EY702607

Overview
NameEY702607
Unique NameEY702607
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TPSD4_ABIGR (Delta-selinene synthase OS=Abies grandis GN=ag4 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.742e-27
Identity = 68/187 (36.36%), Postives = 110/187 (58.82%), Query Frame = 2
Query:   68 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESG-----PDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVESHVL----DLPNKHAVAY 601
            +  +A  FT  YL + +A H    + D+ L   VK+ALE P H  + R EAR F+++Y         ++N  +L+LAK+D+NI+Q  H +++++++RWW+ +G+ + LNF R R VE + W V  IFEP+F   R   A    L T++DD+YD + TL E+++ T+ V    L    DLP+   +A+
Sbjct:  184 VMEEAKAFTREYLNQVLAGHGDVTDVDQSLLREVKYALEFPWHCSVPRWEARSFLEIYGHNHSWLKSNINQKMLKLAKLDFNILQCKHHKEIQFITRWWRDSGISQ-LNFYRKRHVEYYSWVVMCIFEPEFSESRIAFAKTAILCTVLDDLYDTHATLHEIKIMTEGVRRWDLSLTDDLPDYIKIAF 369          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: AMS1_ARTAN (Amorpha-4,11-diene synthase OS=Artemisia annua GN=AMS1 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 6.384e-27
Identity = 64/164 (39.02%), Postives = 98/164 (59.76%), Query Frame = 2
Query:   68 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE 559
            I  DA+ FT + L   + K     N    L T ++ AL+ PL  R+ R+EA  +I  Y+     N  LL+LAK+++N++Q++H E+L +V +WWK   + +     RDR+VE +FW +G  +EPQ+   R        ++TLIDD YD YGT +EL++FT+AVE
Sbjct:  159 ILEDALGFTRSRLSI-MTKDAFSTNPA--LFTEIQRALKQPLWKRLPRIEAAQYIPFYQQQDSHNKTLLKLAKLEFNLLQSLHKEELSHVCKWWKAFDIKKNAPCLRDRIVECYFWGLGSGYEPQYSRARVFFTKAVAVITLIDDTYDAYGTYEELKIFTEAVE 319          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TPSD5_ABIGR (Gamma-humulene synthase OS=Abies grandis GN=ag5 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.422e-26
Identity = 71/187 (37.97%), Postives = 112/187 (59.89%), Query Frame = 2
Query:   68 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVY-----ESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE----SHVLDLPNKHAVAY 601
            +  +A  FTT YLK+ +A  +   + DE L   VK+ALE P H  ++R EAR FI+++     E   +++  +LELAK+D+NI+Q  H ++L+ +SRW+  + +   LNF R   VE +FW    I EP+F   R     +  L+T++DD+YD +GTLD+L++FT+ V     S V  LP+   +A+
Sbjct:  197 VMEEAKAFTTNYLKKVLAGREAT-HVDESLLGEVKYALEFPWHCSVQRWEARSFIEIFGQIDSELKSNLSKKMLELAKLDFNILQCTHQKELQIISRWFADSSIAS-LNFYRKCYVEFYFWMAAAISEPEFSGSRVAFTKIAILMTMLDDLYDTHGTLDQLKIFTEGVRRWDVSLVEGLPDFMKIAF 381          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.138e-26
Identity = 68/167 (40.72%), Postives = 92/167 (55.09%), Query Frame = 2
Query:   68 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKH---ALELPLHWRMRRLEARWFIDVYESGPDM-NPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAV 556
            I  +A  FT  YL+             E    L +H   ALE P H  + RLEAR FID+YE+  +  N  LLE AK+DYN VQ +H ++L   S+WWK   L   + +ARDR+ E FFW V   FEP + + R + A V  L++LIDD  D Y T++E  +  +AV
Sbjct:  217 ILEEAFAFTKDYLQSSAV---------ELFPNLKRHITNALEQPFHSGVPRLEARKFIDLYEADIECRNETLLEFAKLDYNRVQLLHQQELCQFSKWWKDLNLASDIPYARDRMAEIFFWAVAMYFEPDYAHTRMIIAKVVLLISLIDDTIDAYATMEETHILAEAV 374          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: ECS1_ARTAN (Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25
