EY702607

Overview
NameEY702607
Unique NameEY702607
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9723 contig Csv1_Contig9723:228..926. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TPSD1_PICAB (Levopimaradiene synthase, chloroplastic OS=Picea abies GN=TPS-LAS PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.304e-23
Identity = 60/154 (38.96%), Postives = 92/154 (59.74%), Query Frame = 2
Query:  167 VKHALELPLHWRMRRLEARWFIDVYESGPD--------------MNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVESHVLDLPNK 586
            V++AL+ P H  M RLEAR +I+ Y  GP+               N   LELAK+D+N VQ++H ++L+ + RWW  +G  E L F R+RV E +F     +FEP+F  CR +    +    ++DD+YD +GTLD+L+LF+D+V+   L L ++
Sbjct:  490 VEYALKYPWHRSMPRLEARSYIEHY--GPNDVWLGKTMYMMPYISNEKYLELAKLDFNHVQSLHQKELRDLRRWWTSSGFTE-LKFTRERVTEIYFSPASFMFEPEFATCRAVYTKTSNFTVILDDLYDAHGTLDDLKLFSDSVKKWDLSLVDR 640          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TASY_TAXCH (Taxadiene synthase OS=Taxus chinensis GN=TDC1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.304e-23
Identity = 65/173 (37.57%), Postives = 100/173 (57.80%), Query Frame = 2
Query:   77 DAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESG-----------PDM-NPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE 559
            DA +F   YL++ +A   I  N    L   +++ +E P H  + R EAR +ID Y+             P + N   LELAK+D+NIVQ++H E+LK ++RWWK++G+ + +NF R RV E +F +    FEP++   R     + CL  L DD+ D++ TLDEL+ FT+ V+
Sbjct:  467 DARKFAEPYLRDALATK-ISTNTK--LFKEIEYVVEYPWHMSIPRSEARSYIDSYDDDYVWERKTLYRMPSLSNSKCLELAKLDFNIVQSLHQEELKLLTRWWKESGMAD-INFTRHRVAEVYFSSA--TFEPEYSATRIAFTKIGCLQVLFDDMADIFATLDELKSFTEGVK 633          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TPSD1_PINTA (Levopimaradiene synthase, chloroplastic OS=Pinus taeda GN=LPS PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21
Identity = 58/151 (38.41%), Postives = 87/151 (57.62%), Query Frame = 2
Query:  167 VKHALELPLHWRMRRLEARWFIDVYESGPD--------------MNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVESHVLDL 577
            V++AL+ P H  M RLEAR +I+ Y  GP+               N   LELAK+D+N VQ  H ++L+ + RWW  +G  + L F R+RV E +F     +FEP+F  CR +    +    ++DD+YD +GTLD L+LF+++V+   L L
Sbjct:  481 VEYALKYPWHRSMPRLEARSYIENY--GPNDVWLGKTMYMMPNISNEKYLELAKLDFNRVQFFHRQELQDIRRWWNSSGFSQ-LGFTRERVAEIYFSPASFLFEPEFATCRAVYTKTSNFTVILDDLYDAHGTLDNLKLFSESVKRWDLSL 628          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TPSD2_ABIGR (Myrcene synthase, chloroplastic OS=Abies grandis GN=ag2 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.836e-21
Identity = 62/170 (36.47%), Postives = 95/170 (55.88%), Query Frame = 2
Query:   68 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYES------GPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE 559
            +  +A  F+T YLKE + K  +     E     +K  +E   H  + RLEAR +ID  E         +    LLELAK+++NI  ++  ++L+Y+ RWWK++ L  KL FAR R VE +        +P+    R   A +  L+T++DD+YD +GT+DELELFT A++
Sbjct:  235 VMEEAEIFSTRYLKEALQKIPVSALSQE-----IKFVMEYGWHTNLPRLEARNYIDTLEKDTSAWLNKNAGKKLLELAKLEFNIFNSLQQKELQYLLRWWKESDL-PKLTFARHRHVEFYTLASCIAIDPKHSAFRLGFAKMCHLVTVLDDIYDTFGTIDELELFTSAIK 398          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TPSD6_ABIGR (Camphene synthase, chloroplastic OS=Abies grandis GN=ag6 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20
