DY305715
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL4F_ARATH (RING-H2 finger protein ATL4F OS=Arabidopsis thaliana GN=ATL4F PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.908e-16 Identity = 64/222 (28.83%), Postives = 103/222 (46.40%), Query Frame = 2 Query: 269 HIHHKSRKFLIITASALVTTIVAVLCYVVFVKFYLRRRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCR-----SPIVKINH----------------AARAPPSSSTWES----NNEDSGTRESTQVGILTENGGRNDMESEIGAVERR 859 +I S + I+ + +V + V+ V+ V + +RR S+ T+ D+ G V + +GL + + ++ YK+S V T+CSVCL ++Q +E L+ +P C H FH+ CID WL SHT CPLCR P V ++H A+ P S S E+ ++ + G R+S +V +E RN + + G R Sbjct: 9 YIPSNSTESQILKFTFIVCVPICVILIVLLVLYIMRRNSN--------TNVDWSSLG-GFVPTNNNLSTAELGLSKDIREMLPIVIYKESF-TVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPKPSVDLSHQSIEIVSSIENTNGGEASTQPDSQSATEAIIHIDDVEEGNRDSIEVVKESEENDRNSVGTSDGCCSCR 220
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL4E_ARATH (RING-H2 finger protein ATL4E OS=Arabidopsis thaliana GN=ATL4E PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.908e-16 Identity = 49/146 (33.56%), Postives = 76/146 (52.05%), Query Frame = 2 Query: 482 VGLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCR-----SPIVKINH----------------AARAPPSSSTWE----SNNEDSGTRESTQVGILTENGGRNDMESEIG 844 +GL + + V+ YK+S +V+ ++CSVCL ++Q +E L+ +P C H FH+ CID WL SHT CPLCR P + ++H A+ P S S E +++ + G R+S +V TE RN + + G Sbjct: 85 LGLSKDIREMLPVVIYKESF-IVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPKPSLDLSHQSTEIVSSIENSNGGEASTQPDSQSATEAISHTDDVEEGNRDSQEVSKETEENDRNSVGTSDG 229
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL5N_ARATH (Putative RING-H2 finger protein ATL5N OS=Arabidopsis thaliana GN=ATL5N PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.491e-16 Identity = 57/202 (28.22%), Postives = 101/202 (50.00%), Query Frame = 2 Query: 248 SPVTFKYHIHHKSRKFLIITASALVTTIVAVLCYVVFVK--FYLRRRSSSEPRI-LNETHDDFLDEDHGPVVDHPIWY-INTVGLQSSVIREIAVLKYKKSDGLVEG-TECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKINHAARAPPSSSTWESNNEDSGTRESTQVGILTENGGRNDMESE 838 S ++F Y LI S +V + +L + FV +L + P+ L++ +D + + + ++ + S I + +L YK GL ++C+VCL EF ++ LRLLPKC+HAFH+ CIDTWL +++ CPLCR ++ + A S+ ++ +++S +LT+ +D+ES+ Sbjct: 12 SSISFSYSSSTDKDFDLICMISPIVLLYITLLSIIFFVAALIHLLVKFLHRPQTRLDDAYDGITESSTALQGRYQTRFNLHDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDNLLLLGLTGTASSSTIVLVHESDGDNSQDSDSSFMLTD---LDDVESK 210
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL2K_ARATH (RING-H2 finger protein ATL2K OS=Arabidopsis thaliana GN=ATL2K PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 4.250e-16 Identity = 50/138 (36.23%), Postives = 69/138 (50.00%), Query Frame = 2 Query: 284 SRKFLIITASALVTTIVAVLCYVVFVKFYLRRRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYK-KSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRS 694 S K ++T + I+ V Y ++ KF L RRS+ F D V P GL S VI + K+D V GTEC+VCLS +E + R+LP C H FH+SC+DTWL + + CP+CR+ Sbjct: 25 SSKIFLVTTVSFSIIIIIVFVYYLYAKFVLHRRSA------------FQDLSFSVVSQPP-----KRGLDSLVIASLPTFVVGIKND--VAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRT 143
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL2G_ARATH (RING-H2 finger protein ATL2G OS=Arabidopsis thaliana GN=ATL2G PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.550e-16 Identity = 54/162 (33.33%), Postives = 80/162 (49.38%), Query Frame = 2 Query: 317 LVTTIVAVLCYVVFVKFYLRRRSS--SEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKKSDGL---VEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKINHAARAPPSSSTWESNNEDSGTREST 787 ++T + V+ ++VF + RR ++ S I T D + VV I + GL + I Y + + G EC+VCL EF++DETLRL+P C H FH C+D WL H+ CPLCR+ +V +N + ST + D GT S+ Sbjct: 54 VITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQ----VVR--IRRLTARGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADLV-LNQ--QGDDDDSTESYSGTDPGTISSS 206
