EY702617

Overview
NameEY702617
Unique NameEY702617
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF_MAIZE (ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 7.304e-16
Identity = 40/48 (83.33%), Postives = 44/48 (91.67%), Query Frame = 1 
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANKA 159
            MNAAEITDKLGL+SLR  H YIQSTCAT+GEGLYEGLDWLS+NIA K+
Sbjct:  134 MNAAEITDKLGLNSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIATKS 181
[Close]
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF3_TAKRU (ADP-ribosylation factor 3 OS=Takifugu rubripes GN=arf3 PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.055e-14
Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 1 
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANK 156
            MNAAEITDKLGLHSLR  + YIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:  134 MNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180
[Close]
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF3_RAT (ADP-ribosylation factor 3 OS=Rattus norvegicus GN=Arf3 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.055e-14
Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 1 
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANK 156
            MNAAEITDKLGLHSLR  + YIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:  134 MNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180
[Close]
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF3_PONAB (ADP-ribosylation factor 3 OS=Pongo abelii GN=ARF3 PE=2 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.055e-14
Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 1 
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANK 156
            MNAAEITDKLGLHSLR  + YIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:  134 MNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180
[Close]
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF3_MOUSE (ADP-ribosylation factor 3 OS=Mus musculus GN=Arf3 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.055e-14
Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 1 
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANK 156
            MNAAEITDKLGLHSLR  + YIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:  134 MNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180
[Close]
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF3_HUMAN (ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.055e-14
Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 1 
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANK 156
            MNAAEITDKLGLHSLR  + YIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:  134 MNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180
[Close]
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF3_BOVIN (ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE=2 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.055e-14
Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 1 
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANK 156
            MNAAEITDKLGLHSLR  + YIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:  134 MNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180
[Close]
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF2_RAT (ADP-ribosylation factor 2 OS=Rattus norvegicus GN=Arf2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.055e-14
Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 1 
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANK 156
            MNAAEITDKLGLHSLR  + YIQ+TCATSG+GLYEGLDWLSN + N+
Sbjct:  134 MNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKNQ 180
[Close]
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF2_MOUSE (ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.055e-14
Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 1 
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANK 156
            MNAAEITDKLGLHSLR  + YIQ+TCATSG+GLYEGLDWLSN + N+
Sbjct:  134 MNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKNQ 180
[Close]
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF2_BOVIN (ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.055e-14
Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 1 
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANK 156
            MNAAEITDKLGLHSLR  + YIQ+TCATSG+GLYEGLDWLSN + N+
Sbjct:  134 MNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKNQ 180
The following BLAST results are available for this feature:
BLAST of EY702617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ARF_MAIZE7.304e-1683.33ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 S... [more]
ARF3_TAKRU1.055e-1478.72ADP-ribosylation factor 3 OS=Takifugu rubripes GN=... [more]
ARF3_RAT1.055e-1478.72ADP-ribosylation factor 3 OS=Rattus norvegicus GN=... [more]
ARF3_PONAB1.055e-1478.72ADP-ribosylation factor 3 OS=Pongo abelii GN=ARF3 ... [more]
ARF3_MOUSE1.055e-1478.72ADP-ribosylation factor 3 OS=Mus musculus GN=Arf3 ... [more]
ARF3_HUMAN1.055e-1478.72ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 ... [more]
ARF3_BOVIN1.055e-1478.72ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE... [more]
ARF2_RAT1.055e-1478.72ADP-ribosylation factor 2 OS=Rattus norvegicus GN=... [more]
ARF2_MOUSE1.055e-1478.72ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 ... [more]
ARF2_BOVIN1.055e-1478.72ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-010-B07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702617 ID=EY702617; Name=EY702617; organism=Citrus sinensis; type=EST; length=558bp
AGATCTTCCATACCCATGAATGCTGCAGAGATCACTGATAAGCTTGGTCT
TCACTCACTTCGTCTTTTCCACCGGTACATCCAGAGCACATGTGCAACAT
CTGGGGAAGGACTCTATGAGGGTCTGGACTGGCTCTCCAACAACATCGCT
AACAAGGCTTAATTGATTGGTCAAGTCTGAGCGACTCTTTGCGGCAGCAT
CTATGTGAATGATGTTACTATGCTTTTGTTTATTTTGTCGGGGATTCTTT
TTGGGCTTTACTACCTACGTTCAGAAAAATGTATTTGTTTGTGTTAGATA
TTTGATTGGCACCATACTATAAAGTTTTCTGCATTGTCATTGTAGAGCTT
AAATTACCCTCATTATTCAGAATTCAATGATTTTTTGGCTGTTATACCTC
TTAGCTTCTCTTTAGTCTGCAGCGGTGCAGATATACTTTAATCACCAATA
ATTGGCTTATTGATTTGATCTTAATATTGTTCTCAATGTCAGTTTGTATG
TATCTTTTGATTACNGCAAACAGAACTCGAATATTACCTCCGTAATGACC
CTCTTTCA
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