EY702597 | Citrus Genome Database

Overview


Name	EY702597
Unique Name	EY702597
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	871

Libraries


Library Name	Type
Sweet orange fruit, development stadium (2 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPAL (Ubiquitin OS=Lupinus albus PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.222e-30
Identity = 66/76 (86.84%), Postives = 68/76 (89.47%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV SSD +DNVKAKIQDKEGIPPDQQRL FA KQLEDGRTLADYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 95.5153 bits (236), Expect = 7.851e-27
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 46.595 bits (109), Expect = 7.851e-27
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVESSDTI
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_LINUS (Ubiquitin OS=Linum usitatissimum PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.222e-30
Identity = 66/76 (86.84%), Postives = 68/76 (89.47%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV SSD +DNVKAKIQDKEGIPPDQQRL FA KQLEDGRTLADYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 95.5153 bits (236), Expect = 7.851e-27
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 46.595 bits (109), Expect = 7.851e-27
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVESSDTI
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_HORVU (Ubiquitin OS=Hordeum vulgare GN=MUB1 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.222e-30
Identity = 66/76 (86.84%), Postives = 68/76 (89.47%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV SSD +DNVKAKIQDKEGIPPDQQRL FA KQLEDGRTLADYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 95.5153 bits (236), Expect = 7.851e-27
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 46.595 bits (109), Expect = 7.851e-27
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVESSDTI
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_HELAN (Ubiquitin OS=Helianthus annuus PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.222e-30
Identity = 66/76 (86.84%), Postives = 68/76 (89.47%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV SSD +DNVKAKIQDKEGIPPDQQRL FA KQLEDGRTLADYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 95.5153 bits (236), Expect = 7.851e-27
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 46.595 bits (109), Expect = 7.851e-27
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVESSDTI
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_DESAN (Ubiquitin OS=Deschampsia antarctica PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.222e-30
Identity = 66/76 (86.84%), Postives = 68/76 (89.47%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV SSD +DNVKAKIQDKEGIPPDQQRL FA KQLEDGRTLADYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 95.5153 bits (236), Expect = 7.851e-27
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 46.595 bits (109), Expect = 7.851e-27
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVESSDTI
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_DAUCA (Ubiquitin OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.222e-30
Identity = 66/76 (86.84%), Postives = 68/76 (89.47%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV SSD +DNVKAKIQDKEGIPPDQQRL FA KQLEDGRTLADYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 95.5153 bits (236), Expect = 7.851e-27
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 46.595 bits (109), Expect = 7.851e-27
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVESSDTI
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_BRARA (Ubiquitin OS=Brassica rapa PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.222e-30
Identity = 66/76 (86.84%), Postives = 68/76 (89.47%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV SSD +DNVKAKIQDKEGIPPDQQRL FA KQLEDGRTLADYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 95.5153 bits (236), Expect = 7.851e-27
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 46.595 bits (109), Expect = 7.851e-27
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVESSDTI
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_AVESA (Ubiquitin OS=Avena sativa PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.222e-30
Identity = 66/76 (86.84%), Postives = 68/76 (89.47%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV SSD +DNVKAKIQDKEGIPPDQQRL FA KQLEDGRTLADYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 95.5153 bits (236), Expect = 7.851e-27
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 46.595 bits (109), Expect = 7.851e-27
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVESSDTI
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_AVEFA (Ubiquitin OS=Avena fatua PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.222e-30
Identity = 66/76 (86.84%), Postives = 68/76 (89.47%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV SSD +DNVKAKIQDKEGIPPDQQRL FA KQLEDGRTLADYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 95.5153 bits (236), Expect = 7.851e-27
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 46.595 bits (109), Expect = 7.851e-27
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVESSDTI
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTI 23

[Close]

BLAST of EY702597 vs. ExPASy Swiss-Prot
Match: UBIQ_ASPOF (Ubiquitin OS=Asparagus officinalis PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.222e-30
Identity = 66/76 (86.84%), Postives = 68/76 (89.47%), Query Frame = 2