Identity = 62/167 (37.13%), Postives = 94/167 (56.29%), Query Frame = 2
Query:   68 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVY---ESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE 559
            +  +A  F+T YL+E + K          L   ++  LE   H  + RLEAR ++DV+       +    LLELAK+++NI  ++   +LK+VSRWWK +G  E + F R R VE +       FEPQ    R     ++ L+T++DD+YDV+GT+DELELFT  ++
Sbjct:  228 VMDEAETFSTKYLREALQKIPASS----ILSLEIRDVLEYGWHTNLPRLEARNYMDVFGQHTKNKNAAEKLLELAKLEFNIFHSLQERELKHVSRWWKDSGSPE-MTFCRHRHVEYYALASCIAFEPQHSGFRLGFTKMSHLITVLDDMYDVFGTVDELELFTATIK 389          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TPSDB_ABIGR (Limonene/alpha-pinene synthase, chloroplastic OS=Abies grandis GN=ag11 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 68/201 (33.83%), Postives = 104/201 (51.74%), Query Frame = 2
Query:   68 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVY-----ESGPDMNPI----LLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE----SHVLDLPNKHAVAYYKTHDCGHQI 631
            +  +A  F+ +YLKE + K  +     E     +++ LE   H  + RLEAR +IDVY     ES  +M  +    LL+LAK+++NI  ++  ++L+Y+SRWWK +     L F R R VE +        EP+    R        LLT++DD+YD +GTLDEL+LFT A +    S    LP      Y   + C +++
Sbjct:  242 VMEEAEIFSASYLKEVLQKIPVSSFSRE-----IEYVLEYGWHTNLPRLEARNYIDVYGQDSYESSNEMPYVNTQKLLKLAKLEFNIFHSLQQKELQYISRWWKDS-CSSHLTFTRHRHVEYYTMASCISMEPKHSAFRLGFVKTCHLLTVLDDMYDTFGTLDELQLFTTAFKRWDLSETKCLPEYMKAVYMDLYQCLNEL 436          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TPSDA_ABIGR (Limonene synthase, chloroplastic OS=Abies grandis GN=ag10 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20
Identity = 66/202 (32.67%), Postives = 107/202 (52.97%), Query Frame = 2
Query:   68 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESG--------PDMN-PILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVESHVLD----LPNKHAVAYYKTHDCGHQIV 634
            +  +A  F+ +YLK+ + K  +     E     +++ LE   H  + RLEAR +I+VYE          P MN   LL+LAK+++NI  ++   +L+ +SRWWK++G   +L F R R VE +         P+    R     V  L+T++DD+YD +GT++EL+LFTDA++   L     LP      Y   + C +++V
Sbjct:  242 VMEEAEIFSASYLKKVLQKIPVSNLSGE-----IEYVLEYGWHTNLPRLEARNYIEVYEQSGYESLNEMPYMNMKKLLQLAKLEFNIFHSLQLRELQSISRWWKESG-SSQLTFTRHRHVEYYTMASCISMLPKHSAFRMEFVKVCHLVTVLDDIYDTFGTMNELQLFTDAIKRWDLSTTRWLPEYMKGVYMDLYQCINEMV 437          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TPSD8_ABIGR (Beta-phellandrene synthase, chloroplastic OS=Abies grandis GN=ag8 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19
Identity = 63/176 (35.80%), Postives = 95/176 (53.98%), Query Frame = 2
Query:   68 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPIL-------------LELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAV 556
            +  +A  F++ YLKE V K  +     E     + + LE   H  M RLE R ++DV+  G   +P L             LELAK+++NI  ++  ++L+Y+SRWW  +GL E L F R R VE +  +     EP+    R   A    L+T++DD+YD +GT+DE+ELF +AV
Sbjct:  233 VMEEAEIFSSRYLKEAVQKIPVSSLSQE-----IDYTLEYGWHTNMPRLETRNYLDVF--GHPTSPWLKKKRTQYLDSEKLLELAKLEFNIFHSLQQKELQYLSRWWIHSGLPE-LTFGRHRHVEYYTLSSCIATEPKHSAFRLGFAKTCHLITVLDDIYDTFGTMDEIELFNEAV 400          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: BARS_ARATH (Alpha-barbatene synthase OS=Arabidopsis thaliana GN=BS PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18
