EY702634

Overview
NameEY702634
Unique NameEY702634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702634 vs. ExPASy Swiss-Prot
Match: SKP1_BOVIN (S-phase kinase-associated protein 1 OS=Bos taurus GN=SKP1 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.578e-43
Identity = 89/154 (57.79%), Postives = 115/154 (74.68%), Query Frame = 2
Query:   53 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRREN 493
            I L+SSDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +     + D+   +  DD+  WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+EN
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKEN 157          
BLAST of EY702634 vs. ExPASy Swiss-Prot
Match: ASK9_ARATH (SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.257e-42
Identity = 88/151 (58.28%), Postives = 111/151 (73.51%), Query Frame = 2
Query:   47 EEITLKSSDGETFEVEETVALESQTI-KHMVEDDCADTVIPLPNVTSTILSKVIEYCKKH-VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRREN 493
            ++I LKSSDG +FEVEE  A + Q I  HM E+DC D  IPLPNVT  IL+ VIEYC KH V+A +        ++DDLK WD +F++ D +T+FDLI AANYLNIK L DL CQTVA++IKG TPE+IR+ FNI+ND +P+EE  +RREN
Sbjct:    4 KKIILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCNKHHVDAAN------PCSDDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVAEIIKGNTPEQIREFFNIENDLTPEEEAAIRREN 148          
BLAST of EY702634 vs. ExPASy Swiss-Prot
Match: ASK18_ARATH (SKP1-like protein 18 OS=Arabidopsis thaliana GN=ASK18 PE=1 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 6.147e-41
Identity = 84/149 (56.38%), Postives = 111/149 (74.50%), Query Frame = 2
Query:   50 EITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFV-KVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRREN 493
            +I L SSDGE+FE++E VA +   I HM+ED+CA   IPL NVT  ILSK+IEY K HV   S ++ +D+  + +L +WDA F+ K+D  T+F +ILAANYLN +GLL    QTVAD IK KTPEE+R+ FNI+NDF+P+EEEE+R+EN
Sbjct:    5 KILLTSSDGESFEIDEAVARKFLIIVHMMEDNCAGEAIPLENVTGDILSKIIEYAKMHVNEPS-EEDEDEEAKKNLDSWDAKFMEKLDLETIFKIILAANYLNFEGLLGFASQTVADYIKDKTPEEVREIFNIENDFTPEEEEEIRKEN 152          
BLAST of EY702634 vs. ExPASy Swiss-Prot
Match: ASK16_ARATH (SKP1-like protein 16 OS=Arabidopsis thaliana GN=ASK16 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.049e-40
Identity = 83/158 (52.53%), Postives = 112/158 (70.89%), Query Frame = 2
Query:   50 EITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKD---------DKSTEDDLKTWDADFVK-VDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRREN 493
            +I L SSD E+FEVEE VA + + I HM++DDCAD  IPL NVT  IL+ VIEYCKKHV     D  D         ++  +++L+TWDA+F+K  D  T+  LILA NYLN++ LL LTCQTVAD +K  +PEE+R+ FNI+ND++P+EE+ +R+EN
Sbjct:    5 KIVLTSSDDESFEVEEAVARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYCKKHVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLLGLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKEN 162          
BLAST of EY702634 vs. ExPASy Swiss-Prot
Match: ASK19_ARATH (SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.369e-40
Identity = 93/182 (51.10%), Postives = 118/182 (64.84%), Query Frame = 2
Query:   47 EEITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVE-----------AGSGDKK--------DD----KSTEDD---------LKTWDADFVK-VDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRREN 493
            ++I L SSDGE+F+VEE VA + Q + H++EDDCA   IP+PNVT  IL+KVIEYCKKHVE           +  GDK         DD    +STE D         L  WDA F+K  D  T+FD+ILAANYLN++GL DL  +T+AD IK  TPEE+R+ FNI+NDF+P+EEE +R EN
Sbjct:    4 KKIVLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNKIPIPNVTGEILAKVIEYCKKHVEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKFMKDFDIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEEAIRNEN 185          
BLAST of EY702634 vs. ExPASy Swiss-Prot
Match: ASK5_ARATH (SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK5 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.405e-39
Identity = 85/154 (55.19%), Postives = 111/154 (72.08%), Query Frame = 2
Query:   50 EITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNT-LFDLILAANYLNIKGLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRREN 493
            +I LKSSDG++FE++E VA +S  I HMVED CA  VIPL NVTS IL  VI+YC+KHV++           E+DLK WDADF+K  + T LFD+++AANYLNI+ LLDLTC+TV     AD++ GKTP+EIR  FNI+ND + +E  ++R EN
Sbjct:    4 KIMLKSSDGKSFEIDEDVARKSIAINHMVEDGCATDVIPLRNVTSKILKIVIDYCEKHVKS---------KEEEDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLTCKTVSDLLQADLLSGKTPDEIRAHFNIENDLTAEEVAKIREEN 148          
BLAST of EY702634 vs. ExPASy Swiss-Prot
Match: ASK8_ARATH (SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.200e-36
Identity = 78/150 (52.00%), Postives = 108/150 (72.00%), Query Frame = 2
