DY305707

Overview
NameDY305707
Unique NameDY305707
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1248
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY305707 vs. ExPASy Swiss-Prot
Match: YH5B_SCHPO (Uncharacterized oxidoreductase C215.11c OS=Schizosaccharomyces pombe GN=SPBC215.11c PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.797e-12
Identity = 47/168 (27.98%), Postives = 87/168 (51.79%), Query Frame = -2 
Query:  300 EEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLDRGFFGGKAVVESVPLDSFLKFFPRFNGENLDRNKSIYFRIENLAKKYKCTSAQLALAWVLAQGDDVVPIPGTTKIKNLDDNIGSLTVKLTKEDLKEISDAVPTEE 803
            +EG I+++GLSE + D I+ A    P+ +VQ  ++L  R  E +++  C + GI  +P+ PL  G       +    LD+  K        +LDR+ S                 Q+AL+WVL +   ++PIPGT+K+ +L++N+ +  ++L+ E   ++ +   +E+
Sbjct:  157 KEGLIRHVGLSEVTVDDIKEAEQYFPVVSVQNLFNLVNRKNE-KVLEYCEQKGIAFIPWYPLASGALAKPGTI----LDAVSK--------DLDRSTS-----------------QIALSWVLQRSPVMLPIPGTSKVDHLEENVKAAGIQLSSEVFAKLDEEGKSED 294
[Close]
BLAST of DY305707 vs. ExPASy Swiss-Prot
Match: YP088_YEAST (Putative aryl-alcohol dehydrogenase YPL088W OS=Saccharomyces cerevisiae GN=YPL088W PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.823e-11
Identity = 55/194 (28.35%), Postives = 90/194 (46.39%), Query Frame = -2 
Query:  318 RWTHQFPIEETHWRNEKAVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLDRGFFGGKAVVESVPLDSF---LKFFPRFNGENLDR----NKSIYFRIENLAKKYKCTSAQLALAWVLAQGDDVVPIPGTTKIKNLDDNIGSLTVKLTKEDLKEISD 860
            R  H+ P++E        VE G ++YIG S       A        +      + Q  ++L  R+ E E++P  +   IG++P+ P  RG         + PL+     +K  P F   +LD      K I  R+E ++K  K + A L++AWVL +G    PI G      +D+ I +L V LT+E++K + +
Sbjct:  149 RLDHETPMKEIMKALNDVVEAGHVRYIGASSMLATEFAELQFTADKYGWFQFISSQSYYNLLYREDERELIPFAKRHNIGLLPWSPNARGML-------TRPLNQSTDRIKSDPTFKSLHLDNLEEEQKEIINRVEKVSKDKKVSMAMLSIAWVLHKG--CHPIVGLNTTARVDEAIAALQVTLTEEEIKYLEE 333
The following BLAST results are available for this feature:
BLAST of DY305707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
YH5B_SCHPO4.797e-1227.98Uncharacterized oxidoreductase C215.11c OS=Schizos... [more]
YP088_YEAST1.823e-1128.35Putative aryl-alcohol dehydrogenase YPL088W OS=Sac... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2AB03RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305707 ID=DY305707; Name=DY305707; organism=Citrus sinensis; type=EST; length=1248bp
CTCATTTCACAAATCGGGCACACTACATTTACATATATATATAGTACATC
GTAATGATCAAAGTTTACTCATGAAATTGTTCAGCATGAAATCATGTAGC
AATAGCTTGTAAACATATTTTCACATTTATCTGCCTTTATTTGTGTAAAA
TATGACATCCCCAGTTCCCAACCCCGAGTGATGATATGGGCAGCATCCAG
TAAATATTTTAAGTTCAAACCTCAACAGTCTCTTCGAGGTGTGGTTGCAA
AGTTCCACGATGTTTTGTCAAGAGCATCTGGGTATCTGTCTCCTGCAACC
TCTTCTGTGGGTACGGCATCAGAAATTTCTTTCAGATCCTCTTTTGTAAG
TTTTACTGTCAAGGAGCCAATATTGTCGTCCAGGTTCTTAATCTTAGTTG
TCCCGGGAATAGGTACGACATCATCCCCCTGTGCGAGAACCCATGCCAGT
GCTAATTGAGCAGAAGTGCATTTGTACTTTTTGGCAAGGTTCTCTATGCG
AAAATAAATACTCTTGTTTCTGTCCAGGTTCTCTCCGTTGAACCGAGGAA
AAAATTTCAAAAAGCTATCTAAAGGCACACTTTCCACAACAGCTTTACCA
CCGAAAAATCCACGATCAAGAGGACAGTATGGAACTATTCCAATGCCAAG
CTCCCTGCAAAGTGGTACTATCTCATTCTCAATGTCACGAGCCCAAAGGG
ACCATTCCAGCTGTACAGCTGTGATGGGATGAACAGCATGTGCTCTCCTA
ATTGTATCTGGGCTAGCCTCAGATAATCCTATGTACTTGATTTTACCCTC
TTCCACCGCTTTTTCATTTCGCCAATGGGTTTCCTCTATGGGAAACTGAT
GGGTCCACCTCTATGTTGAATAGTACAGATCAAAATATTCCAAATCAAGG
GCGCCTCAAACTAACCTTCACAACAGAACGGCCAATAACCCGGGGGAACC
CTTCCAAAATCCAAAAAATAAAATCCCAATTCCAAAAACCCCAAACTTGG
GGGGCCCCTTGGAAGGTTTTCCCCAAGGGAACCCCCTTCACCCCCTTTTC
AAAAAAAAAATTTTATTAATAATAGGGGCCCAAATTTTACAACCGGGTGG
CCAAAAAAAAGGAATTCCCTTTTATGGAAAAACCGGGGCTTTATTAATTA
AGAAAAACCCCCCCCCCCTTTCTCCAAAAAAAAGGGGGAGAAAAAAAATT
ATAAAACAACCCCCCCCTCCCACCCGCGGGCCCCCCACGGGCGCCCTC
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