Query:  284 MQIFVKTLTGKTITLEVHSSDAVDNVKAKIQDKEGIPPDQQRLTFARKQLEDGRTLADYNLHKEVALHLVLPLRGG 511
            MQIFVKTLTGKTITLEV SSD +DNVKAKIQDKEGIPPDQQRL FA KQLEDGRTLADYN+ KE  LHLVL LRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 95.5153 bits (236), Expect = 7.851e-27
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 2

Query:  146 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 283
            QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 46.595 bits (109), Expect = 7.851e-27
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 1

Query:   55 MQIFVKTLTGKTITLEVESSDTI 123
            MQIFVKTLTGKTITLEVESSDTI
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTI 23

The following BLAST results are available for this feature:

BLAST of EY702597 vs. ExPASy Swiss-Prot

BLAST of EY702597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93


Match Name	E-value	Identity	Description
UBIQ_LUPAL	5.222e-30	86.84	Ubiquitin OS=Lupinus albus PE=3 SV=1	[more]
UBIQ_LINUS	5.222e-30	86.84	Ubiquitin OS=Linum usitatissimum PE=3 SV=1	[more]
UBIQ_HORVU	5.222e-30	86.84	Ubiquitin OS=Hordeum vulgare GN=MUB1 PE=3 SV=1	[more]
UBIQ_HELAN	5.222e-30	86.84	Ubiquitin OS=Helianthus annuus PE=3 SV=1	[more]
UBIQ_DESAN	5.222e-30	86.84	Ubiquitin OS=Deschampsia antarctica PE=2 SV=1	[more]
UBIQ_DAUCA	5.222e-30	86.84	Ubiquitin OS=Daucus carota PE=3 SV=1	[more]
UBIQ_BRARA	5.222e-30	86.84	Ubiquitin OS=Brassica rapa PE=3 SV=1	[more]
UBIQ_AVESA	5.222e-30	86.84	Ubiquitin OS=Avena sativa PE=1 SV=1	[more]
UBIQ_AVEFA	5.222e-30	86.84	Ubiquitin OS=Avena fatua PE=3 SV=1	[more]
UBIQ_ASPOF	5.222e-30	86.84	Ubiquitin OS=Asparagus officinalis PE=3 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-701-009-H06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY702597 ID=EY702597; Name=EY702597; organism=Citrus sinensis; type=EST; length=871bp
CCACGCGTCCGGAAGGAGTCATCCCTTCATCTCGTCCTCAGGCTCCGTGG
TGGTATGCAGATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGG
AGGTGGAGAGTTCGGATACGATTGATAGGCGGGGGGGGCAGGATCCAGGA
CAAAGAGGGGATCCCGCCGGACCAGCAAAGATTGATCTTCGCCGGTAAGC
AGTTGGAAGATGGCCGCACCTTGGCCGATTACAACATTCAGAAAGAGTCA
ACTCTCCACCTTGTTCTTCGTCTCAGGGGAGGCATGCAGATATTTGTTAA
GACCCTTACTGGGAAAACAATTACTTTGGAAGTTCATAGCTCAGACGCGG
TTGACAATGTCAAGGCAAAAATCCAAGATAAGGAAGGAATTCCACCGGAT
CAGCAGCGTTTGACCTTCGCTCGCAAACAGCTTGAGGATGGAAGGACTCT
TGCGGATTATAACCTCCACAAGGAGGTCGCCCTTCATCTGGTTCTGCCCC
TGAGGGGGGGTATGCAGATACTTGTCAAGACCCTTGACTGGGAAGACTAT
TACTCTGGAGGTGGAGAGCTCCGATACTATTGATAATGTTAAGGCAAAGA
TTCAGGACAACGAAGGGCATTCCCCCAGATCCAGAAAGGCTCATCTTTCC
TGGAAACCACCTTGAAGGAGGGCCGTCTTTACCTGATTATCACTTTCCCA
AGGGGCCCCCCCTCCCTCTTCGGGCTCCCCCTTCTTGGGGGTGAATTCCT
AAAAGGGTATCTCCCTTGGCCGCCGGGCCGCCTCCCCCCCGCCTGCACCC
AAAAATCTATTTTCCCTGCGGGCGCCCCCCGTCCTCTTCCAACTCTTTGC
CCCAAGCTTTACCGCGCAAAC