLRIN*MPSCAGGRPLLT 391
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI   +YM K  GKD F ++VR+ PF V+RIN M SCAG   L T
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQT 113
[Close]
BLAST of DY305796 vs. ExPASy Swiss-Prot
Match: RL10_MOUSE (60S ribosomal protein L10 OS=Mus musculus GN=Rpl10 PE=2 SV=3)

HSP 1 Score: 156.377 bits (394), Expect = 3.299e-37
Identity = 77/113 (68.14%), Postives = 86/113 (76.11%), Query Frame = 2 
Query:   53 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACTQYMAKYAGKDAFLLQVRVRPFPVLRIN*MPSCAGGRPLLT 391
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI   +YM K  GKD F ++VR+ PF V+RIN M SCAG   L T
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQT 113
[Close]
BLAST of DY305796 vs. ExPASy Swiss-Prot
Match: RL10_HUMAN (60S ribosomal protein L10 OS=Homo sapiens GN=RPL10 PE=1 SV=4)

HSP 1 Score: 156.377 bits (394), Expect = 3.299e-37
Identity = 77/113 (68.14%), Postives = 86/113 (76.11%), Query Frame = 2 
Query:   53 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACTQYMAKYAGKDAFLLQVRVRPFPVLRIN*MPSCAGGRPLLT 391
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI   +YM K  GKD F ++VR+ PF V+RIN M SCAG   L T
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQT 113
[Close]
BLAST of DY305796 vs. ExPASy Swiss-Prot
Match: RL10_BOVIN (60S ribosomal protein L10 OS=Bos taurus GN=RPL10 PE=2 SV=4)

HSP 1 Score: 156.377 bits (394), Expect = 3.299e-37
Identity = 77/113 (68.14%), Postives = 86/113 (76.11%), Query Frame = 2 
Query:   53 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACTQYMAKYAGKDAFLLQVRVRPFPVLRIN*MPSCAGGRPLLT 391
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI   +YM K  GKD F ++VR+ PF V+RIN M SCAG   L T
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQT 113
[Close]
BLAST of DY305796 vs. ExPASy Swiss-Prot
Match: RL10L_MOUSE (60S ribosomal protein L10-like OS=Mus musculus GN=Rpl10l PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 3.299e-37
Identity = 77/113 (68.14%), Postives = 86/113 (76.11%), Query Frame = 2 
Query:   53 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACTQYMAKYAGKDAFLLQVRVRPFPVLRIN*MPSCAGGRPLLT 391
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI   +YM K  GKD F ++VR+ PF V+RIN M SCAG   L T
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQT 113
[Close]
BLAST of DY305796 vs. ExPASy Swiss-Prot
Match: RL10L_BOVIN (60S ribosomal protein L10-like OS=Bos taurus GN=RPL10L PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 3.299e-37
Identity = 77/113 (68.14%), Postives = 86/113 (76.11%), Query Frame = 2 
Query:   53 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACTQYMAKYAGKDAFLLQVRVRPFPVLRIN*MPSCAGGRPLLT 391
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI   +YM K  GKD F ++VR+ PF V+RIN M SCAG   L T
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQT 113
[Close]
BLAST of DY305796 vs. ExPASy Swiss-Prot
Match: RL10L_MACFA (60S ribosomal protein L10-like OS=Macaca fascicularis GN=RPL10L PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 7.350e-37
Identity = 76/113 (67.26%), Postives = 86/113 (76.11%), Query Frame = 2 
Query:   53 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACTQYMAKYAGKDAFLLQVRVRPFPVLRIN*MPSCAGGRPLLT 391
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI   +YM K  G+D F ++VR+ PF V+RIN M SCAG   L T
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGRDGFHMRVRLHPFHVIRINKMLSCAGADRLQT 113
[Close]
BLAST of DY305796 vs. ExPASy Swiss-Prot
Match: RL10_YEAST (60S ribosomal protein L10 OS=Saccharomyces cerevisiae GN=RPL10 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 6.222e-36
Identity = 80/125 (64.00%), Postives = 89/125 (71.20%), Query Frame = 2 
Query:   53 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACTQYMAKYAGKDAFLLQVRVRPFPVLRIN*MPSCAGGRPLLTVLCVRYFFPHAL 427
            M RRPARCYR  KNKPYPKSR+ R VPD KIRIYD+G KK  VDEFP CVHLVS E E +SSEALEAARI   +YM   +G+DAF L+VRV PF VLRIN M SCAG   L   +   +  PH L
Sbjct:    1 MARRPARCYRYQKNKPYPKSRYNRAVPDSKIRIYDLGKKKATVDEFPLCVHLVSNELEQLSSEALEAARICANKYMTTVSGRDAFHLRVRVHPFHVLRINKMLSCAGADRLQQGMRGAWGKPHGL 125
[Close]
BLAST of DY305796 vs. ExPASy Swiss-Prot
Match: RL10_MACFA (60S ribosomal protein L10 OS=Macaca fascicularis GN=RPL10 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 8.126e-36
Identity = 76/113 (67.26%), Postives = 85/113 (75.22%), Query Frame = 2 
Query:   53 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACTQYMAKYAGKDAFLLQVRVRPFPVLRIN*MPSCAGGRPLLT 391
            MGRRPAR YR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI   +YM K  GKD F ++VR+ PF V+RIN M SCAG   L T
Sbjct:    1 MGRRPARRYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQT 113
[Close]
BLAST of DY305796 vs. ExPASy Swiss-Prot
Match: RL10L_HUMAN (60S ribosomal protein L10-like OS=Homo sapiens GN=RPL10L PE=1 SV=3)

