DY305715

Overview
NameDY305715
Unique NameDY305715
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1258
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL5B_ARATH (RING-H2 finger protein ATL5B OS=Arabidopsis thaliana GN=ATL5B PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.598e-15
Identity = 34/74 (45.95%), Postives = 51/74 (68.92%), Query Frame = 2
Query:  485 GLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVK 706
            G++   ++ I V  Y   +  ++ TEC +CL +F E ET+R+LPKCNH FH+ CIDTWL SH++CP CR  +++
Sbjct:   88 GIKKRALKVIPVDSYSP-ELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLLE 160          
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL4O_ARATH (RING-H2 finger protein ATL4O OS=Arabidopsis thaliana GN=ATL4O PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 3.598e-15
Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 2
Query:  485 GLQSSVIREIAVLKY---KKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRS 694
            GL ++V+    V  Y   K+S    +  EC++CL+E ++ ET+RLLP CNH FHI CIDTWL SH  CP+CRS
Sbjct:   94 GLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRS 166          
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL4G_ARATH (RING-H2 finger protein ATL4G OS=Arabidopsis thaliana GN=ATL4G PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 3.598e-15
Identity = 47/132 (35.61%), Postives = 66/132 (50.00%), Query Frame = 2
Query:  317 LVTTIVAVLCYVVFVKFYLRRR----SSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPI 700
            L TTI+ +L  ++ V  +L  R     SS           F D    P            GL  S+I+ + +  +     L    ECSVCLSEF+++E+ R++P C H FH+ CID W  SH++CPLCRS I
Sbjct:    2 LTTTILILLIVILMVSLHLYYRWYLLRSSPFNRTTAASTFFTDPSSTPG-----------GLNPSIIKSLPIFTFSAVTALF-AMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQI 121          
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL3B_ARATH (RING-H2 finger protein ATL3B OS=Arabidopsis thaliana GN=ATL3B PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 3.598e-15
Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 2
Query:  485 GLQSSVIREIAVLKYK--KSDGLVEGT-ECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVK 706
            GL  SV+       Y   K+  L +G  EC++CL+EF++DETLRLLPKC+H FH  CID WL +H  CP+CR+ + +
Sbjct:   99 GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAE 175          
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL2E_ARATH (RING-H2 finger protein ATL2E OS=Arabidopsis thaliana GN=ATL2E PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.699e-15
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 2
Query:  485 GLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRS 694
            GL S  +R + V +Y K+       +C +CLS+F+E ET++++P C H FH+ C+DTWL S+  CPLCRS
Sbjct:  115 GLDSQAVRSLPVYRYTKA-AKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRS 183          
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL3C_ARATH (RING-H2 finger protein ATL3C OS=Arabidopsis thaliana GN=ATL3C PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.015e-15
Identity = 43/138 (31.16%), Postives = 77/138 (55.80%), Query Frame = 2
Query:  296 LIITASALVTTIVAVLCYVVFVKFYLR--RRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIV 703
            ++I  +AL+  ++  L     ++  LR  RR +S+ ++ N ++    + + G +           GL+   +++I V  Y      ++ TEC +CL +F++ E +R+LPKCNH FH+ CIDTWL S ++CP CR  ++
Sbjct:   33 MVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASN---ANANLGRLAA-------ATGLKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLL 160          
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL3F_ARATH (RING-H2 finger protein ATL3F OS=Arabidopsis thaliana GN=ATL3F PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.047e-14
Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 2
Query:  485 GLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRS 694
            GL  +VI+ + V  +   +   +  EC+VCLSEF+E ET R+LP C H FH+ CID W  SH+ CPLCRS
Sbjct:   94 GLDPNVIKSLPVFTFS-DETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRS 162          
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL1J_ARATH (RING-H2 finger protein ATL1J OS=Arabidopsis thaliana GN=ATL1J PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.047e-14
Identity = 53/172 (30.81%), Postives = 78/172 (45.35%), Query Frame = 2
Query:  215 HNFLQSLIPTPSPVTFKYHIHHKSRKF-LIITASALVTTIVAVLCYVVFVKFYLRRRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTV------GLQSSVIREIAVLKYKKSDGLVE-GTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVK 706
