EY702607

Overview
NameEY702607
Unique NameEY702607
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: GBIS2_ARATH ((Z)-gamma-bisabolene synthase 2 OS=Arabidopsis thaliana GN=TPS13 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18
Identity = 55/165 (33.33%), Postives = 92/165 (55.76%), Query Frame = 2
Query:   68 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKL-NFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE 559
            I  +A+ FT+++LK  +    +      ++  L+++ L LP  W M  + AR +I  YE   D + +LL LAK+++ ++Q  + ++LK   +WW + GL  K  +  R+R+VE +   +   FEPQF   R ++A  N LLT++DD  D Y ++ EL    D VE
Sbjct:  166 ILDEALEFTSSHLKSLL----VGGMCRPHILRLIRNTLYLPQRWNMEAVIAREYISFYEQEEDHDKMLLRLAKLNFKLLQLHYIKELKTFIKWWMELGLTSKWPSQFRERIVEAWLAGLMMYFEPQFSGGRVIAAKFNYLLTILDDACDHYFSIPELTRLVDCVE 326          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: GBIS1_ARATH ((Z)-gamma-bisabolene synthase 1 OS=Arabidopsis thaliana GN=TPS12 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.074e-18
Identity = 55/165 (33.33%), Postives = 92/165 (55.76%), Query Frame = 2
Query:   68 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKL-NFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE 559
            I  +A++FT+++LK  +A          ++  L+++ L LP  W M  + AR +I  YE   D + +LL LAK+++ ++Q  + ++LK   +WW + GL  K  +  R+R+VE +   +   FEPQF   R ++A  N LLT++DD  D Y ++ EL      VE
Sbjct:  166 ILDEALKFTSSHLKSLLAGGTCRP----HILRLIRNTLYLPQRWNMEAVIAREYISFYEQEEDHDKMLLRLAKLNFKLLQLHYIKELKSFIKWWMELGLTSKWPSQFRERIVEAWLAGLMMYFEPQFSGGRVIAAKFNYLLTILDDACDHYFSIHELTRLVACVE 326          
BLAST of EY702607 vs. ExPASy Swiss-Prot
Match: TPSD9_ABIGR (Terpinolene synthase, chloroplastic OS=Abies grandis GN=ag9 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.249e-14
Identity = 61/170 (35.88%), Postives = 92/170 (54.12%), Query Frame = 2
Query:   68 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVY-ESGPD----MN-PILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCR-RMSAMVNC-LLTLIDDVYDVYGTLDELELFTDA 553
            +  +A  F+  YLKE +    +     E     +++ LE      M RLE R +IDV  E+  D    MN   LLE+AK+++NI  ++   +LK +SRWWK +G    L F+R R VE  F+ +    E    +   R+     C L+T++DD+YD +GT++ELELFT A
Sbjct:  238 VMEEAEIFSKIYLKEALQNIAVSSLSRE-----IEYVLEDGWQTNMPRLETRNYIDVLGENDRDETLYMNMEKLLEIAKLEFNIFHSLQQRELKDLSRWWKDSGFSH-LTFSRHRHVE--FYALASCIETDRKHSGFRLGFAKMCHLITVLDDIYDTFGTMEELELFTAA 399          
The following BLAST results are available for this feature:
BLAST of EY702607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
GBIS2_ARATH3.176e-1833.33(Z)-gamma-bisabolene synthase 2 OS=Arabidopsis tha... [more]
GBIS1_ARATH7.074e-1833.33(Z)-gamma-bisabolene synthase 1 OS=Arabidopsis tha... [more]
TPSD9_ABIGR1.249e-1435.88Terpinolene synthase, chloroplastic OS=Abies grand... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-010-A08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702607 ID=EY702607; Name=EY702607; organism=Citrus sinensis; type=EST; length=699bp
CCACGCGTCCGAAGGAATGTTAGCTCTGTATGAAGCTGCATACCTCCTGG
TAGAAGAAGAAAGCAGTATCTTTCGTGACGCTATAAGGTTCACCACCGCA
TATCTCAAAGAATGGGTGGCCAAGCATGATATTGACAAAAATGATGATGA
ATATCTTTGTACATTAGTGAAACATGCTTTGGAACTTCCACTACATTGGA
GGATGCGAAGATTGGAGGCAAGGTGGTTCATCGATGTATACGAAAGTGGA
CCAGACATGAACCCTATCTTGCTCGAGCTTGCTAAAGTTGACTATAATAT
TGTGCAAGCAATACACTAAGAGGATCTCAAATATGTGTCAAGGTGGTGGA
AGAAAACAGGACTTGGGGAGAAGTTGAATTTTGCAAGAGACAGAGTAGTG
GAGAATTTCTTCTGGACCGTGGGGGATATATTCGAACCTCAGTTTGGATA
TTGTAGAAGGATGTCTGCAATGGTTAATTGCCTTTTAACATTAATCGATG
ATGTTTATGATGTCTATGGGACCTTGGACGAACTTGAGCTATTCACTGAT
GCAGTTGAGAGTCATGTACTAGATCTCCCAAATAAACATGCAGTTGCGTA
CTATAAGACTCATGACTGTGGTCACCAAATCGTTCCTCCTCATAAATAAT
AAATATTATTTTAGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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