EY702617

Overview
NameEY702617
Unique NameEY702617
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF1_SCHPO (ADP-ribosylation factor 1 OS=Schizosaccharomyces pombe GN=arf1 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 5.234e-14
Identity = 36/47 (76.60%), Postives = 41/47 (87.23%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANK 156
            MNAAEITDKLGLHSLR    YIQ+TCATSG+GLYEGL+WLS N+ N+
Sbjct:  134 MNAAEITDKLGLHSLRHRQWYIQATCATSGDGLYEGLEWLSTNLKNQ 180          
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF2_YEAST (ADP-ribosylation factor 2 OS=Saccharomyces cerevisiae GN=ARF2 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 1.523e-13
Identity = 35/48 (72.92%), Postives = 43/48 (89.58%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANKA 159
            M+AAEIT+KLGLHS+R    +IQSTCATSGEGLYEGL+WLSNN+ N++
Sbjct:  134 MSAAEITEKLGLHSIRNRPWFIQSTCATSGEGLYEGLEWLSNNLKNQS 181          
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF_ASHGO (ADP-ribosylation factor OS=Ashbya gossypii GN=ARF1 PE=3 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 1.989e-13
Identity = 35/48 (72.92%), Postives = 42/48 (87.50%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANKA 159
            M+AAEIT+KLGLHS+R    YIQ+TCATSGEGLYEGL+WLS N+ N+A
Sbjct:  134 MSAAEITEKLGLHSIRQRPWYIQATCATSGEGLYEGLEWLSTNLKNQA 181          
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF_DUGJA (ADP-ribosylation factor OS=Dugesia japonica PE=2 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 2.598e-13
Identity = 35/48 (72.92%), Postives = 40/48 (83.33%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANKA 159
            MN AEITDKLGLHSLR    YIQ+TCATSG+GLYEGLDWLS  + N++
Sbjct:  134 MNPAEITDKLGLHSLRNRSWYIQATCATSGDGLYEGLDWLSTTLKNRS 181          
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF_CRYNE (ADP-ribosylation factor OS=Cryptococcus neoformans GN=ARF PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13
Identity = 35/48 (72.92%), Postives = 40/48 (83.33%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANKA 159
            MNAAEITDKLGLHSLR    YIQ+ CATSG+GLYEGL+WLS N+  K+
Sbjct:  134 MNAAEITDKLGLHSLRQRSWYIQAACATSGDGLYEGLEWLSANLKRKS 181          
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF1_DICDI (ADP-ribosylation factor 1 OS=Dictyostelium discoideum GN=arfA PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 1.684e-12
Identity = 33/48 (68.75%), Postives = 39/48 (81.25%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANKA 159
            M+ AE+TDKL LHSLR    YIQSTCATSG+GLYEGLDWLSN + + +
Sbjct:  134 MSVAEVTDKLNLHSLRSRKWYIQSTCATSGDGLYEGLDWLSNTLTSSS 181          
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF1_YEAST (ADP-ribosylation factor 1 OS=Saccharomyces cerevisiae GN=ARF1 PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 2.199e-12
Identity = 33/46 (71.74%), Postives = 41/46 (89.13%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIAN 153
            M+AAEIT+KLGLHS+R    +IQ+TCATSGEGLYEGL+WLSN++ N
Sbjct:  134 MSAAEITEKLGLHSIRNRPWFIQATCATSGEGLYEGLEWLSNSLKN 179          
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF_NEUCR (ADP-ribosylation factor OS=Neurospora crassa GN=NCU08340 PE=3 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 8.357e-12
Identity = 33/48 (68.75%), Postives = 39/48 (81.25%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANKA 159
            MNAAEITDKLGL SLR    YIQ+TCAT+G+GL+EGLDWLS  +  K+
Sbjct:  137 MNAAEITDKLGLSSLRQRSWYIQATCATTGDGLFEGLDWLSTELKKKS 184          
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF2_DROME (ADP-ribosylation factor 2 OS=Drosophila melanogaster GN=Arf102F PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 7.074e-11
Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNIANK 156
            M AAE+TDKL L+ LR  H +IQSTCAT G GLYEGLDWLS  +A K
Sbjct:  134 MTAAELTDKLRLNQLRNRHWFIQSTCATQGHGLYEGLDWLSAELAKK 180          
BLAST of EY702617 vs. ExPASy Swiss-Prot
Match: ARF_CANAL (ADP-ribosylation factor OS=Candida albicans GN=ARF1 PE=3 SV=4)

HSP 1 Score: 66.6254 bits (161), Expect = 9.239e-11
Identity = 29/44 (65.91%), Postives = 38/44 (86.36%), Query Frame = 1
Query:   16 MNAAEITDKLGLHSLRLFHRYIQSTCATSGEGLYEGLDWLSNNI 147
            MNAAEIT+K+GLHS+     +IQ+TCAT+G+GLYEGL+WLSN +
Sbjct:  134 MNAAEITEKMGLHSIMNRPWFIQATCATTGDGLYEGLEWLSNQV 177          
The following BLAST results are available for this feature:
BLAST of EY702617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ARF1_SCHPO5.234e-1476.60ADP-ribosylation factor 1 OS=Schizosaccharomyces p... [more]
ARF2_YEAST1.523e-1372.92ADP-ribosylation factor 2 OS=Saccharomyces cerevis... [more]
ARF_ASHGO1.989e-1372.92ADP-ribosylation factor OS=Ashbya gossypii GN=ARF1... [more]
ARF_DUGJA2.598e-1372.92ADP-ribosylation factor OS=Dugesia japonica PE=2 S... [more]
ARF_CRYNE4.431e-1372.92ADP-ribosylation factor OS=Cryptococcus neoformans... [more]
ARF1_DICDI1.684e-1268.75ADP-ribosylation factor 1 OS=Dictyostelium discoid... [more]
ARF1_YEAST2.199e-1271.74ADP-ribosylation factor 1 OS=Saccharomyces cerevis... [more]
ARF_NEUCR8.357e-1268.75ADP-ribosylation factor OS=Neurospora crassa GN=NC... [more]
ARF2_DROME7.074e-1168.09ADP-ribosylation factor 2 OS=Drosophila melanogast... [more]
ARF_CANAL9.239e-1165.91ADP-ribosylation factor OS=Candida albicans GN=ARF... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-010-B07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702617 ID=EY702617; Name=EY702617; organism=Citrus sinensis; type=EST; length=558bp
AGATCTTCCATACCCATGAATGCTGCAGAGATCACTGATAAGCTTGGTCT
TCACTCACTTCGTCTTTTCCACCGGTACATCCAGAGCACATGTGCAACAT
CTGGGGAAGGACTCTATGAGGGTCTGGACTGGCTCTCCAACAACATCGCT
AACAAGGCTTAATTGATTGGTCAAGTCTGAGCGACTCTTTGCGGCAGCAT
CTATGTGAATGATGTTACTATGCTTTTGTTTATTTTGTCGGGGATTCTTT
TTGGGCTTTACTACCTACGTTCAGAAAAATGTATTTGTTTGTGTTAGATA
TTTGATTGGCACCATACTATAAAGTTTTCTGCATTGTCATTGTAGAGCTT
AAATTACCCTCATTATTCAGAATTCAATGATTTTTTGGCTGTTATACCTC
TTAGCTTCTCTTTAGTCTGCAGCGGTGCAGATATACTTTAATCACCAATA
ATTGGCTTATTGATTTGATCTTAATATTGTTCTCAATGTCAGTTTGTATG
TATCTTTTGATTACNGCAAACAGAACTCGAATATTACCTCCGTAATGACC
CTCTTTCA
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