Query:   47 EEITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKH-VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRREN 493
            ++I LKSS+G+TFE+EE  A + QTI HM+E +C D VI +  +TS IL  VIEYC KH V+A +        ++DDL+ WD +F++ D++T+F L  AAN+LN K LL L  QTVADMIKG TP+++R+ FNI+ND +P+EE  +RREN
Sbjct:    4 KKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKHHVDAAN------PCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRREN 147          
BLAST of EY702634 vs. ExPASy Swiss-Prot
Match: SKP1_SCHPO (Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe GN=skp1 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.016e-35
Identity = 80/155 (51.61%), Postives = 113/155 (72.90%), Query Frame = 2
Query:   50 EITLKSSDGETFEVEETVALESQTIKHMVEDDCADTV-IPLPNVTSTILSKVIEYCKKH---VEAGSGDKKD---DKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRREN 493
            +I L SSD E F V++ +A  S  IK+M+ED     V IPLPNV+S +L KV+E+C+ H   + +G+ ++ D    KST  D+  WD  F+ VDQ  LF+++LA+NYL+IK LLD  C+TVA+MI+GK+PE+IRKTFNI NDF+P+EEE++R+EN
Sbjct:    3 KIKLISSDNEEFVVDQLIAERSMLIKNMLEDVGEINVPIPLPNVSSNVLRKVLEWCEHHKNDLYSGTEEESDIRLKKST--DIDEWDRKFMAVDQEMLFEIVLASNYLDIKPLLDTGCKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKEN 155          
BLAST of EY702634 vs. ExPASy Swiss-Prot
Match: ASK17_ARATH (SKP1-like protein 17 OS=Arabidopsis thaliana GN=ASK17 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.955e-35
Identity = 75/150 (50.00%), Postives = 104/150 (69.33%), Query Frame = 2
Query:   47 EEITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVK-VDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRREN 493
            ++I L SSD E FE++E VA + Q + HM++DDCAD  I L NVT  IL+ +IEYCKKHV        DD   +++  TWDA+FVK +D +TLF L+ AA+YL + GL +L  Q +AD    KT  EIR+ FNI+ND++P+EEEE+R++N
Sbjct:    4 KKIVLTSSDDECFEIDEAVARKMQMVAHMIDDDCADKAIRLQNVTGKILAIIIEYCKKHV--------DDVEAKNEFVTWDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAIADYTADKTVNEIRELFNIENDYTPEEEEELRKKN 145          
BLAST of EY702634 vs. ExPASy Swiss-Prot
Match: SKP1_YEAST (Suppressor of kinetochore protein 1 OS=Saccharomyces cerevisiae GN=SKP1 PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.982e-31
Identity = 74/188 (39.36%), Postives = 110/188 (58.51%), Query Frame = 2
Query:   38 VV*EEITLKSSDGETFEVEETVALESQTIKHMVED-----------------------------------DCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTED-DLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRREN 493
            +V   + L S +GE F V++ +A  S  +K+ + D                                   D  + V+P+PNV S++L KVIE+ + H ++   D+ DD S +   + +WD +F+KVDQ  L+++ILAANYLNIK LLD  C+ VA+MI+G++PEEIR+TFNI NDF+P+EE  +RREN
Sbjct:    1 MVTSNVVLVSGEGERFTVDKKIAERSLLLKNYLNDMHDSNLQNNSDSESDSDSETNHKSKDNNNGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRREN 188          
The following BLAST results are available for this feature:
BLAST of EY702634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SKP1_BOVIN8.578e-4357.79S-phase kinase-associated protein 1 OS=Bos taurus ... [more]
ASK9_ARATH4.257e-4258.28SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK... [more]
ASK18_ARATH6.147e-4156.38SKP1-like protein 18 OS=Arabidopsis thaliana GN=AS... [more]
ASK16_ARATH1.049e-4052.53SKP1-like protein 16 OS=Arabidopsis thaliana GN=AS... [more]
ASK19_ARATH1.369e-4051.10SKP1-like protein 19 OS=Arabidopsis thaliana GN=AS... [more]
ASK5_ARATH4.405e-3955.19SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK... [more]
ASK8_ARATH1.200e-3652.00SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK... [more]
SKP1_SCHPO1.016e-3551.61Suppressor of kinetochore protein 1 OS=Schizosacch... [more]
ASK17_ARATH2.955e-3550.00SKP1-like protein 17 OS=Arabidopsis thaliana GN=AS... [more]
SKP1_YEAST1.982e-3139.36Suppressor of kinetochore protein 1 OS=Saccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-010-D02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702634 ID=EY702634; Name=EY702634; organism=Citrus sinensis; type=EST; length=709bp
AATAGCTTTAGTGAAAACCGTAACTCTCAGAAACGATGTCGTCTGAGAAG
AAATCACTCTGAAGAGTTCGGACGGTGAGACGTTCGAGGTGGAGGAGACG
GTGGCCCTCGAGTCGCAGACAATCAAGCACATGGTGGAGGACGACTGCGC
CGACACCGTAATCCCGCTGCCGAATGTGACGAGCACGATTCTCTCGAAGG
TTATCGAGTACTGCAAGAAGCACGTTGAGGCTGGGTCAGGGGACAAGAAG
GACGACAAGTCGACCGAGGATGATCTCAAGACCTGGGATGCAGACTTCGT
CAAGGTTGATCAGAATACCCTCTTTGACCTAATCTTGGCCGCCAATTACC
TGAACATTAAGGGTTTGCTGGACTTGACCTGCCAAACTGTTGCAGACATG
ATCAAGGGGAAGACTCCAGAGGAGATCCGCAAGACCTTCAACATCAAGAA
TGACTTCTCTCCCGATGAAGAAGAGGAGGTTCGGAGAGAGAACAATGGGC
ATTCGAGTGAAGGACTGAAGTGATGAAGGCTCGGTAATTAATATTTGTGA
TACGAATGTCGTTATAATGATAGTGGTCTTTTAGTATGTTGCCAGTAGGT
GTCTAGTATGAACATCAACATTTCCTTTTGTCGTGGACCTGTGAATGCTG
CTCGATATAAATGTCTTGAACCCTTGGCTATTGCATTAAAAAAATAAAAA
AAAAAAAAA
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