Identity = 62/164 (37.80%), Postives = 96/164 (58.54%), Query Frame = 2
Query:   68 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE 559
            I  DA+ FT   L E +AK+    N    + + ++ AL  PLH R+ RLEA  +I  Y+     +  LL+LAK+ +N +Q++H ++L  +S+WWK   +   L +AR+R VE +FW +   FEPQ+   R   +    + T +DD YD YGT +ELE FT+A++
Sbjct:  159 ILDDALVFTRTCLDE-IAKNPSLSNSA--VSSQIREALTQPLHKRLPRLEALRYIPFYQQQASHSETLLKLAKLGFNQLQSLHKKELSIISKWWKSFDVANNLPYARNRPVECYFWALAVYFEPQYSESRVFLSRFFSIQTFLDDTYDAYGTYEELEQFTEAIQ 319          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TPSD2_PICAB (Isopimaradiene synthase, chloroplastic OS=Picea abies GN=TPS-ISO PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.019e-24
Identity = 64/154 (41.56%), Postives = 95/154 (61.69%), Query Frame = 2
Query:  167 VKHALELPLHWRMRRLEARWFIDVYESGPD---------MNPIL-----LELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVESHVLDLPNK 586
            V++AL+ P H  M RLEAR +I+ Y  GP+         M P +     LELAK+D+N VQ++H ++L+ + RWWK +GL E L F R+RV E +F     IFEP+F  CR +   ++    ++DD+YD +GTLD LELF++ V+   L L ++
Sbjct:  498 VEYALKYPWHRSMPRLEARSYIEHY--GPNDVWLGKTMYMMPYISNLKYLELAKLDFNHVQSLHQKELRDLRRWWKSSGLSE-LKFTRERVTEIYFSAASFIFEPEFATCRDVYTKISIFTVILDDLYDAHGTLDNLELFSEGVKRWDLSLVDR 648          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TPSD1_GINBI (Levopimaradiene synthase, chloroplastic OS=Ginkgo biloba GN=LPS PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24
Identity = 67/177 (37.85%), Postives = 107/177 (60.45%), Query Frame = 2
Query:   68 IFRDAIRFTTAYLKEWVAKHD-IDK-NDDEYLCTLVKHALELPLHWRMRRLEARWFID------------VYESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAV 556
            I  +A  FTT +L+  +AK++  DK    + L   V++A++ P H  M RLEAR +I+            VY+     N   LELAK+D+N+VQA+H ++ +++  WW+++G  + L F R R VE +F     +FEP+F  CR   A  +CL  ++DD+YD +G+LD+L+LF++AV
Sbjct:  468 IMEEAKTFTTNHLQNALAKNNAFDKWAVKKDLPGEVEYAIKYPWHRSMPRLEARSYIEQFGSNDVWLGKTVYKMLYVSNEKYLELAKLDFNMVQALHQKETQHIVSWWRESGFND-LTFTRQRPVEMYFSVAVSMFEPEFAACRIAYAKTSCLAVILDDLYDTHGSLDDLKLFSEAV 643          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TPSDV_ABIGR (Abietadiene synthase, chloroplastic OS=Abies grandis GN=ag22 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.873e-24
Identity = 63/151 (41.72%), Postives = 91/151 (60.26%), Query Frame = 2
Query:  167 VKHALELPLHWRMRRLEARWFIDVYESGPD--------------MNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVESHVLDL 577
            V++AL+ P H  M RLEAR +I+ Y  GPD               N   LELAK+D+N VQ+IH  +L+ + RWWK +G  + LNF R+RV E +F     IFEP+F  CR +    +    ++DD+YD +G+LD+L+LFT++V+   L L
Sbjct:  500 VEYALKYPWHKSMPRLEARSYIENY--GPDDVWLGKTVYMMPYISNEKYLELAKLDFNKVQSIHQTELQDLRRWWKSSGFTD-LNFTRERVTEIYFSPASFIFEPEFSKCREVYTKTSNFTVILDDLYDAHGSLDDLKLFTESVKRWDLSL 647          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TASY_TAXBR (Taxadiene synthase OS=Taxus brevifolia GN=TDC1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.058e-24
Identity = 67/173 (38.73%), Postives = 101/173 (58.38%), Query Frame = 2
Query:   77 DAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESG-----------PDM-NPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE 559
