DY305715
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL5B_ARATH (RING-H2 finger protein ATL5B OS=Arabidopsis thaliana GN=ATL5B PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.598e-15 Identity = 34/74 (45.95%), Postives = 51/74 (68.92%), Query Frame = 2 Query: 485 GLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVK 706 G++ ++ I V Y + ++ TEC +CL +F E ET+R+LPKCNH FH+ CIDTWL SH++CP CR +++ Sbjct: 88 GIKKRALKVIPVDSYSP-ELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLLE 160
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL4O_ARATH (RING-H2 finger protein ATL4O OS=Arabidopsis thaliana GN=ATL4O PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 3.598e-15 Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 2 Query: 485 GLQSSVIREIAVLKY---KKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRS 694 GL ++V+ V Y K+S + EC++CL+E ++ ET+RLLP CNH FHI CIDTWL SH CP+CRS Sbjct: 94 GLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRS 166
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL4G_ARATH (RING-H2 finger protein ATL4G OS=Arabidopsis thaliana GN=ATL4G PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 3.598e-15 Identity = 47/132 (35.61%), Postives = 66/132 (50.00%), Query Frame = 2 Query: 317 LVTTIVAVLCYVVFVKFYLRRR----SSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPI 700 L TTI+ +L ++ V +L R SS F D P GL S+I+ + + + L ECSVCLSEF+++E+ R++P C H FH+ CID W SH++CPLCRS I Sbjct: 2 LTTTILILLIVILMVSLHLYYRWYLLRSSPFNRTTAASTFFTDPSSTPG-----------GLNPSIIKSLPIFTFSAVTALF-AMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQI 121
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL3B_ARATH (RING-H2 finger protein ATL3B OS=Arabidopsis thaliana GN=ATL3B PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 3.598e-15 Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 2 Query: 485 GLQSSVIREIAVLKYK--KSDGLVEGT-ECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVK 706 GL SV+ Y K+ L +G EC++CL+EF++DETLRLLPKC+H FH CID WL +H CP+CR+ + + Sbjct: 99 GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAE 175
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL2E_ARATH (RING-H2 finger protein ATL2E OS=Arabidopsis thaliana GN=ATL2E PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 4.699e-15 Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 485 GLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRS 694 GL S +R + V +Y K+ +C +CLS+F+E ET++++P C H FH+ C+DTWL S+ CPLCRS Sbjct: 115 GLDSQAVRSLPVYRYTKA-AKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRS 183
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL3C_ARATH (RING-H2 finger protein ATL3C OS=Arabidopsis thaliana GN=ATL3C PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 8.015e-15 Identity = 43/138 (31.16%), Postives = 77/138 (55.80%), Query Frame = 2 Query: 296 LIITASALVTTIVAVLCYVVFVKFYLR--RRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIV 703 ++I +AL+ ++ L ++ LR RR +S+ ++ N ++ + + G + GL+ +++I V Y ++ TEC +CL +F++ E +R+LPKCNH FH+ CIDTWL S ++CP CR ++ Sbjct: 33 MVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASN---ANANLGRLAA-------ATGLKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLL 160
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL3F_ARATH (RING-H2 finger protein ATL3F OS=Arabidopsis thaliana GN=ATL3F PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.047e-14 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 2 Query: 485 GLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRS 694 GL +VI+ + V + + + EC+VCLSEF+E ET R+LP C H FH+ CID W SH+ CPLCRS Sbjct: 94 GLDPNVIKSLPVFTFS-DETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRS 162
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL1J_ARATH (RING-H2 finger protein ATL1J OS=Arabidopsis thaliana GN=ATL1J PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.047e-14 Identity = 53/172 (30.81%), Postives = 78/172 (45.35%), Query Frame = 2 Query: 215 HNFLQSLIPTPSPVTFKYHIHHKSRKF-LIITASALVTTIVAVLCYVVFVKFYLRRRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTV------GLQSSVIREIAVLKYKKSDGLVE-GTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVK 706 HN L+ PSP+ H + K +++ S L+ I+ L ++ RR S ++ PI ++T G++ +R V+ Y + L G EC +CLS+F E LRLLPKCNH FH+ CID WL+ H CP CR +V+ Sbjct: 34 HNSLRVFAVAPSPLI----THENNLKGNVLMLLSVLICGIICCLGLHYIIRCAFRRSSRF-------------------MISEPISSLSTPRSSSNKGIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVE 182
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL1K_ARATH (RING-H2 finger protein ATL1K OS=Arabidopsis thaliana GN=ATL1K PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.786e-14 Identity = 60/200 (30.00%), Postives = 91/200 (45.50%), Query Frame = 2 Query: 215 HNFLQSLIPTPSPVTFKYHIHHKSRKFLIITASALVTTIVAVLCYVVFVKFYLRRRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKKS---DGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKINHAARAPPSSSTWESNNEDSGTRESTQVGILT 805 HN ++ PSP+ H ++ S +++ S L+ I+ L ++ LRR + R + L G + G++ +R V+ Y GL E EC +CLS+F E LRLLPKCNH FH+ CID WL+ H CP CR+ +V+ + + DS T E T++ I+T Sbjct: 34 HNTQRAFAVAPSPLIT--HENNLSGNVMMLL-SILICGIICCLGLHYIIRCALRRST----RFMISEPVPSLSSTRGS---------SNKGIKKKALRMFPVVSYSPEMNLPGLDE--ECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQKILG-------DFSQADSVTAEPTEIVIVT 208
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL1B_ARATH (RING-H2 finger protein ATL1B OS=Arabidopsis thaliana GN=ATL1B PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.332e-14 Identity = 51/175 (29.14%), Postives = 88/175 (50.29%), Query Frame = 2 Query: 296 LIITASALVTTIVAVLCYVVFVKFYLRRRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYK-KSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKIN-HAARAPPSSSTWESNNEDSGTRESTQVGILTENG 814 L++ +AL+ ++ VL + + RR ++ R ++ + + P P+ N GL+ V++ + L + +S + EC++CL+EF + LR+LP+C H FH++CIDTWL SH++CP CR +V H P SS+ SG ++ I + G Sbjct: 30 LVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGS------QTQSP--QPPVAAANK-GLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSS-------SGLESEPEIEIRIKQG 188 The following BLAST results are available for this feature:
BLAST of DY305715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305715 ID=DY305715; Name=DY305715; organism=Citrus sinensis; type=EST; length=1258bpback to top |