DY305715
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL4A_ARATH (RING-H2 finger protein ATL4A OS=Arabidopsis thaliana GN=ATL4A PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.512e-13 Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 2 Query: 485 GLQSSVIREIAVLKYKKSDGLVEGT---ECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIV 703 GL + I+ Y ++ G+ G EC VCL+EF++DETLRL+P C H FH C+D WL + CP+CR+ +V Sbjct: 56 GLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDIWLSHSSTCPICRAKVV 131
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL3G_ARATH (RING-H2 finger protein ATL3G OS=Arabidopsis thaliana GN=ATL3G PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.512e-13 Identity = 38/83 (45.78%), Postives = 50/83 (60.24%), Query Frame = 2 Query: 485 GLQSSVIREIAVLKY-------KKSDGLVEGT---ECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIV 703 GL SVI+ + + Y K + G +C+VCL EF+E + +R LP C HAFH+ CID WLRSH NCPLCR+ I+ Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAIL 202
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL1L_ARATH (RING-H2 finger protein ATL1L OS=Arabidopsis thaliana GN=ATL1L PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.974e-13 Identity = 33/85 (38.82%), Postives = 53/85 (62.35%), Query Frame = 2 Query: 455 DHPIWYINTVGLQSSVIREIAVLKYKKSDGLVE-GTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVK 706 ++P+ NT G++ ++ + Y L TEC++CLSEF +E ++LLP C+H FH+ CID WL SH++CP CR +++ Sbjct: 95 NYPVRLTNT-GVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLIQ 178
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL4D_ARATH (Putative RING-H2 finger protein ATL4D OS=Arabidopsis thaliana GN=ATL4D PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.578e-13 Identity = 34/84 (40.48%), Postives = 49/84 (58.33%), Query Frame = 2 Query: 554 GTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKINHAARAPPSSSTWESNNEDSGTRESTQVGILT 805 G EC++CL EF+++E LR +P C+H FH +CID WL S + CP+CR+ + + P S E+ N G +ES LT Sbjct: 117 GVECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRANL-SLKSGDSFPHPSMDVETGNAQRGVQESPDERSLT 199
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL2J_ARATH (RING-H2 finger protein ATL2J OS=Arabidopsis thaliana GN=ATL2J PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 2.578e-13 Identity = 46/132 (34.85%), Postives = 63/132 (47.73%), Query Frame = 2 Query: 377 RRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKINHAARAPPSSSTWESNNEDSG 772 RR+SS R + + D H V PI +++V E +K + G ECSVCL F + + LR L +C HAFH+ CI+TWL+ H NCP+CR+ V + AP N SG Sbjct: 91 RRNSSSSRTSSSSDDT----PHATVDTPPI-------TETTVTSESGGKFHKDTHSKEIGNECSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICRTD-VSVKQQTEAPNVPVNVNGNVNRSG 210
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL2I_ARATH (RING-H2 finger protein ATL2I OS=Arabidopsis thaliana GN=ATL2I PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.578e-13 Identity = 50/171 (29.24%), Postives = 73/171 (42.69%), Query Frame = 2 Query: 182 PPCLTSCPSYCHNFLQSLIPTPSPVTFKYHIHHKSRKFLIITASALVTTIVAVLCYVVFVKFYLRRRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRS 694 PP + P Y L+ T F+Y I + I L+TTI Y R + SS P N+ H ++D GL I+ + Y ++ G + C++CL +++ LR LP CNH FH+ CIDTWLR + CP+CR+ Sbjct: 43 PPPPSEMPDY-----NGLLGTDDIGGFRYGIG------VSIGVLLLITTITLTSYYCT------RNQLSSSPSQTNQDSTRIHHHHHHVIIDV------VPGLDEDTIQSYPKILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCRT 190
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL1G_ARATH (RING-H2 finger protein ATL1G OS=Arabidopsis thaliana GN=ATL1G PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.578e-13 Identity = 47/163 (28.83%), Postives = 83/163 (50.92%), Query Frame = 2 Query: 314 ALVTTIVAVLCYVVFVKFYL--RRRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIV-KINHAARAPPSSSTWESNNEDSGTRESTQV 793 A + ++ +++ FYL RRSSS+ L F+ + ++ +GL + + ++ +K+S +++ ++CSVCL ++Q ++ L+ +P C H FH+ CID WL SHT CPLCR ++ + ++ P S + E S ES V Sbjct: 25 AFIFSVPICFTFIILFLFYLIYLRRSSSDLSSLG-MRTTFIPGNSLSTIE--------LGLSKELREMLPIVVFKESFTVMD-SQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHTTCPLCRLALIPSRSRQSQDDPVPSLVSPDEEVSSQPESEPV 177
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL2M_ARATH (RING-H2 finger protein ATL2M OS=Arabidopsis thaliana GN=ATL2M PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 3.367e-13 Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 2 Query: 395 PRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKK------SDGLVEG--TECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRS 694 PRI+ +D D + G VV VGL +VI + K SDG G T CS+CL E++E E LR++P+C H FH+ C+D WL+ + +CP+CR+ Sbjct: 83 PRIIFVAEEDNEDLEAGDVV---------VGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRN 181
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL5P_ARATH (RING-H2 finger protein ATL5P OS=Arabidopsis thaliana GN=ATL5P PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.398e-13 Identity = 38/86 (44.19%), Postives = 49/86 (56.98%), Query Frame = 2 Query: 434 EDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCR 691 +DH + D I + GL + I K + +D E CSVCL +FQ ET+R LP C+H FH+ CID WLR H +CPLCR Sbjct: 139 QDHTDIFDTAI----SKGLTGDSLNRIP--KVRITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCR 218
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL4L_ARATH (RING-H2 finger protein ATL4L OS=Arabidopsis thaliana GN=ATL4L PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 5.744e-13 Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 557 TECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKINHAARAPPSSSTWESNNED 766 TEC++C++EF E E +R+LP C+HAFH++CID WL S ++CP CR +V + R +ST E+ +D Sbjct: 111 TECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRILVPVK-CDRCGHHASTAETQVKD 179 The following BLAST results are available for this feature:
BLAST of DY305715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305715 ID=DY305715; Name=DY305715; organism=Citrus sinensis; type=EST; length=1258bpback to top |