            DA +F   YL+E +A   I  N    L   +++ +E P H  + RLEAR +ID Y+             P + N   LELAK+D+NIVQ++H E+LK ++RWWK++G+ + +NF R RV E +F +    FEP++   R     + CL  L DD+ D++ TLDEL+ FT+ V+
Sbjct:  467 DARKFAEPYLREALATK-ISTNTK--LFKEIEYVVEYPWHMSIPRLEARSYIDSYDDNYVWQRKTLYRMPSLSNSKCLELAKLDFNIVQSLHQEELKLLTRWWKESGMAD-INFTRHRVAEVYFSSA--TFEPEYSATRIAFTKIGCLQVLFDDMADIFATLDELKSFTEGVK 633          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TASY_TAXBA (Taxadiene synthase OS=Taxus baccata GN=TDC1 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.628e-24
Identity = 66/173 (38.15%), Postives = 101/173 (58.38%), Query Frame = 2
Query:   77 DAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESG-----------PDM-NPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE 559
            DA +F   YL++ +A   I  N   Y    +++ +E P H  + RLEAR +ID Y+             P + N   LELAK+D+NIVQ++H E+LK ++RWWK++G+ + +NF R RV E +F +    FEP++   R     + CL  L DD+ D++ TLDEL+ FT+ V+
Sbjct:  467 DARKFAEPYLRDALATK-ISTNTKLY--KEIEYVVEYPWHMSIPRLEARSYIDSYDDDYVWQRKTLYRMPSLSNSKCLELAKLDFNIVQSLHQEELKLLTRWWKESGMAD-INFTRHRVAEVYFSSA--TFEPEYSATRIAFTKIGCLQVLFDDMADIFATLDELKSFTEGVK 633          
The following BLAST results are available for this feature:
BLAST of EY702607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
TPSD4_ABIGR3.742e-2736.36Delta-selinene synthase OS=Abies grandis GN=ag4 PE... [more]
AMS1_ARTAN6.384e-2739.02Amorpha-4,11-diene synthase OS=Artemisia annua GN=... [more]
TPSD5_ABIGR1.422e-2637.97Gamma-humulene synthase OS=Abies grandis GN=ag5 PE... [more]
CASS_RICCO4.138e-2640.72Casbene synthase, chloroplastic OS=Ricinus communi... [more]
ECS1_ARTAN2.682e-2537.80Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=... [more]
TPSD2_PICAB1.019e-2441.56Isopimaradiene synthase, chloroplastic OS=Picea ab... [more]
TPSD1_GINBI1.331e-2437.85Levopimaradiene synthase, chloroplastic OS=Ginkgo ... [more]
TPSDV_ABIGR3.873e-2441.72Abietadiene synthase, chloroplastic OS=Abies grand... [more]
TASY_TAXBR5.058e-2438.73Taxadiene synthase OS=Taxus brevifolia GN=TDC1 PE=... [more]
TASY_TAXBA8.628e-2438.15Taxadiene synthase OS=Taxus baccata GN=TDC1 PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-010-A08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702607 ID=EY702607; Name=EY702607; organism=Citrus sinensis; type=EST; length=699bp
CCACGCGTCCGAAGGAATGTTAGCTCTGTATGAAGCTGCATACCTCCTGG
TAGAAGAAGAAAGCAGTATCTTTCGTGACGCTATAAGGTTCACCACCGCA
TATCTCAAAGAATGGGTGGCCAAGCATGATATTGACAAAAATGATGATGA
ATATCTTTGTACATTAGTGAAACATGCTTTGGAACTTCCACTACATTGGA
GGATGCGAAGATTGGAGGCAAGGTGGTTCATCGATGTATACGAAAGTGGA
CCAGACATGAACCCTATCTTGCTCGAGCTTGCTAAAGTTGACTATAATAT
TGTGCAAGCAATACACTAAGAGGATCTCAAATATGTGTCAAGGTGGTGGA
AGAAAACAGGACTTGGGGAGAAGTTGAATTTTGCAAGAGACAGAGTAGTG
GAGAATTTCTTCTGGACCGTGGGGGATATATTCGAACCTCAGTTTGGATA
TTGTAGAAGGATGTCTGCAATGGTTAATTGCCTTTTAACATTAATCGATG
ATGTTTATGATGTCTATGGGACCTTGGACGAACTTGAGCTATTCACTGAT
GCAGTTGAGAGTCATGTACTAGATCTCCCAAATAAACATGCAGTTGCGTA
CTATAAGACTCATGACTGTGGTCACCAAATCGTTCCTCCTCATAAATAAT
AAATATTATTTTAGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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