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL1M_ARATH (RING-H2 finger protein ATL1M OS=Arabidopsis thaliana GN=ATL1M PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.550e-16 Identity = 37/100 (37.00%), Postives = 61/100 (61.00%), Query Frame = 2 Query: 473 INTVGLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKINHAARAPPSSSTWESNNEDSG 772 ++ GL S +++ I V+ +K +D +G EC+VCLS+ + + R+LP+CNH FH+ CID W +SH+ CPLCR+ + + S ++ N +SG Sbjct: 91 LHNAGLDSKILQSIHVVVFKCTD-FKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGSVEDTTHG-GSEGLPQNQNFESG 188
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL1P_ARATH (RING-H2 finger protein ATL1P OS=Arabidopsis thaliana GN=ATL1P PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 7.249e-16 Identity = 50/190 (26.32%), Postives = 93/190 (48.95%), Query Frame = 2 Query: 302 ITASALVTTIVAVLCYVVFV-------KFYLRRRSSSEPRILNETHDDFLDEDHGPVVDHPIWY--------------INTVGLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKINHAA-----RAPPSSST--WESNNEDSGTREST 787 +T+ ++T I+ + V+FV K Y R + + + + +ED + + ++ GL S + + ++ +++ D +G ECS+CLSE + + RLLPKCNH+FH+ CID W +SH+ CP+CR+ ++ A+ + P ++ +NN D+ ++ ST Sbjct: 20 VTSKIILTAIIVLFMAVLFVLILHLYAKLYWWRIDQLQQQQQQQQQEQEQEEDQSSIAPPVVTRRQRRRFIFVPGQDALSNTGLTSFELSSLPIVFFRQ-DSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQASSKRVEQVPDNAENAGTTNNNHDALSQLST 208
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL1R_ARATH (RING-H2 finger protein ATL1R OS=Arabidopsis thaliana GN=ATL1R PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 1.615e-15 Identity = 50/152 (32.89%), Postives = 76/152 (50.00%), Query Frame = 2 Query: 296 LIITASALVTTIVAVLCYVVFVKFYLRRRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKKSDGLVEG-TECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKIN-HAARAPPSSST 745 L++ + L+ + ++ + + RR +S R D+ H P P+ N GL+ V+R + L Y E EC++CL+EF + LR+LP+C H FH+SCIDTWL SH++CP CR +V H P SS+ Sbjct: 28 LVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRS---------DQTHPP----PVAAANK-GLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSS 165
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL1H_ARATH (RING-H2 finger protein ATL1H OS=Arabidopsis thaliana GN=ATL1H PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.615e-15 Identity = 48/137 (35.04%), Postives = 73/137 (53.28%), Query Frame = 2 Query: 299 IITASALVTTIVAVLCYVVFVKFYLRRRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKKSDGLV---EGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPI 700 +I A + T + ++L V K+ +++ P + T D + HG V + GL VI Y + GL G EC++CL+EF+++ETLRL+P C+HAFH SCID WL S + CP+CR+ + Sbjct: 48 VIIAMLMFTLLFSMLACCVCYKY-----TNTSP---HGTSSDTEEGGHGEVA---FTRRTSRGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASL 173
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL3J_ARATH (RING-H2 finger protein ATL3J OS=Arabidopsis thaliana GN=ATL3J PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.109e-15 Identity = 47/130 (36.15%), Postives = 67/130 (51.54%), Query Frame = 2 Query: 491 QSSVIREIAVLKY----KKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKINHAARAPPSSSTWESNNEDSGTRESTQVGILTENGGRNDMESEIGAVERRNIT 868 +SSV+ + + K+ ++S + G +C+VCLS+F+ ++ LRLLP C HAFH CID WL S+ CPLCRSP+ +S +S V GG N EIG++ RR T Sbjct: 90 RSSVLDSLPIFKFSSVTRRSSSMNSG-DCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFA------------------SESDLMKSLAVVGSNNGGGENSFRLEIGSISRRRQT 200 The following BLAST results are available for this feature:
BLAST of DY305715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305715 ID=DY305715; Name=DY305715; organism=Citrus sinensis; type=EST; length=1258bpback to top |