HSP 1 Score: 150.599 bits (379), Expect = 1.810e-35
Identity = 75/113 (66.37%), Postives = 85/113 (75.22%), Query Frame = 2 
Query:   53 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACTQYMAKYAGKDAFLLQVRVRPFPVLRIN*MPSCAGGRPLLT 391
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP   H+VS E E +SSEALEAARI   +YM K  G+D F ++VR+ PF V+RIN M SCAG   L T
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLGGHMVSDEYEQLSSEALEAARICANKYMVKSCGRDGFHMRVRLHPFHVIRINKMLSCAGADRLQT 113
The following BLAST results are available for this feature:
BLAST of DY305796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
RL10_PAPAN3.299e-3768.1460S ribosomal protein L10 OS=Papio anubis GN=RPL10... [more]
RL10_MOUSE3.299e-3768.1460S ribosomal protein L10 OS=Mus musculus GN=Rpl10... [more]
RL10_HUMAN3.299e-3768.1460S ribosomal protein L10 OS=Homo sapiens GN=RPL10... [more]
RL10_BOVIN3.299e-3768.1460S ribosomal protein L10 OS=Bos taurus GN=RPL10 P... [more]
RL10L_MOUSE3.299e-3768.1460S ribosomal protein L10-like OS=Mus musculus GN=... [more]
RL10L_BOVIN3.299e-3768.1460S ribosomal protein L10-like OS=Bos taurus GN=RP... [more]
RL10L_MACFA7.350e-3767.2660S ribosomal protein L10-like OS=Macaca fascicula... [more]
RL10_YEAST6.222e-3664.0060S ribosomal protein L10 OS=Saccharomyces cerevis... [more]
RL10_MACFA8.126e-3667.2660S ribosomal protein L10 OS=Macaca fascicularis G... [more]
RL10L_HUMAN1.810e-3566.3760S ribosomal protein L10-like OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2BE10RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305796 ID=DY305796; Name=DY305796; organism=Citrus sinensis; type=EST; length=1246bp
GCGGAGCCGAGCAGAAAGAGAGAATAGCTGAGACCGAACACGAACGCTCG
CCATGGGAAGAAGACCGGCAAGGTGTTACCGCCAAATCAAGAACAAACCC
TACCCAAAGTCCCGCTTTTGCCGCGGTGTCCCCGATCCCAAGATCAGAAT
CTACGATGTCGGGATGAAGAAGAAAGGCGTCGACGAGTTCCCCTTCTGCG
TTCACCTCGTCAGTTGGGAGAAGGAGAACGTGTCGAGCGAGGCCTTGGAA
GCTGCCCGTATCGCTTGCACACAGTACATGGCCAAGTACGCTGGCAAGGA
TGCTTTCCTTTTGCAAGTGAGGGTGCGCCCCTTCCCCGTTCTGCGCATTA
ACTAGATGCCTTCATGTGCTGGTGGACGTCCGCTACTTACTGTATTGTGT
GTCCGCTATTTCTTCCCCCACGCTCTGCACCTTTTTTCTGGGTCTCTTGT
GTTTCGAAACTCGCTTTTTCGATTAATTAGGCACTCCCATCTAACTATTG
CTCGATGGTCCCGCACAATAATGGATCCTAAGGAGCAAGGAATCGTAAAT
TTTAGAATGGGCTTCTTGGCCTCAGTTTCCTACTATGTTAATTAATGTAC
CTAATATAAGAAAAAACCCGGGGTCCCATCGAATTATCTTCCCCATGAGA
CCGAGCTCTAATACAGGAGAGGGGTACTTCATTTTCTCGGACCATTTTGA
AAAACTATCTCCCTTATCCCTAGTCCCTTTCTTCCTATTGGATGCAAAAA
ATTCAACACGATTGGGATCGTGAAACTCCTAAAATTGTCGTAACGATGGC
AGGAACATTAAATGAGATCGAATAATGACGTGAACGGAATAATTTTTAGT
ATTTCTGCTTTTAATCTCATTTTTTAGCGGCAGACCCATTTCGAGCCCCC
AGCCCAGGCCACACAATATAAATTTGTGGATGTAAGGTCAGTTATCTCTG
TCTATCCTCCGTGCATGTTTTACCTAAAGATTTGTGGGATTGATAAATAT
ACGATTTTTTAAACCATTCAACACATTGCCATCCGGGAGCTGCAAGTATG
TTGCGCTCAGCGTCATACTATGGTCATTCCCAGCTGTAAGTCGCTTTGAT
TACCTCACAGCAGCCGACACTGTCGCTAAATGATTCTCACTTAATTTTTT
TTATAAGTACTTGCGCTAAATCGTTTTACTTTCTTTTACTCGAAAGAATT
GGCCACGGTCTTTTGCCTCCCTGTCTTTCTTTGCCCGATTCTTTAT
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