Identity = 55/166 (33.13%), Postives = 91/166 (54.82%), Query Frame = 2
Query:   68 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKL--NFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE 559
            I  +A+ FT  +L+         +    ++  L+++AL +P H  ++ L AR +I  YE   D +  LL+LAK+++  +Q  + ++LK ++ WW K      L  NF R+R VE +F  +   FEPQF   R MSA +  ++T +DD  D YG++ E+E   D +E
Sbjct:  169 ILDEALSFTLNHLESLATGR---RASPPHISKLIQNALHIPQHRNIQALVAREYISFYEHEEDHDETLLKLAKLNFKFLQLHYFQELKTITMWWTKLDHTSNLPPNF-RERTVETWFAALMMYFEPQFSLGRIMSAKLYLVITFLDDACDTYGSISEVESLADCLE 330          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TPSD3_ABIGR (Pinene synthase, chloroplastic OS=Abies grandis GN=ag3 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.425e-18
Identity = 62/166 (37.35%), Postives = 90/166 (54.22%), Query Frame = 2
Query:   68 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPD------MNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFT 547
            I  +A  F+T YLKE + K  +     E     +   LE   H  + RLEAR +I V+    +       +  LLELAK+++NI Q++   +L+ + RWWK++G  E + F R R VE +       FEPQ    R   A    L+T++DD+YD +GT+DELELFT
Sbjct:  236 IMDEAEIFSTKYLKEALQKIPVSSLSRE-----IGDVLEYGWHTYLPRLEARNYIQVFGQDTENTKSYVKSKKLLELAKLEFNIFQSLQKRELESLVRWWKESGFPE-MTFCRHRHVEYYTLASCIAFEPQHSGFRLGFAKTCHLITVLDDMYDTFGTVDELELFT 395          
The following BLAST results are available for this feature:
BLAST of EY702607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
TPSD1_PICAB7.304e-2338.96Levopimaradiene synthase, chloroplastic OS=Picea a... [more]
TASY_TAXCH7.304e-2337.57Taxadiene synthase OS=Taxus chinensis GN=TDC1 PE=2... [more]
TPSD1_PINTA1.055e-2138.41Levopimaradiene synthase, chloroplastic OS=Pinus t... [more]
TPSD2_ABIGR6.836e-2136.47Myrcene synthase, chloroplastic OS=Abies grandis G... [more]
TPSD6_ABIGR1.166e-2037.13Camphene synthase, chloroplastic OS=Abies grandis ... [more]
TPSDB_ABIGR1.989e-2033.83Limonene/alpha-pinene synthase, chloroplastic OS=A... [more]
TPSDA_ABIGR2.598e-2032.67Limonene synthase, chloroplastic OS=Abies grandis ... [more]
TPSD8_ABIGR2.199e-1935.80Beta-phellandrene synthase, chloroplastic OS=Abies... [more]
BARS_ARATH1.091e-1833.13Alpha-barbatene synthase OS=Arabidopsis thaliana G... [more]
TPSD3_ABIGR1.425e-1837.35Pinene synthase, chloroplastic OS=Abies grandis GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-010-A08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702607 ID=EY702607; Name=EY702607; organism=Citrus sinensis; type=EST; length=699bp
CCACGCGTCCGAAGGAATGTTAGCTCTGTATGAAGCTGCATACCTCCTGG
TAGAAGAAGAAAGCAGTATCTTTCGTGACGCTATAAGGTTCACCACCGCA
TATCTCAAAGAATGGGTGGCCAAGCATGATATTGACAAAAATGATGATGA
ATATCTTTGTACATTAGTGAAACATGCTTTGGAACTTCCACTACATTGGA
GGATGCGAAGATTGGAGGCAAGGTGGTTCATCGATGTATACGAAAGTGGA
CCAGACATGAACCCTATCTTGCTCGAGCTTGCTAAAGTTGACTATAATAT
TGTGCAAGCAATACACTAAGAGGATCTCAAATATGTGTCAAGGTGGTGGA
AGAAAACAGGACTTGGGGAGAAGTTGAATTTTGCAAGAGACAGAGTAGTG
GAGAATTTCTTCTGGACCGTGGGGGATATATTCGAACCTCAGTTTGGATA
TTGTAGAAGGATGTCTGCAATGGTTAATTGCCTTTTAACATTAATCGATG
ATGTTTATGATGTCTATGGGACCTTGGACGAACTTGAGCTATTCACTGAT
GCAGTTGAGAGTCATGTACTAGATCTCCCAAATAAACATGCAGTTGCGTA
CTATAAGACTCATGACTGTGGTCACCAAATCGTTCCTCCTCATAAATAAT
AAATATTATTTTAGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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