EY702634

Overview
NameEY702634
Unique NameEY702634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702634 vs. ExPASy Swiss-Prot
Match: ASK7_ARATH (SKP1-like protein 7 OS=Arabidopsis thaliana GN=ASK7 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.586e-26
Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = 2
Query:   47 EEITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKK-HVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMI 403
            ++I LKSSDG+ FE+EE  A + QTI HM+E +C D VIP+ NVTS IL  VIEYC K HV+A       +  +++DLK WD +F++ DQ T+F L+ AA  L+IK LL L  QTVADM+
Sbjct:    4 KKIMLKSSDGKMFEIEEETARQCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCNKHHVDAA------NPCSDEDLKKWDKEFMEKDQYTIFHLMNAAYDLHIKSLLALAYQTVADMV 117          
BLAST of EY702634 vs. ExPASy Swiss-Prot
Match: ASK6_ARATH (SKP1-like protein 6 OS=Arabidopsis thaliana GN=ASK6 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.172e-21
Identity = 54/87 (62.07%), Postives = 65/87 (74.71%), Query Frame = 2
Query:  122 IKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFV-KVDQNTLFDLILAANYLNIKGLLDLT 379
            IK M EDDCAD  IPLPNVTS IL  VIEYCKKHV          +S E+DLK WDA+F+ K++Q+ LFD+++AANYLNI+ LLDLT
Sbjct:    3 IKGMAEDDCADNGIPLPNVTSKILLLVIEYCKKHVV---------ESKEEDLKKWDAEFMKKMEQSILFDVMMAANYLNIQSLLDLT 80          
BLAST of EY702634 vs. ExPASy Swiss-Prot
Match: ASK21_ARATH (SKP1-like protein 21 OS=Arabidopsis thaliana GN=ASK21 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13
Identity = 48/147 (32.65%), Postives = 84/147 (57.14%), Query Frame = 2
Query:   53 ITLKSSDGETFEVEETVALESQTI-KHMVEDDCADT---VIPLPN-VTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEE 478
            I L+++DG   +VE+ VA+    I + +++     +    I LP  V   +LS + +YC+ H   G  +K        + K +D  F+++D   L +L  AA+ L +K L+DLT + +A +I+GKTPEEIR+ F++ +D + +E+ E
Sbjct:   18 IWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPAMLSLIFDYCRFHQVPGRSNK--------ERKVYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLE 156          
BLAST of EY702634 vs. ExPASy Swiss-Prot
Match: ASK20_ARATH (SKP1-like protein 20 OS=Arabidopsis thaliana GN=ASK20 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13
Identity = 50/164 (30.49%), Postives = 93/164 (56.71%), Query Frame = 2
Query:    2 IALVKTVTLRNDVV*EEITLKSSDGETFEVEETVALESQTI-KHMVEDDCADT---VIPLPN-VTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEE 478
            +A++K  T+++      I L+++DG   +VE+ VA+    I + +++     +    I LP  V   + S +++YC+ H   G  +K        + KT+D  F+++D   L +L  AA+ L +K L+DLT + +A +I+GK PEEIR+ F++ +D + +E+ E
Sbjct:    6 LAVMKPETMKS-----YIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLILDYCRFHQLPGRSNK--------ERKTYDERFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKNPEEIREIFHLPDDLTEEEKLE 156          
The following BLAST results are available for this feature:
BLAST of EY702634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
ASK7_ARATH5.586e-2652.50SKP1-like protein 7 OS=Arabidopsis thaliana GN=ASK... [more]
ASK6_ARATH3.172e-2162.07SKP1-like protein 6 OS=Arabidopsis thaliana GN=ASK... [more]
ASK21_ARATH1.427e-1332.65SKP1-like protein 21 OS=Arabidopsis thaliana GN=AS... [more]
ASK20_ARATH2.434e-1330.49SKP1-like protein 20 OS=Arabidopsis thaliana GN=AS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-010-D02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702634 ID=EY702634; Name=EY702634; organism=Citrus sinensis; type=EST; length=709bp
AATAGCTTTAGTGAAAACCGTAACTCTCAGAAACGATGTCGTCTGAGAAG
AAATCACTCTGAAGAGTTCGGACGGTGAGACGTTCGAGGTGGAGGAGACG
GTGGCCCTCGAGTCGCAGACAATCAAGCACATGGTGGAGGACGACTGCGC
CGACACCGTAATCCCGCTGCCGAATGTGACGAGCACGATTCTCTCGAAGG
TTATCGAGTACTGCAAGAAGCACGTTGAGGCTGGGTCAGGGGACAAGAAG
GACGACAAGTCGACCGAGGATGATCTCAAGACCTGGGATGCAGACTTCGT
CAAGGTTGATCAGAATACCCTCTTTGACCTAATCTTGGCCGCCAATTACC
TGAACATTAAGGGTTTGCTGGACTTGACCTGCCAAACTGTTGCAGACATG
ATCAAGGGGAAGACTCCAGAGGAGATCCGCAAGACCTTCAACATCAAGAA
TGACTTCTCTCCCGATGAAGAAGAGGAGGTTCGGAGAGAGAACAATGGGC
ATTCGAGTGAAGGACTGAAGTGATGAAGGCTCGGTAATTAATATTTGTGA
TACGAATGTCGTTATAATGATAGTGGTCTTTTAGTATGTTGCCAGTAGGT
GTCTAGTATGAACATCAACATTTCCTTTTGTCGTGGACCTGTGAATGCTG
CTCGATATAAATGTCTTGAACCCTTGGCTATTGCATTAAAAAAATAAAAA
AAAAAAAAA
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