            HN L+     PSP+      H  + K  +++  S L+  I+  L     ++   RR S                     ++  PI  ++T       G++   +R   V+ Y +   L   G EC +CLS+F   E LRLLPKCNH FH+ CID WL+ H  CP CR  +V+
Sbjct:   34 HNSLRVFAVAPSPLI----THENNLKGNVLMLLSVLICGIICCLGLHYIIRCAFRRSSRF-------------------MISEPISSLSTPRSSSNKGIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVE 182          
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL1K_ARATH (RING-H2 finger protein ATL1K OS=Arabidopsis thaliana GN=ATL1K PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.786e-14
Identity = 60/200 (30.00%), Postives = 91/200 (45.50%), Query Frame = 2
Query:  215 HNFLQSLIPTPSPVTFKYHIHHKSRKFLIITASALVTTIVAVLCYVVFVKFYLRRRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKKS---DGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKINHAARAPPSSSTWESNNEDSGTRESTQVGILT 805
            HN  ++    PSP+    H ++ S   +++  S L+  I+  L     ++  LRR +    R +       L    G          +  G++   +R   V+ Y       GL E  EC +CLS+F   E LRLLPKCNH FH+ CID WL+ H  CP CR+ +V+              + +  DS T E T++ I+T
Sbjct:   34 HNTQRAFAVAPSPLIT--HENNLSGNVMMLL-SILICGIICCLGLHYIIRCALRRST----RFMISEPVPSLSSTRGS---------SNKGIKKKALRMFPVVSYSPEMNLPGLDE--ECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQKILG-------DFSQADSVTAEPTEIVIVT 208          
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL1B_ARATH (RING-H2 finger protein ATL1B OS=Arabidopsis thaliana GN=ATL1B PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.332e-14
Identity = 51/175 (29.14%), Postives = 88/175 (50.29%), Query Frame = 2
Query:  296 LIITASALVTTIVAVLCYVVFVKFYLRRRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYK-KSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKIN-HAARAPPSSSTWESNNEDSGTRESTQVGILTENG 814
            L++  +AL+  ++ VL  +   +    RR ++  R ++ +      +   P    P+   N  GL+  V++ +  L +  +S    +  EC++CL+EF   + LR+LP+C H FH++CIDTWL SH++CP CR  +V    H     P SS+       SG     ++ I  + G
Sbjct:   30 LVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGS------QTQSP--QPPVAAANK-GLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSS-------SGLESEPEIEIRIKQG 188          
The following BLAST results are available for this feature:
BLAST of DY305715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
ATL5B_ARATH3.598e-1545.95RING-H2 finger protein ATL5B OS=Arabidopsis thalia... [more]
ATL4O_ARATH3.598e-1550.68RING-H2 finger protein ATL4O OS=Arabidopsis thalia... [more]
ATL4G_ARATH3.598e-1535.61RING-H2 finger protein ATL4G OS=Arabidopsis thalia... [more]
ATL3B_ARATH3.598e-1548.05RING-H2 finger protein ATL3B OS=Arabidopsis thalia... [more]
ATL2E_ARATH4.699e-1545.71RING-H2 finger protein ATL2E OS=Arabidopsis thalia... [more]
ATL3C_ARATH8.015e-1531.16RING-H2 finger protein ATL3C OS=Arabidopsis thalia... [more]
ATL3F_ARATH1.047e-1450.00RING-H2 finger protein ATL3F OS=Arabidopsis thalia... [more]
ATL1J_ARATH1.047e-1430.81RING-H2 finger protein ATL1J OS=Arabidopsis thalia... [more]
ATL1K_ARATH1.786e-1430.00RING-H2 finger protein ATL1K OS=Arabidopsis thalia... [more]
ATL1B_ARATH2.332e-1429.14RING-H2 finger protein ATL1B OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2AC02RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305715 ID=DY305715; Name=DY305715; organism=Citrus sinensis; type=EST; length=1258bp
CTTTTTTCTCTCTCCTTCTTTCTGTTTCTTCTCTTTTTTTTGATGTTTTC
ATTTTCTTGATAACATGGAGTTGCAGCTGCAACGACATAGAAAGTTCATA
AAATATTCAATCAACGAGGCAGCAACGGCAGATATATGTCCATCATATTG
TGACTTATCTGATACATCAAGCTTTTGTAGCCCACCATGTTTAACTTCTT
GTCCAAGCTACTGCCACAATTTTTTGCAATCCCTAATCCCTACTCCCAGT
CCAGTGACATTCAAATATCATATTCATCACAAATCTCGCAAGTTCTTGAT
CATTACAGCCTCAGCTCTGGTTACAACGATTGTTGCAGTTTTATGTTATG
TTGTTTTTGTTAAGTTCTATTTAAGAAGGAGATCATCATCGGAGCCGCGA
ATACTAAACGAAACCCATGATGATTTTCTTGATGAGGATCATGGCCCTGT
GGTTGATCACCCAATCTGGTACATCAACACCGTTGGTCTGCAGTCATCGG
TCATTAGAGAGATCGCTGTTTTGAAGTATAAAAAAAGTGATGGTCTTGTT
GAAGGAACAGAGTGCTCTGTTTGCTTGAGTGAGTTTCAAGAAGATGAGAC
TCTAAGGCTTTTGCCAAAATGCAATCATGCTTTTCACATATCTTGTATTG
ACACCTGGCTTAGATCACACACCAATTGTCCATTGTGCCGTTCTCCTATT
GTCAAGATCAACCATGCAGCTAGAGCACCACCATCATCATCAACATGGGA
GTCGAATAATGAGGATTCAGGCACTAGAGAAAGTACCCAAGTGGGTATTT
TGACAGAAAATGGTGGTAGAAATGACATGGAGTCGGAAATTGGTGCCGTT
GAAAGGCGGAATATAACGAAAGAAATGATCAAGATTCTGATGACGAGATA
CAACAATAAGAAGATCAGTTTCCTTGGAATCCTTAACAGCCTCCAAGATG
AATCCTGCTCTTGGGAAATTTTGATCCTGGAAAAACTTACAAAAATTTCA
AAAAACCAGTTTGGGTAAAGAGAAAAAAATTTGAATGGTGGAAACTGGTT
CCCAAAAAAATTTGGAAAAAAATGGAAAGCTTGATTAAAACCCCTTTGTG
AAAAAGGGGCCCGGTGGTTACTTAAAAAAAAGGGTCGTTTATTCCCGGGG
GGGGGGCAAAATTTTCCTTTGTTTATAAAAAAAAAACAAGCCCCAAAAAA
CCCCAGGAGAAAAACCATTTTTTTTTTTTTTTTTTTCCCCAAAAAAATTA
AAACCCAC
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